Pangasianodon hypophthalmus (striped catfish): 113537577
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Entry
113537577 CDS
T05759
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1-like isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113537577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113537577
Membrane trafficking [BR:
phyp04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
113537577
Small GTPases and associated proteins
Rab associated proteins
113537577
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
FYVE_2
PDZ
Motif
Other DBs
NCBI-GeneID:
113537577
NCBI-ProteinID:
XP_026787924
LinkDB
All DBs
Position
Unknown
AA seq
1449 aa
AA seq
DB search
MAASVGPQGGPRASVPASMPDIPDLSHLTEEERRIILAVMARQKEEEEKEQAMLKTLHQQ
FESYKEQVRRIGAENKRQQATHKDDAPTCGICRKTKFADGCGHLCSYCQTKFCARCGGRV
SLRSNNEDKVCLIGKDRVMWVCNLCRKQQEILTKSGEWFSSGPRGRPLSVAGPEADRDGK
LRSRSQATAGANPASANDAQPATDRPKGADIMPASRARSEPPREKKRPVSLHEQNGKVIV
RGERRVGPGRQLSQASEDRAPAERRESRRLEKGHSQEYDHSGDTAHPDQRRRKEEEERER
ERQRREEEYQNRYCSDPNLARYPVKPQKEEQEMRMHAKVSKMRQERHHSDMAINEVGLAQ
DGCETPGSRLSRRAAGNENRKALLENHRAYSVDRTVGGTAGGGPVPLQKQGHSGSHMSPG
GSQDLRDGQDWGLKGYLEPGSAALLHKTKREKAAESFRKDSSLSSDQSECLRPPPPRGYR
PKRGLNKRQMSISSSEEEGGSTPEYTSCEDVEIESISEKGDWDCHPLDPTVWHHPVTWQP
SKEGDHLIGRITLSKRSAVPREAGSLLGLKVVGGKITETGRLGAFITKVKKGSLADVVGH
LRAGDEVLQWNGKALPGATKKEVYNIILESQSAPQVEIVVSRPIGDIPRIPEKSHPPLES
TGSSSIDESHKVDRPSISVMSPTSPGMLRDLPQDLPGQLSVKLWYDKVGHQLIVNVLQAI
DLPSRPDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKSSEPRWNQTFLYSHVHRRDFRERM
LEITVWDQPRAQEEESEFLGEILIELETALLDDQPHWYKLQTHDVSSLPLPQPSPYLPRR
HVHTDSPSKKLQRSHRIIETDYDDAITVVSSAAERNSRERERCSTLTVPERQAAIQHRSR
SVSPHREDQCRGRSRHTHVPMQRSLDEIRQKRHHSQSPTHYYNPQQEHRSGDSDYDYSED
SEVLEMHRSIRGGSAECLHTNSDLQPSLDRVRSASTTCLRPESSFRSPDRERAHLHGGHN
SPTESPLSVRRGRQLPQLPAKSSSIEQALAVEERARQLSQMRVPSYRPGSSASSGHEQDM
DLKNKRDMYKRSCDNVSARSSDSDVSDVSAISRASSASRLSSASYMSVQSERPHGRISRQ
VRASAGRSMLKSTSVSGEINTPERTDGSQSDTALGTVGSSSSKKRRASLNARFVAIVGNR
RSRSTSQISQTEASTKKSKGGGTIQRSQETGMAVELQRNMSRQPSRESNNGSMASYNSEG
SPIFPAVRVETQFSDFLDGLGPAQLVGRQTLATPAIGDIQIGMVNKKGKLEVEVIRARGL
IQKPGSKSLPAPYVKVYLLENGAYVAKKKTKIARKTLDPLYQQTLQFEESPQGKVLQVIV
WGDYGRMDHKSFMGVAQILLEELDLASNVIGWYKLFPPSSLVDPTLASLTRRASQSSLDS
SSGPGGIRS
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggccgcttcggtagggccccagggtggcccgcgggcttccgttccggcttctatgcct
gacataccggacttgagccacctcacagaggaggagaggagaataatcctggcggtgatg
gcgcgccagaaggaggaagaggagaaagagcaagccatgttgaagacgcttcatcagcaa
ttcgagagttacaaggagcaggtaaggcggatcggggcagagaacaaacggcaacaagcc
acccacaaggacgatgccccgacctgcgggatctgccgcaagaccaagtttgctgacggc
tgcgggcacctctgctcctactgccagaccaagttttgtgcccgttgtggtggaagagtg
tctctacgctccaacaatgaggataaagtgtgtctcataggaaaggacagggtgatgtgg
gtatgcaacctgtgtaggaagcagcaggagatccttactaaatctggagaatggttctca
tcagggccgagaggcaggcctctgagcgtggccggccctgaggctgaccgggacgggaag
ctgcgttccaggtcacaggctacagccggagctaaccccgctagtgctaacgacgcccag
ccagccactgaccggcccaagggagcagacatcatgccagcctcacgagctcgcagtgaa
cctccacgagagaaaaagaggccagtgtctctacatgagcagaatggcaaggtcattgtc
agaggtgagaggagagtgggaccgggcaggcagctgagtcaggcttcagaagatcgtgct
ccagcagaaaggcgagagagcaggcgtctggagaaaggccattcacaagaatatgaccac
tctggtgacactgcccatcctgaccagaggcgtagaaaagaagaagaggaacgggagcgg
gaaaggcagcgaagggaagaggaataccaaaatcgctactgtagtgatcccaacctggcc
cgctaccctgtcaaacctcagaaagaagaacaagagatgcgcatgcatgccaaagtgtcc
aaaatgcgacaagaacgtcaccacagtgacatggccatcaatgaagtaggcctggctcaa
