Pangasianodon hypophthalmus (striped catfish): 113537208
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Entry
113537208 CDS
T05759
Name
(RefSeq) protein transport protein Sec24C-like
KO
K14007
protein transport protein SEC24
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113537208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113537208
Membrane trafficking [BR:
phyp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
113537208
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
113537208
NCBI-ProteinID:
XP_026787404
LinkDB
All DBs
Position
Unknown
AA seq
893 aa
AA seq
DB search
MEIPASDPGYGHQQQTWEGWNGWDVITSPACPPTAFPTLSPPSGYHLHPSCAPQNGPAAM
GPTAVPESTVNSDLSQPVTAYWSPLQPHCNGVYKPVPDARSPAQTSLQGINSQPTSPISS
PKSESRYGLDPQLLPSVVQVMSEDRAQWEGKIFASEPQSSVPPLSSTSCTLEDRGNATAR
FIRCTSYSFPVEPQSAQQSHLPLSAIFCPLARPENEERPVPVCNAGECVKGCGVCGAFMS
PAMSWQDCGQRFYCPFCGKLTEVPWQSYQPTNKGQRVDREKRPELSLGSYEILETQKGDP
AVLLLAIDVTATAIRSGQLDFICQQLCTLLLSLDGGEDNAKADLRVGLITYDSRIHVYDL
SPTLSRPHMMVLTDTDELELPVQEGLLVPLKDCRHIVESILQQIPLIDVEMQDSSGSQDL
PVQAGLKILQAAECPGKLLVFHSSPLTERSEKQSSLAFFSSSKPKSVFQAPDSSASLAKA
CISQGCSVQLFVFSQPDVGGAWPGHIPFLTGGKLICYNSLQSELERERFRGDLWRSVDTD
MAYRAQLQVFVSKELRVSGCYGAFLAGPESHCVVMAALDWHTALAFEFTHSKSLDEKRGV
AIQAVLSYSGSRGEKRTRVHTVTLACSQSLMDTFRTSQAETLLTFYCKKMYCLALETSLQ
SLREELQIEITEALACYRKHCCTTSVSPGQLVMPQFLKTLPVYINSLRKSEVLLPGLRSS
VHQRLQLRSVTVSMDTRSTVAQLYPLVLPLLVNAEGDSVPSMDVALRCSASSLQSDGLYL
LYSPLTLILWVGSQVSHQALTQLFNTTSFLSLTSGEIKLPVLDNPLSVSLQKLISTLQSY
AAVTLKLKVVKEGDSCDECVQRLLVEDRSPNGGASYADFLFHLHVNSLRRVVE
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggagatccctgcttctgaccccggttatgggcaccagcagcagacatgggagggctgg
aatggctgggatgtaatcacatctccagcttgccctcctactgcatttcctactctttct
cctccgtctggttatcacctacacccgagctgtgcgcctcagaacggaccggctgctatg
ggtcctacggcagtgccagagagtacagtgaactcggacctttcacagccagtgacagcg
tactggtcccccctacagccacactgcaatggtgtatataagcctgtccctgatgccaga
agcccggcacagacgtcactacagggaatcaactcacagccgaccagtcctatatccagc
cctaaatccgagtcccgctatggtttggaccctcagctactacccagtgtcgtgcaggta
atgagtgaggacagggctcagtgggaggggaaaatatttgcatctgaaccccagtcctct
gtcccccctctctccagcacttcctgcacgctggaggacagaggtaatgcaactgctcga
tttatccgctgcacgtcctacagctttcctgttgagccccagtctgcacagcagagccac
ctgccactatcggccattttctgccccctggccagacctgagaatgaagagagaccagtg
ccagtgtgtaatgcaggggagtgtgttaagggctgtggtgtgtgtggtgccttcatgagt
cctgctatgagctggcaggactgtgggcaacgcttctactgccctttctgtggcaaactc
acagaagtgccctggcagtcatatcagcctacaaacaaggggcaacgagtcgaccgggag
aagaggccagagctcagtctgggctcatatgagatcctggaaacacaaaagggagatcct
gctgtgttgctcctggcaattgatgtcactgccactgcaataagatcaggacaactggac
ttcatctgtcagcagctttgtaccctacttctgtctttagatgggggagaagacaatgca
aaagcagatctgcgagttggtttgattacttatgacagtaggatccatgtctatgatctc
agtccgacattgtcccgcccccacatgatggtcctgaccgacacagatgagctggaactt
cctgtgcaggaggggcttctggtaccactcaaagactgcagacacattgtagagagcatt
ctacaacaaattccgctgattgatgttgagatgcaggacagttcaggctcccaagatctt
cctgttcaagccggactcaagatcctacaggctgcagagtgtcccgggaagctgttggtc
ttccattcttcacctcttactgagaggtcagagaagcaaagctccctggcattcttttct
tccagcaaaccaaagtcagtcttccaggcaccagactcttctgcatcactggctaaggca
tgtatcagtcaaggatgcagcgtccagctttttgtgttttcacagccagatgtgggtggg
gcttggcctgggcatatcccttttctcacagggggaaagcttatctgctacaacagccta
cagtctgagctggagagagagcgtttccgtggagatctgtggaggagcgtggacactgac
atggcctaccgagctcagcttcaagtttttgttagcaaagaattacgagtgtctggttgc
tacggcgctttccttgctggccctgaatcccactgtgttgtcatggcagcgcttgattgg
cacacagccctggcatttgagttcactcacagcaaatcacttgatgaaaaaagaggcgtg
gccatacaggccgtcctgtcctacagtggatccagaggagagaagaggacacgggtacac
actgttactctggcctgctctcagagtctgatggacacattcaggaccagccaggccgag
acgctgctcactttctactgcaaaaagatgtattgtttggcgttggagacatctctgcag
tctcttcgtgaggagctgcagattgagatcacagaagctttagcttgctacaggaaacat
tgctgcactacttctgtctcccctggacagctggtgatgcctcagtttctgaagactctc
cccgtctacattaacagtctgaggaagagtgaggttctcctcccgggtctgcgcagttct
gttcatcagcggctgcagctgcgcagcgtcaccgtctccatggatacacgcagcaccgtt
gctcagctgtacccactcgtcctgcctctgctggtgaatgctgagggagattctgtgccc
tccatggatgtggcattgcgctgctccgcctccagcctgcagtctgacggtctctacctg
ctctattccccgctgacgctgatactctgggtgggcagccaggtttcccatcaggcctta
acacaactcttcaacacaacctccttcttatcactgacatccggggagataaaacttccg
gtgctggataatcctctgtctgtcagtcttcagaaactcatcagcactttacagtcctat
gcagctgtgactcttaagttgaaggtggtgaaggaaggcgacagttgcgacgagtgtgtg
cagagactcctggtggaagacaggagtcctaacggaggcgcgtcctatgccgacttcctg
ttccaccttcatgtcaattctctgcgccgtgttgtggaatga
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