Pangasianodon hypophthalmus (striped catfish): 113537604
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Entry
113537604 CDS
T05759
Symbol
brat1
Name
(RefSeq) BRCA1-associated ATM activator 1 isoform X1
KO
K23112
BRCA1-associated ATM activator 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyp03400
]
113537604 (brat1)
DNA repair and recombination proteins [BR:
phyp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
113537604 (brat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
Fer4_20
Motif
Other DBs
NCBI-GeneID:
113537604
NCBI-ProteinID:
XP_026787980
LinkDB
All DBs
Position
Unknown
AA seq
829 aa
AA seq
DB search
MDSDCLTLLPSVCEVLADSTLLLHDDTSLEKLLDCFKELITQKDEQYLMQYLPYLLQFLQ
SITKSQTVDPSVFSFSLKLVGLLAAKEYSFTLLEEKGVLEYMFQPESWHMLELWKNSSVR
YGWLQGLWNMLQHPQSMNFFCKNGFIKLLLHLQNDKGLFITSLTSQILAHILNSFMPVVL
SNSTKSETPNCCPVSTEFVSVTKEIMSHVAASLASQEQAVIISALRLLATILTECGEPLK
RMIWEHVVGPLEVLANAKDDSFTLHIIAVLQAVARSPVLIQPDCRVETLMDIMLFSRSAT
ESVQCAAIILQMEDCPEVLKWKATDVIMLPLLCASASPLQLHEPDKLNGYISHLEKQLSL
KAFCVCLLTQSLSGIAEHVCKKSLTDIPVQLIASSVIKLLKICIGHRPFTLLEAGTFPHL
IGCYKVQQCSIDLLGDLTVYAESMDLIQEAFTVLLQYLQYPGTHATVLKKTHQATLKWLS
ICSPSSDLWRTVIHELFQLMKKHVCDGRWEVRDSTLEFITQLTANLKGNSKYTETLHSSG
MISVLFTSLSDLEGYVQASAVAALGEAITTSDVCSNVQEKAVTHLLSILSQDTQSFPHRA
AVKVFTAWLKSPHCCTALEQSLSSVLLLAGNDFDWEVKVHTLELADVLMDKSLDHCPCHF
QKIYRSSESTCLMQALTKLKDLGVFEFLFKCLFDCDRTVCQKACSLLLKLRTFMKEIATV
DHKVLRLEICKYSWNEEILHRYHKNREAIELNCVKNGDKVSCRQMDSEDSLDVSPKEMDL
CQILELLDLEKMQHTLSLSSDHVINSPKSLMEDILFMTRESEKNIADCY
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgactgcttaaccctactgccatctgtttgtgaagttctggctgattccaca
cttttgctacatgatgacacatctttggaaaagcttcttgattgttttaaagaactgata
acgcagaaagacgagcagtatcttatgcagtatctaccatatctcctgcagttcttgcag
agcataacaaaatctcaaacagtagatccctctgttttttcattctcactcaaacttgtt
gggctgctggcagctaaagagtacagtttcaccttgctggaggagaaaggagtgttggag
tatatgtttcagccagagagctggcatatgctggaactctggaaaaattcctcagtacgt
tatgggtggctacagggattgtggaatatgttgcagcatccacagtccatgaactttttc
tgcaagaatggattcattaagttgctcctccatctgcaaaatgacaaaggccttttcatt
acttctttgactagtcagattttagcacacattttaaactccttcatgccagtagtgctg
agcaacagtactaagagtgagaccccaaactgctgtcctgtcagcactgagtttgtttca
gttacaaaagaaataatgagccatgtagctgcctcattagcctcacaggagcaggctgtt
atcatctcagccttaaggttgttggccacaattctcaccgagtgtggagaaccactcaag
agaatgatttgggaacatgttgtgggaccactggaagtattagcaaatgcaaaagatgac
tcatttacactgcacatcatagcagtccttcaagctgttgcaaggagtcctgttttgatc
caaccagattgtagagtggagacactgatggacatcatgttgttttcaagaagtgcaact
gaatctgtgcagtgtgcagcaattatcttgcaaatggaagactgccctgaagttttaaaa
tggaaagccacagatgtaatcatgcttcctctactgtgtgccagtgcatccccactacag
cttcatgaaccagataagctaaatggctacatatcacacttggagaagcagctatccctg
aaagccttctgtgtgtgtctgctcactcagagcctgtccggcatagcagagcatgtatgt
aagaaatctttaaccgatattcctgttcaactgattgcctcttctgtgataaaacttctg
aaaatatgcattggccatcgccccttcactctactggaagctggtacatttcctcacctt
attggctgttacaaggttcagcagtgcagtattgacctactaggtgacctcactgtttat
gcagagagcatggacttaattcaggaggcttttactgttcttctgcagtatctgcagtat
cctggcacacatgctacagttttgaagaaaacacatcaggccactcttaaatggctcagt
atctgttcaccatcatcagatttatggaggacagttatacatgagctctttcaattaatg
aagaaacatgtatgtgatggacgatgggaagtgagagattcaactctggagtttattaca
cagctcacagccaacctcaaaggtaatagtaaatatactgaaactcttcatagtagtggc
atgatctcagtgctcttcacctcattgtcagatttagaaggctatgtccaagcaagtgca
gtggcggctcttggagaggcaataactacatctgatgtctgtagcaatgtgcaggaaaaa
gctgtgacacatctgttgagcatactctctcaagatacacagagcttcccacatcgtgct
gcagtgaaggtcttcactgcatggctaaaaagcccacattgttgtactgccttggagcaa
tctcttagctcagtgttgttacttgctggaaatgactttgactgggaggttaaagttcac
accctggagttagcagatgtattgatggacaaatcactagatcattgtccctgtcacttt
cagaagatctatagaagctctgaaagtacatgcttaatgcaggcattaaccaaactgaag
gatttaggggtatttgagtttctgtttaaatgcttatttgactgtgacagaactgtttgt
cagaaagcttgttcactcctgcttaagctaagaacatttatgaaagagattgctactgtt
gaccacaaagtccttagacttgaaatatgtaagtacagttggaatgaggaaatacttcat
agataccacaaaaaccgagaggccattgagcttaactgtgtgaaaaatggagacaaagta
tcttgtaggcaaatggacagtgaagattctcttgatgtatctccaaaagagatggatctg
tgccagatattagaattattagaccttgagaagatgcaacatactttatcactaagtagt
gatcatgtgataaattcaccaaaatcactaatggaagacattttatttatgacaagagaa
agtgaaaagaatattgcagattgctattga
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