KEGG   Pangasianodon hypophthalmus (striped catfish): 113537344
Entry
113537344         CDS       T05759                                 
Symbol
ercc5
Name
(RefSeq) DNA repair protein complementing XP-G cells
  KO
K10846  DNA excision repair protein ERCC-5
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    113537344 (ercc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:phyp03400]
    113537344 (ercc5)
DNA repair and recombination proteins [BR:phyp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     113537344 (ercc5)
SSDB
Motif
Pfam: XPG_N XPG_I fvmX3-analog 5_3_exonuc
Other DBs
NCBI-GeneID: 113537344
NCBI-ProteinID: XP_026787572
LinkDB
Position
Unknown
AA seq 1115 aa
MGVHGLWKLLESTGKPINPETLEGKILAVDISIWLNQAVKGVRDRDGNNVHNAHLLTLFH
RLCKLLFFRIRPVFVYDGDAPLLKRQTLAIRRQRKEEMALESKQTHEKLLRTFLKRQAIR
AALGDRSKETIPSISSVRRDEVDEMYVLPALPPVEEKERSSSDEESERDEAQTQEPYLKF
EDEIYENPNSIDINSEEFQLLSPEIKHEILKDMKEFSKRRRTLYHKPPERSGDFSQYQLA
GLLQRNNLNQRLEGVEKEMSQRRCGAVEEEYGQGEEHDVESRRLISEDSSHYILIKGSQK
SKQTSESHPAPDPWSCGPWSRKGRHKGRPDPLWRPISDGIPDENEPSSSSSSSTTPKPII
CSEEQPSDGAPPSPRTLQAIQAAMMDSSSDEDELASRKTVQDGSGTASSQEGNGGVSPRT
LQAIQRAMMEDNNVSEDHCKEVQTQQQKYVIVSSSDDDDDDDQTESTVMERNVLCEAREG
GGVSPQTLLAIQRALGEKESFTGMKLGENVGFLSSSEVEKMEEVVGVRSKEFKAATLNME
EEHKKGALKTASSPSDLQSDEDTLPQDHEPRYNSENNFLQKGSLSINLTEEKEERNGQIV
VKREEEDSSSEEGFIEVSEGEEVSEMDNSVTRSEEQLPELSNKEEVVGSDKEESQEKESN
DTTLSLNNSKMEEQEAESPRETTTVLAPSEWDNIDMEELVQLEKNLQAEQSSLRGQQQQQ
QRSAATVTGQMCQESQELLRLFGVPFIVAPMEAEAQCAALDRTDQTHGTITDDSDVWLFG
GRHVYKNFFNSNKYVEHYQYFDIQNQLGLDRTKLINLAYLLGSDYTEGIPGVGCVTGMEI
LNEFPGPGLESLTYFSKWWNEAQTNKKLAADPKDTKVKKKLRALNLHPGFPNPAVAEAYL
QPTVDQSEGSFCWGRPQLDLLKEFCYSRFGWNSKKTEETLQPVLKQLSTQQTQLRIDSFF
RLEQQERQAIRSQRLRRAVICLKRKERDGADNEAESSEDEKISPVKKGKNAKEKGTDVTP
AGMFGGGFIGLDMSSNSPEEKMIVGKDEKQPKTVKSEPLKVKSSSSSSSSSSSEDELEHK
NRATMVIAQSVFEGKTRGRGRRGGRGGRGKTKKNL
NT seq 3348 nt   +upstreamnt  +downstreamnt
atgggagttcatggcctgtggaagttactggagagcacaggaaagcccatcaacccggaa
acactcgaggggaagatcctagcagtcgatatcagcatctggctaaaccaagcagtcaag
ggggtgcgggatcgtgatggcaacaacgtccataatgcccaccttcttaccttgtttcac
cgtctgtgcaagttgcttttcttccgcatcaggcctgtctttgtttacgatggagatgca
cctctgcttaaaagacagaccctggctatcaggagacagaggaaggaggagatggctctc
gagtccaagcaaacccatgagaaactcttgagaacgtttctgaagaggcaggccatcaga
gctgcactaggggaccgcagtaaagagacaattcccagtatttcttctgtgcgaagagat
gaggtggatgaaatgtacgttttaccagcactgcctcctgtagaggaaaaagaaagaagc
agttctgacgaagaatcagaaagagatgaggcacagacacaagagccctatctcaaattt
gaggatgaaatttatgaaaatcccaattccatagacataaactcagaggagttccagctc
ttgtcaccagagatcaaacatgagattctcaaagatatgaaggagttcagcaagagaaga
cgcaccctttatcacaaacctcctgagaggtcaggggacttctctcagtatcagctggca
gggctgctgcagaggaataacctgaaccaacgtctagagggtgtggagaaagaaatgagc