gatggttgtgagaccccaggcagccggctaagcaggagggcagcaggcaatgaaaaccgc
aaggcactactggaaaaccacagggcatactctgtggacaggaccgtggggggtactgct
ggtggggggcctgtacccctccaaaaacagggtcacagtggttctcatatgagccccggg
ggctcccaagacctcagggatggacaggattggggcctcaaaggctacttggagcctggt
tcagcagcattactgcacaagaccaagcgcgagaaggctgctgaaagcttccggaaagat
tcttctctcagttcagaccagtcggagtgtctccgaccacctcctccccgtggttacagg
cccaaacgaggcctcaacaagaggcagatgtccattagcagttcagaagaggagggaggg
tccacgcccgaatatactagctgtgaagatgttgagattgagagcatcagcgaaaaaggt
gactgggattgccatcctctagaccccactgtatggcatcatcctgttacgtggcagcca
tcaaaagagggagatcatttgatcggccgcatcactctgagcaagcgctcagccgtgcct
cgggaagctggctcactgctcgggctgaaggtggttggtgggaaaatcacagagactggg
agacttggagcgttcatcaccaaagtcaagaaaggaagtctcgcagatgttgtaggccat
ttacgagcaggtgatgaggtgttgcagtggaatgggaaggcgttgcctggagcaaccaag
aaagaagtatacaacatcattttggagtcgcagtctgcacctcaagtagaaatagtggtt
tcaaggccaattggagacataccaagaattccagagaagtcacatcctcctcttgaatct
actggttccagttctatagatgagtctcacaaggtggaccgtccctccatctccgtcatg
tcccctaccagtccgggaatgttgagagacctgcctcaggacctaccaggccagctttca
gtgaaactgtggtacgacaaagtgggccatcagcttatcgtcaacgtattacaagccata
gacctgccttctcgtccagacggcagaccacgcaacccttacgtcaaaatgtacttcctt
cctgatcggagtgacaagagcaagaggaggacgaagacggtgaagaagagctcagagcca
aggtggaaccagacgttcctttactcacacgttcaccgcagggacttcagagagcgcatg
ctggagatcaccgtgtgggaccagccgagagcgcaggaggaggagagcgagttccttgga
gagatcctgattgagcttgaaacagctctgttggacgatcagccacactggtacaagctg
cagacccatgacgtgtcctctctccctctaccacaaccctccccatacctcccccgcaga
cacgtccacaccgacagccctagcaagaagttacagagatctcatcgcatcattgagact
gattatgatgatgctattacggtagtgtcttcagcagcagagaggaactctagagagagg
gagaggtgcagcactctgacagttcccgagaggcaggcagccattcagcatcgctctcgc
tccgtctccccacacagagaggaccagtgtagaggacgttcacgccacacacatgtcccc
atgcagaggagtctggatgaaattcgccagaaacgtcatcattcccagtcacccactcac
tactacaatccacagcaggagcaccgatctggagactcagactatgactactcagaggac
agtgaggtcctggagatgcacagatcaatccggggcgggagcgctgagtgcctgcacaca
aacagtgatcttcagccctcgttggacagagtgcgaagtgccagtacgacctgtttgagg
cctgagagcagtttccgctcccctgacagagaaagagcacatctgcatggtggacacaac
tcccctacagagtctcccttatcagtgcgcagaggaagacagctcccacaactccctgct
aagagcagcagtatagagcaagctctggcagtagaagagcgagctcggcagttgagtcag
atgcgggttccatcatatcggccaggttcgtctgccagctcaggccatgaacaagacatg
gatctgaagaacaagagagatatgtacaagaggagctgtgataacgtgtcggcgaggtcg
tcggacagtgatgtaagcgacgtgtcagccatctcgcgagccagcagtgcctctcgtctc
agcagcgccagctacatgtctgtccaatcagagaggccacacggacggatcagtcggcag
gttcgggcctcggcgggtcgcagcatgttaaagagcacgagtgtgagtggcgaaatcaac
acgccagagcgtacggacggcagccagtcggacacggcgctcggcacagtgggcagcagc
agcagcaagaagcgtcgtgccagcctcaatgcccgcttcgtagccatcgtgggcaacagg
cgcagccgcagcacctcgcagatcagccagacagaggcgtccactaaaaagtcaaaggga
ggtgggacgatacagcggagccaggagacaggcatggccgtcgagctgcagcgcaacatg
agtcgacagcccagccgcgagtccaacaacggcagtatggccagctacaactccgaggga
agtccgatcttcccagccgtgagggtggagacgcagttcagtgacttcctggatggactg
ggtcctgctcagcttgtgggccgacaaactctggccactcctgctattggagacatccag
attggcatggtgaacaagaagggaaagctggaggtggaggtgatccgagcccgtggcctc
atccaaaaaccaggatccaaatctctcccggctccttatgtaaaggtgtacctgctggaa
aatggggcatatgtggccaagaagaaaacgaaaattgcacggaaaacgctggacccgctg
taccagcagaccctgcagtttgaagagagcccacaggggaaagtgttacaggtcattgtc
tggggagattacggacgaatggaccacaaatccttcatgggagtagcacaaatcctattg
gaggagctggacctggccagcaacgtgattggctggtacaaactgtttccgccctcctcc
ttagtagaccccacgctagcgtcgctgactaggcgtgcttcccagtcgtctctggacagt
tcttcaggacctggggggattcgatcctag
DBGET
integrated database retrieval system
