Pangasianodon hypophthalmus (striped catfish): 113537364
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Entry
113537364 CDS
T05759
Symbol
jag1
Name
(RefSeq) protein jagged-1 isoform X1
KO
K06052
jagged-1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04330
Notch signaling pathway
phyp04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
113537364 (jag1)
04371 Apelin signaling pathway
113537364 (jag1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
phyp04090
]
113537364 (jag1)
CD molecules [BR:
phyp04090
]
Proteins
113537364 (jag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
EGF_TEN
JAG1
DSL
EGF_DL_JAG
EGF_2
EGF_Teneurin
JAG1-like_EGF2
EGF_3
EGF_CA
Yip1
Motif
Other DBs
NCBI-GeneID:
113537364
NCBI-ProteinID:
XP_026787602
LinkDB
All DBs
Position
Unknown
AA seq
1221 aa
AA seq
DB search
MRRRSSTFTAAACVHLLIHCFCMKLCEASGHFELRVLSVRNINGELQSGSCCDGTRNTAD
NNRCTRDECDTYFRLCLKEYQSRVTPGGPCSFGSGSTPVIGGNVVSPKSLAENDKARIVL
SFSFAWPRSYTLIVEALDFNNDSSTGSSSGQVIERAMQSGMINPSRQWQTLKHNGAVAQF
EYQIRVTCDDHYYGFGCNKFCRPRDDFFGHYNCDHNGNKTCLEGWASPECSTAICKQGCS
TKHGSCKAPGECRCLYGWQGEYCDQCIPHPGCVHGTCEEPWQCLCDTNWGGQLCDKDLNT
CGTRQPCLNGGTCSNTGPDKYHCACPEGYSGQNCERADNACLSEPCLNGGRCMESSQGFE
CQCAPGWTGPTCAINKDDCSPNLCNHGGTCVDLVNGFKCICPAQWIGKTCLIDADECAEN
PCVNAHVCRNLIGGYFCECLPGWTGPNCDINVNDCQGQCLNGGSCKDLVNGYKCVCAPGF
TGDHCEKDIDECASQPCLNKGQCRDDVNGFQCLCLPGFSGNLCQLDIDYCEGNPCQNGAP
CFNLATDYYCKCPEDYEGKNCSHLKDHCRTTPCEVIDSCTVAVVSNSTPGNVRYISSNVC
GPHGQCRSLAGGHFSCECQEGFTGTYCHENINDCESSPCRNGGTCIDKVNVYQCICADGW
EGPDCKTNIDDCSTNPCHDRGVCRDLVNDFYCECKNGWKGKTCHSRESQCDETTCNNGGT
CYDEGDSFKCMCASGWEGTSCNIAKNSSCLPNPCENGATCVVSGDRFTCVCKEGWEGLTC
SQNSNDCNPHPCYNSGTCVDGDNWYRCECAAGFAGPDCRININECQSSPCAFGATCVDEI
NGYRCLCPTGRTGARCQEVNRLPCMDSGRIVADGARWDKDCNTCYCHNSRITCTKLLCGP
RPCRLVGAGRGDCPAGQSCVPVQEDRCFVRPCPTQGECWSGQTTPIQSRCPPESDCANVT
FTFTKDIMPQGVTVEQVCRELRSLYVVKNLSSEFSISITCEPSTTASSEIHVAIQVSDDS
GSSHAPVKGITDRIIDVVSKRSANGTILTAIAEVRVQHRPPGSSNDYLVPVLVSVATVIW
ALALAWTALWCVRRRRKQNASATATGYTSAPSAAPTAEDNNAANNARENLHQIKNRIEKN
AVSAKIGQQKLPPQETAVPEDDPDTEKRLHKARFPRRPVYAPVECDERPGSLHGKRAHWT
NKRDNRDLESQNSLHRMEYIV
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgcggagacggagctccactttcaccgccgccgcctgcgttcatctcctgatacactgc
ttctgcatgaagctgtgtgaagcatcaggccactttgagttgcgtgtgctgtcagtcagg
aacatcaacggggagctgcagagcggctcgtgctgcgacggcacacgaaacacagcggac
aacaacagatgcacgcgggacgagtgtgacacgtatttccgcctgtgccttaaggagtac
cagtccagggtgacccccggtgggccgtgcagttttggcagtggatctactccggtgatc
ggtgggaacgttgtgtcacccaagagcttggcggaaaacgacaaggctcgcatcgtgctg
tctttcagcttcgcctggccgaggtcatacacactgatcgtggaggccttggacttcaac
aacgactcaagcactggcagtagcagtggccaggtgatcgagagggccatgcagtcgggg
atgatcaacccgagccgacagtggcagaccctgaaacacaacggtgccgtggcccagttc
gagtatcagatccgtgtcacttgcgacgaccactactacggcttcggctgcaacaaattc
tgccggccgcgagacgacttcttcggccactataactgtgaccacaatggcaacaagaca
tgcttggagggctgggctagccccgaatgcagcaccgcgatctgtaagcaaggctgtagc
actaaacatggatcctgtaaggcgcctggcgagtgcaggtgtttgtatgggtggcagggg
gagtactgtgatcagtgtatcccacaccccggctgtgtgcatggtacctgtgaggaaccc
