Pangasianodon hypophthalmus (striped catfish): 113537277
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Entry
113537277 CDS
T05759
Symbol
tfdp1
Name
(RefSeq) transcription factor Dp-1
KO
K04683
transcription factor Dp-1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03083
Polycomb repressive complex
phyp04110
Cell cycle
phyp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
113537277 (tfdp1)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
113537277 (tfdp1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
113537277 (tfdp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113537277 (tfdp1)
03036 Chromosome and associated proteins [BR:
phyp03036
]
113537277 (tfdp1)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
113537277 (tfdp1)
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
113537277 (tfdp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
113537277
NCBI-ProteinID:
XP_026787491
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MMARDGGLKETSGELKVFTTQNVSPGTGAVVSLVTVHPSSVTGVKQIMPKALGAPGVNVL
SHVVIGTPQRPTAPAGAALLTSPRTPSAQFLTPQTHTRESSPWSSGRSSRRGDKNGKGLR
HFSMKVCEKVQKKGVTSYNEVADELVTELSSGDNISPNESHVYDQKNIRRRVYDALNVLM
AMNIISKDKKEIKWIGFPTNSAQECKELEAERQRRLERIKQKQSQLQELILQQIAFKRLV
QRNREAEQKNHRPPPNTVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNMFEIHDDIE
VLKRMGMAFGLESGKCTPENLKIARTLVPKALEPYVTDMAQGIHKQPNGGYSRTNSDNGA
VATVASSSNSSYHGSSRDTPASFLEDEEEEDDEDDEDFDDDDDED
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaagagatggtggcctcaaagaaaccagtggagagctgaaggtttttaccact
cagaacgtgagtcctggaacaggtgctgtggtgtctctcgtgactgtccatccttcttct
gtcaccggagtgaagcagataatgcctaaagcgctcggtgcccctggcgttaatgtgctt
tcacatgtggtgatcggcactcctcagaggcccactgctcctgctggtgctgctctatta
accagccccagaactcccagtgctcagttcctcacaccacagacacacacgcgagagtct
tcgccctggtccagtggacgcagcagtagaagaggggacaagaatgggaaaggcttgaga
catttctccatgaaggtatgcgagaaggttcagaagaaaggtgtaacctcctataatgag
gtcgcagacgagctggtgactgagctgagttctggagacaacatctctcccaatgaatcc
catgtttatgaccagaagaacattcggaggcgggtatatgatgcactaaatgtcctaatg
gcgatgaacatcatctccaaagacaagaaggaaatcaaatggatcggcttcccaaccaat
tctgctcaggagtgcaaggaactggaggctgagcgccagagacgacttgaaagaatcaag
cagaaacagtcccagcttcaagagcttatactacagcaaatagccttcaagcgcctagtg
caaaggaatcgcgaggcagagcagaagaaccacagacctcctcccaatacggtcatccac
ctccccttcatcattgtgaacaccagcaagaagacagtcatcgactgcagcatctcaaat
gacaagtttgaatacctgtttaactttgacaacatgtttgagatccacgatgacatcgag
gtgctgaagcgcatgggcatggcgtttgggctcgagtcaggcaaatgtacgccagaaaat
ctgaagatagcccggacccttgtacctaaagctctggaaccgtatgtaacagatatggca
cagggcatccacaaacagcccaatggaggctattctcgtacaaacagtgataacggagct
gttgccactgtggcctccagctccaacagctcataccatggcagctctcgtgatactcca
gcatccttcctggaagacgaggaggaggaggatgatgaggatgacgaggactttgatgat
gacgatgatgaagattaa
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