Pangasianodon hypophthalmus (striped catfish): 113537469
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Entry
113537469 CDS
T05759
Symbol
tra2b
Name
(RefSeq) transformer-2 protein homolog beta isoform X1
KO
K12897
transformer-2 protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113537469 (tra2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phyp01009
]
113537469 (tra2b)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phyp03041
]
113537469 (tra2b)
Protein phosphatases and associated proteins [BR:
phyp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113537469 (tra2b)
Spliceosome [BR:
phyp03041
]
Common components
Common spliceosomal components
SR proteins
113537469 (tra2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
FMP27-BLTP2_C
RRM_occluded
NPR3
Motif
Other DBs
NCBI-GeneID:
113537469
NCBI-ProteinID:
XP_026787741
LinkDB
All DBs
Position
Unknown
AA seq
286 aa
AA seq
DB search
MGSSRSVSVVLIWFGFAQESRSRSVSPRGSVKSNSNSPGRSKDGSHRSRSRSKSRSRSRS
KSRSRSRSHRSSRRRHSRSRSRRRHSRSRSYSREYRRSRSHSPMSNRRRHVGNRANPAPN
CCLGVFGLSLYTTERDLREVFSKYGPLANVNIVYDQQSRRSRGFAFVYFENSEDSKEAKE
QANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGGGGGRPSTSSSRSRDYYDRGYDR
GYDRGYDRYDDREYYKSYRRRSPSPYYGRGGYRSRSRSRSYSPRRY
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgggaagttctcgctctgtttctgttgtgctcatttggtttggattcgcgcaggagtcc
cgttctcggagtgtgagtcccagaggctccgtgaagtcgaacagcaactcgccgggaaga
tctaaggatggttcccaccgctcccgctccagatccaaatctcgctccaggtccaggtca
aagtccaggtccaggtcccgttcccaccggagctctcgccgtcgtcactcccgctcacgc
tctcgaaggcgccactcgcgtagccgctcatacagccgcgagtaccgacgcagccgcagc
cactcgcccatgtccaatcgcagacggcacgttggcaaccgggcgaaccctgcccccaac
tgctgcctgggtgtgttcggcctgagcctgtacaccacagagcgagacctgagagaagtg
ttctccaaatacggccccctcgccaacgtcaacattgtctacgaccagcagtctcgccgc
tcacgaggcttcgccttcgtctacttcgagaacagtgaggactccaaggaggctaaagag
caagctaatggcatggagctggacggccggcgtatcagagtggacttttccatcaccaag
agaccacacacacccacacctgggatttacatgggacggcccacctatggaggcggtgga
ggaagacccagcacatcctccagtcgctccagagactattacgatcggggctatgaccgt
ggctatgatcgaggttacgaccgctatgacgatagggagtactacaaatcctacaggcgc
aggtctccttcaccatattacggtcgtggaggatacagatcccggtcccgctcgcggtcc
tactccccacggcgctactga
DBGET
integrated database retrieval system
