Pangasianodon hypophthalmus (striped catfish): 113537324
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Entry
113537324 CDS
T05759
Symbol
pus10
Name
(RefSeq) putative tRNA pseudouridine synthase Pus10 isoform X1
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phyp03016
]
113537324 (pus10)
Enzymes [BR:
phyp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
113537324 (pus10)
Transfer RNA biogenesis [BR:
phyp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
113537324 (pus10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Shisa_N
Motif
Other DBs
NCBI-GeneID:
113537324
NCBI-ProteinID:
XP_026787541
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MHDRDFCPFMMLSLKDKDRPVIRKLLAAGCCGRCILRFCCVGKYSSYQQSCEDIHKELLA
FLGEDDGEQSHDASGEAETGDPPCKKMKLGSPQPSSGENASAEGVSEPKAQSGVCVACVG
VLQHFCDQSYAKQVSEVVRKGEYQFDSLMLAVSLPAQLSVREHSCWLHIKKEVKEKSMCL
DKEDVVQVKDAFKWAVQGLVGKELGASVLTNSAFEVSVGFAHPETDGDCHFLATECPDCF
KPTKNKASVFTRMAVVKALEKISDTKFLRHYPCPPVSPSSQCTPLETTCLRASVFIAGRY
NKFSRELPQTPWVIDGERRMEGSVEELIANPLLSAFKADGFNFCSSGREDVDVRTLGNGR
PFAIELLNPHRAKFNKAEMRQLQETINTSSDKIRVRDLQIVTREATSRMKVGEEEKTKSY
SALIWTQKPITPADLDFLENIKELKIDQKTPLRVLHRRPLAIRQRLIHSMSASYLDTHHF
TLQLRTQAGTYIKEFVHGDFGRTKPNLGALMEAEVDILELDVESVDVDWPPAVPE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacagagatttctgtcccttcatgatgctgtcacttaaagataaagaccgtcca
gtcatcaggaagctgttggctgccggctgctgtggaagatgcatcctcagattctgttgt
gtgggaaagtattcttcatatcagcagtcctgtgaggacatacataaagagcttttagcg
ttcctcggcgaggacgatggcgagcaatcccatgatgcttcaggagaggcagagacaggg
gacccgccatgtaagaaaatgaagctgggttcacctcagccatcgtcaggagagaatgcg
agcgcggagggtgtgtcagagccgaaagcgcagtcaggggtgtgtgtggcgtgtgtcggg
gtcctgcagcacttctgcgatcagagttacgccaaacaggtgtcggaggtcgtgagaaaa
ggcgagtaccagttcgacagtctgatgttggccgtctctcttcctgctcagctgtccgtc
agagagcattcctgctggttgcacatcaagaaggaagtcaaggagaagagcatgtgtctg
gataaggaggacgtggttcaggtgaaggacgcctttaaatgggccgtacagggactggtg
ggcaaagagctgggagcatcggtactcactaacagtgcatttgaggtcagcgtgggtttt
gcgcatccagaaacagatggagattgccacttcctggctacagagtgtccggattgcttc
aagccgacgaagaataaagcttctgtgttcactaggatggcggtggtgaaggcgctggag
aagatctcagatacaaagttcctcagacattacccgtgtccacctgtctcaccctctagc
cagtgcactccactagagaccacatgcctgcgcgcatctgtctttatagcagggaggtat
aataagttctcacgggagcttcctcagaccccctgggtgatagacggagagagacgcatg
gagggatcggtggaggagttgatcgccaatcctctgctgtccgccttcaaagcagatggt
tttaacttctgctcatccgggagagaagacgtggatgtacggactttaggaaatggacgt
ccgtttgccatcgagcttctgaatccacacagagcgaagtttaacaaagctgaaatgaga
caacttcaggagacgatcaacacgtcctctgacaaaatccgagtccgagacctgcaaatc
gtaaccagagaagctacaagtcgtatgaaagtaggagaagaggaaaagaccaagtcctac
agcgccctcatctggacacaaaagcctataactccagccgatctggactttttggaaaac
atcaaggagctgaagatcgatcagaagaccccactccgagtcctccatcgcaggccgctt
gccatcagacagagactcatccactccatgagcgcgagctacctggatacacatcacttc
acactgcagctgcgcacccaggcagggacatacattaaagagtttgtgcatggagacttc
ggccggacgaagcccaacctcggtgccctcatggaggcagaggtggacattctggagctg
gacgtggagtcggtggatgtggactggcctcctgctgtaccagagtga
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