Pangasianodon hypophthalmus (striped catfish): 113537592
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Entry
113537592 CDS
T05759
Name
(RefSeq) ATP-binding cassette sub-family E member 1-like
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phyp03009
]
113537592
Ribosome biogenesis [BR:
phyp03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
113537592
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
AAA_21
SMC_N
Fer4
AAA_22
AAA
AAA_15
AAA_16
Fer4_6
RsgA_GTPase
AAA_29
VapE-like_dom
AAA_23
NACHT
Fer4_10
SRP54
Fer4_21
Fer4_2
AAA_30
TsaE
AAA_5
Fer4_4
Fer4_7
Fer4_16
Fer4_9
Motif
Other DBs
NCBI-GeneID:
113537592
NCBI-ProteinID:
XP_026787962
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MSEKPIRIAIVNHDKCKPKKCKQECKKSCPVVRMGKLCIEVTTQSKIVWISESLCIGCAI
CIKKCPFGALAIVNLPSNLEKETTHRYCANSFKLHRLPIPRPGEVLGLVGTNGIGKSTAL
KILAGKQKPNLGKFDTPPDWQEILAYFRGSELQNYFTKILEDDLKAIVKPQYVDQIPKTV
KGSIGSILSRKDDTKTETVVCEQLDLTHLRDRNVEDLSGGELQRFACAVVCIQRADIFMF
DEPSSYLDVKQRLKAAITIRSLITPDRYVIVVEHDLSVLDYLSDFICCLYGVPSAYGVVT
MPFSVREGINIFLDGYVPTENLRFRDTSLVFKVAETATEEEVKKMCRYQYPNMKKAMGDF
ELRIIEGEFTDSEIMVMLGENGTGKTTFIRLLAGRLKPDDGGEVPILNVSYKPQKISPKF
KGSVRALLHEKIRDAYTHPQFVTDVMKPMQIDSIIDQDVQNLSGGELQRVALALCLGKPA
DVYLIDEPSAYLDSEQRLMAARVIKRFILHAKKTAFVVEHDFIMATYLADRVIVFDGVPS
QRTTANTPQMLLAGMNKFLSLLEITFRRDPNNFRPRINKLNSIKDVEQKRSGNYFFLDD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaaaccgatccgaattgccatagtgaaccatgataaatgcaagccaaagaaa
tgcaagcaggagtgcaagaagagctgcccggtggtccgaatgggcaaactgtgtatagag
gtcaccacacaaagcaaaatcgtatggatatctgaatcgctctgtataggatgcgctatc
tgcatcaagaaatgtccatttggtgctttggctatcgtcaacctgccgagtaacctggag
aaagagaccacacaccgatactgtgccaactcttttaaactacacaggttaccaatcccc
agaccaggagaggttttagggctggtcggtactaacggcattggaaaatcaacagcactg
aagatcctcgctggaaaacagaagcccaacctggggaaatttgatactccccctgactgg
caggaaatcctggcttacttccgaggatctgaactgcagaactacttcacaaagatcctg
gaagacgatctgaaagccattgtgaagcctcagtacgtcgaccagatccccaaaactgtc
aagggaagcataggctctattctgagcaggaaggatgacactaagacagagactgtagtc
tgtgagcaactcgatctgactcatctcagggacaggaatgttgaggatctgtcaggagga
gagctgcagcgtttcgcctgtgcagtggtgtgcatccagagagcagacattttcatgttt
gatgagccctccagttacttggatgtgaagcagcgtttgaaagctgccatcaccattcgc
tctcttatcacaccagacagatacgtaattgttgtagagcatgatctgagtgttctggac
tacctgtcggacttcatctgctgtctgtatggagtacccagtgcctacggtgtcgttacc
atgcccttcagtgtacgagaaggcatcaacattttcctggacggatacgtgccgactgag
aacctccggttccgtgacacttcactggttttcaaagtagctgagacggccactgaagag
gaggtgaagaagatgtgtcgataccagtaccccaatatgaagaaggccatgggtgacttc
gagctgaggatcattgagggcgagttcactgactctgagatcatggtcatgcttggagaa
aacggaactggcaaaactacattcattaggctgctcgctggccgattaaaaccagatgat
ggaggagaagtcccgatcctcaacgtcagctacaaacctcaaaagatcagccccaaattc
aaaggtagcgtgcgtgccctgctgcacgagaagatcagggatgcgtacacacacccgcag
ttcgtcacagacgtcatgaagcctatgcagattgacagcatcatcgatcaggatgttcag
aacctgtccggaggagagctgcagagagtagcgctcgctctgtgtctgggtaaacctgca
gacgtctacctgatagacgagccctcggcatacctggactcagaacagcggctgatggct
gccagagttatcaaacgattcatcctgcatgcaaagaagacagcttttgtagtcgagcat
gacttcatcatggccacgtacctggctgaccgtgttattgtgttcgatggagttccgtca
cagagaacgactgccaacacgccacagatgctgcttgctggcatgaacaagttcctttca
ctgctggagattacgttcaggagagaccccaacaacttcagaccaagaatcaacaagctc
aattccattaaggatgttgaacagaagagaagtggcaactatttcttcctcgatgattag
DBGET
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