cagcgcagatgtggagctgtggaggaggagtacggccagggtgaagagcacgacgttgag
tcgcgccgtctcatatcagaggattcttcacactatatactcatcaaagggtcccaaaag
agcaaacagacttctgagagccatccagccccagatccctggtcttgtggcccttggtca
aggaaagggagacacaaaggaaggccagaccctctttggcggccaatatcagatggcatt
cctgatgaaaacgagccttcttcttcctcttcttcatcgacaactccaaaaccaatcatt
tgtagtgaggaacagccttcagatggagcgcctccatccccacgaacccttcaggccatt
caggcagccatgatggacagcagctcggatgaagacgaattggcctctaggaaaactgtc
caagatggaagtggaacagcaagttctcaagaaggaaatggtggtgtatcacctcgcact
ttgcaggccattcagagggccatgatggaggacaataatgtatctgaagaccactgcaaa
gaagttcaaactcagcagcagaagtatgtcattgtcagtagttcagatgatgatgatgat
gatgatcaaacagaaagcacagtgatggaaaggaacgtcttgtgtgaggctcgggaagga
ggtggagtttctcctcagactttactggccattcagagagccttaggagaaaaggagtca
tttactgggatgaagctgggggagaatgtgggtttcttgagcagttctgaagtagaaaaa
atggaagaggtagttggagtgaggagcaaggagttcaaagctgctacacttaatatggaa
gaagaacataaaaaaggtgccctaaaaacagcttcctccccctcagatctacagtccgat
gaggacactttgccccaagatcatgaaccacgttataattctgaaaacaatttcctgcag
aaaggaagtttgagcattaacttaaccgaggagaaggaggagagaaatgggcaaatcgtc
gtaaagcgtgaagaggaggacagcagctctgaagaaggtttcatcgaggtttcagaaggg
gaagaggtgtctgaaatggataattcagtaaccagatcagaagaacaattaccagaattg
agtaataaagaggaggtggtggggagtgataaagaggagagccaagagaaagagtcaaat
gacacaactctgtcattaaacaacagtaaaatggaagagcaagaagctgaaagccctcga
gaaacaaccactgttctggcacccagtgaatgggacaacattgacatggaggagctggta
cagctggagaaaaatcttcaggcagagcagagcagcctgcgcgggcaacagcagcagcag
cagcgcagcgctgctacagttacaggacagatgtgccaggaaagccaggagctgttgcgg
ttgttcggtgtgcccttcattgttgccccaatggaagctgaagctcagtgtgcagctttg
gacaggacggaccagacgcatggcaccatcactgacgacagtgacgtctggctgttcgga
ggacgacacgtctacaaaaacttcttcaatagcaacaaatatgtggaacactaccagtat
tttgatatccaaaaccagctaggactggacaggactaagctgatcaatctggcctatcta
ctgggtagtgattacaccgaagggatcccaggagtcggatgcgtcactggcatggaaata
ttaaacgagttccctgggcctggtttagaatctctcacatacttcagtaagtggtggaac
gaagctcaaaccaataagaagctggcagctgatcctaaggacacaaaggtgaagaaaaag
ctaagagccttgaatcttcatccaggcttccccaaccctgctgtcgctgaggcctacctc
cagcccactgtggaccaatcagagggctccttttgctggggccgcccacagctggatctc
ctcaaagagttttgttatagtcgatttggttggaacagcaagaagactgaagaaactctt
cagccagtattaaaacagctcagcactcaacagactcagctgcgcatcgattccttcttc
cgtctggagcagcaggagaggcaggccatccgcagccagcgcttacgtcgagctgtcatc
tgcctcaagaggaaggagcgcgatggggcagacaatgaagcagagagcagtgaagatgaa
aagatctcaccagtcaagaaagggaagaatgccaaagagaaaggaactgatgttacgcct
gcagggatgtttgggggaggttttattgggttggacatgagttctaacagtccagaagag
aagatgattgtgggcaaagatgagaaacagcctaaaacagtaaagagtgagccgttgaaa
gtcaaatccagcagcagcagcagcagtagcagtagttcagaagatgaactcgaacataag
aatagagccactatggttatcgcacagtctgtatttgaggggaaaacaagaggaagggga
agaagaggtgggcgaggaggaagaggaaagaccaagaaaaacttatga

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