Pangasianodon hypophthalmus (striped catfish): 113537591
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Entry
113537591 CDS
T05759
Symbol
mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113537591 (mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113537591 (mid1)
Enzymes [BR:
phyp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113537591 (mid1)
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113537591 (mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
fn3
ANCHR-like_BBOX
zf-RING_UBOX
TRIM_CC
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4
PRY
FN3_DSCAM-DSCAML_C
zf-RING_2
Pur_ac_phosph_N
zf-C3HC4_3
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
113537591
NCBI-ProteinID:
XP_026787956
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MRLCVLSLSPLSRFGSPSLIIRRDVAAAWSREKSIDSCLALPDFANAIPSSLHLKRMETL
ESELTCPICLELFEDPLLLPCAHSLCFNCARRILVSHCTSGEPADAICAFQCPTCRYAIS
LSPQRGLDALKRNVTLQNIIDRVQRASTSATLLLSSSGHSSPGDSPLGAMTTATAPSSPT
ELVQCQFCEQEPPQCAVKTCVTCEVSYCEECLRATHPNKKPFTGHRLIEPLPDSHLRGLQ
CLEHEEEKVNMYCVTDEQLICSLCKLVGRHRDHQVAALNERYEKLKQTLDANLSNLIKRS
NELESLMGKLIQTCQHVEVNASRQEGKLMEECDILISIIQERRQIIGAKIKEGKTVRLRK
LAQQIANCKQCIERSSALITQADQTLKETDHARFLQTAKSISERVSMATASSQVLIPEIN
LTDTFDTFALDFTREKKMLESLDYLTAPSPPGIREELCTASYDTITVHWTSDDEFSVVSY
ELQYTIFTGQSNIVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFIVKAINQAGSRSS
EPGTLKTNSQPFKLDPKSAHRKLKVSHDNLTVERDEISSKKSHGQERFSSQSSYGVIGNV
YIDSGRHYWEALIGGSTWYAVGIAYKSAPKHEWIGKNPLSWVLCRCNNSWVVRHNSKEMA
IDPSPHLRRVGVLLDYDAGSLAFYDAVSSQHLHTFHITFTQPVCPVFNVWNKCLTVLTGL
PIPDHLEGVEAFD
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaggctctgcgtgttgagcctctcgccactttctcgatttgggtcaccgagcttgatc
atcaggagagatgtcgctgctgcctggtctcgggagaaatccattgacagctgcctggct
ctcccggattttgctaatgccattccctcttcgctccacctaaaaaggatggaaaccctg
gagtcggagctgacgtgcccgatctgcctggagctatttgaggaccccctgctgctgccc
tgtgcccacagtctgtgcttcaattgtgctcgccgcatcctggtctcgcattgcacctca
ggtgagccagccgacgccatctgcgccttccagtgccctacgtgccgctatgccatttca
ctgagcccacagcgtggcctggatgcactcaagcgcaacgtcaccctccagaacatcatt
gaccgtgtccaaagggcttcgacttctgccactcttcttctgtcctccagcgggcacagt
tcaccaggcgacagccctctaggtgccatgacgactgccactgcaccctcctcacccact
gagctggtgcaatgccagttttgtgagcaggaaccgccacagtgtgctgtgaagacctgc
gtaacatgtgaggtgtcttactgcgaggagtgcctgcgtgccacccaccccaacaagaaa
cccttcactggacatcgcctcattgaacctttgcctgactcacacctcagaggcctgcag
tgccttgaacatgaggaggagaaagtgaacatgtactgtgtcacggatgagcagctcatc
tgctccctctgcaagctggtgggacggcaccgtgaccaccaggtggcagcgctaaatgag
cgctacgagaagctaaagcaaacattggacgctaacctcagcaatttgatcaagaggagc
aatgagttggaatcactaatggggaagctgattcagacctgtcagcatgtggaggtgaat
gcatcacgacaggaaggaaagctgatggaagaatgcgacatcttgatcagcataattcag
gagaggagacagattattggtgccaaaatcaaagagggcaagacggttcgactgcgtaaa
ctagcacaacaaattgccaactgcaagcagtgcatagagcgctcatctgctctcataact
caagcagaccagacgctgaaagaaaccgaccatgctcgcttcctccagactgccaagagc
atctcagagcgagtctccatggctacggcatcctctcaggtcctgatacctgagattaat
ctgacagacacatttgacaccttcgcattggattttaccagagagaagaagatgctagaa
agtcttgattacctcacagcacccagtcctccaggtatccgagaggagctgtgtacggca
tcctatgacaccataactgtgcactggacatctgatgatgagttctctgtagtttcttat
gagcttcagtacaccatctttactggccagtcaaacattgtcagtctctgcaactctgct
gacagctggatgattgtgcccaacatcaagcagaaccactacaccgttcacggtctgcag
agtggcaccaagtacatcttcattgtcaaggccattaatcaggcaggaagtcgcagcagt
gagcctggaacactcaaaaccaacagtcagccatttaagcttgacccaaagtctgcacac
agaaagctaaaagtatcccatgacaacctgacagtggagcgtgatgagatatcctcaaag
aagagccacggacaggagcgcttcagcagccaaagcagctacggcgttataggaaacgtg
tacatcgacagtggccgccattattgggaggctctaattggagggagcacctggtatgct
gtgggcatagcctataagtcagcacccaagcatgagtggattgggaagaaccctttgtct
tgggtgctgtgccgttgcaacaattcctgggtggtgcgccacaacagcaaagagatggcc
attgacccctcaccacacctgagacgagtcggcgtgctcctggactacgatgcaggctct
ctggctttctatgatgccgtgagctctcagcacctccacaccttccatatcaccttcacc
cagcctgtttgtcctgtatttaatgtctggaacaaatgtcttacagtcctaacaggcctt
cctatcccagaccatctggagggtgtagaggctttcgactga
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integrated database retrieval system