tggcagtgtctctgtgacaccaactggggaggacagctctgtgacaaagacttaaacacg
tgtggcacgcggcagccgtgtctgaacggaggcacatgcagtaatacgggaccagacaag
tatcactgcgcctgtcctgagggttactctggccagaactgcgagagagcggataacgcc
tgtctgtcggagccgtgtctgaacgggggacgctgtatggagagcagccagggctttgag
tgccagtgtgctccggggtggaccggtccgacctgcgccatcaacaaagacgattgcagt
cctaacctgtgtaatcacggagggacttgtgtggacctcgtcaatggcttcaagtgcatc
tgtcctgcgcagtggatcggcaaaacctgtctcattgatgctgacgagtgtgctgagaac
ccgtgtgtgaacgcccacgtatgccgaaacctgattggaggatacttctgtgagtgcctc
cctggttggacaggaccaaattgtgacatcaatgttaacgactgccaagggcagtgtctg
aacggaggatcttgtaaggacctggtaaatgggtacaagtgtgtgtgtgcaccgggattc
acaggcgatcattgtgagaaagatatcgacgagtgtgccagtcagccctgtctgaacaag
ggccagtgccgcgatgacgtcaacggcttccagtgcctgtgcctgcctggtttctctgga
aacctttgccagttggatattgactactgcgagggaaatccgtgtcagaacggcgcgccg
tgttttaacctggcgacggattattactgtaaatgtcctgaggattacgagggcaagaac
tgctcccatctcaaagaccactgtcgcaccacaccctgcgaagtgattgacagctgtacg
gtcgctgtggtttcgaacagcaccccgggaaacgtgcgctacatctcgtccaacgtgtgc
ggcccacacggtcagtgccgtagcctagccggcggccatttcagctgcgagtgccaggag
ggtttcactggaacctactgtcatgagaacattaatgactgtgagagcagcccgtgccgt
aacggagggacgtgtatcgataaagtgaacgtttaccagtgtatctgcgctgacggctgg
gagggacccgactgcaaaactaatattgatgactgcagcacaaacccgtgccacgatcgc
ggcgtgtgtcgcgacctggttaacgacttctactgcgagtgcaaaaacggctggaagggc
aagacctgtcactcacgtgagagccagtgcgacgagacgacgtgtaacaatggcggtacg
tgctacgatgaaggagactccttcaaatgcatgtgtgcctctggctgggaggggacgagc
tgtaatatcgcgaaaaacagcagctgccttcccaacccgtgcgagaatggcgctacctgc
gttgtcagtggcgaccgcttcacctgcgtgtgcaaggaaggctgggagggactcacctgc
agccagaactcgaatgactgcaacccacacccatgctacaacagcgggacatgtgtggac
ggggataactggtaccggtgcgagtgtgccgcgggcttcgccggacccgactgtcgcatc
aacattaacgagtgtcagtcgtctccgtgtgcgttcggcgcgacgtgtgtggacgagatt
aacggctaccgctgcttgtgtccaaccgggagaaccggagcgaggtgtcaggaagtaaac
agacttccctgcatggacagcggccggatcgtagccgacggggcgagatgggacaaggac
tgtaacacctgctactgtcacaacagcagaatcacctgcacaaagttgttgtgtggtccg
aggccgtgtcgtctggtcggagccgggcgaggagattgtccagcgggtcagtcgtgtgtc
ccggtgcaagaggaccgctgcttcgtgcggccgtgccccacgcaaggcgagtgctggtca
ggtcaaacgacacccatccagtcccggtgccccccagagagcgactgtgccaacgtcact
ttcacgttcacgaaggatatcatgccacagggcgtgacggtggagcaggtgtgcagagag
ctgcgcagtctctacgtggtgaagaatctctcctccgagttctccatctccatcacatgt
gaaccttccaccacggccagcagtgaaatacacgtagccattcaggtttctgatgacagc
ggcagcagccacgctccagttaaagggatcacggacaggatcatcgacgtggtgagcaaa
cgcagcgctaacggtaccatcctcactgccatcgcggaggtacgcgtccagcacaggccc
cccggcagctccaacgattacctggtgccagtgctggtttccgtggcaacagtgatctgg
gcgttggcgctggcgtggacagcattgtggtgtgtacgacgacgtcgcaagcaaaacgcg
agcgccacggcaaccgggtacacctccgcgccgtcagccgcaccgactgccgaggacaac
aatgcggccaacaacgcacgcgagaatctgcaccagatcaaaaaccgcattgagaaaaat
gccgtcagcgccaagatcggacaacagaaactcccgcctcaggagacggcggtgcccgag
gacgacccggacaccgaaaaacgtctccacaaagcacggtttccgcggcgaccagtgtac
gctccagtggagtgcgacgagcggccaggcagcctgcacggaaaacgagctcactggact
aacaaacgtgacaacagagacttggagtcccagaacagcttgcacagaatggagtatatc
gtatag
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