Pangasianodon hypophthalmus (striped catfish): 113537627
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Entry
113537627 CDS
T05759
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113537627 (u2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phyp03041
]
113537627 (u2af1)
Spliceosome [BR:
phyp03041
]
Complex A
U2 snRNP components
U2 related factors
113537627 (u2af1)
Complex B
113537627 (u2af1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
113537627
NCBI-ProteinID:
XP_026788023
LinkDB
All DBs
Position
Unknown
AA seq
228 aa
AA seq
DB search
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ
TADASRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVMDLNNRWFNSQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKRHRSRSRSRDRRSRSRDRGRRDRERRRSRDRERSGRF
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtacctagcgtccatttttggtacagagaaagacaaggtcaactgctccttc
tactttaagattggagcatgtcgacatggagatcgctgctccagactccataataaacca
actttcagccagactattttgatccagaacatctaccgtaaccctcagaacagtgctcag
acagctgacgcctctcgctgtgccgtgagcgacgtggaaatgcaggagcattatgatgag
tttttcgaggaagtcttcacagaaatggaggagaagtacggtgaggtggaggagatgaat
gtgtgtgataatctgggcgatcaccttgtcggcaacgtttatgtgaagttccggcgtgag
gaggatgccgagaaagctgtgatggacctgaataaccgctggttcaacagccagcccatc
catgccgaactctctccggttactgacttcagagaagcctgctgcaggcagtatgaaatg
ggggagtgcactcgaggtggcttctgtaacttcatgcacctaaagccgatctctcgcgag
ctgaggagggaactgtacggacgccgtaggaaaaggcaccgctctcgttctcggtctcgt
gaccgtcgctctcgctcgcgggaccgcggccgtcgcgaccgggagaggaggagatcaagg
gatcgtgaacgctctggaaggttttga
DBGET
integrated database retrieval system
