Pangasianodon hypophthalmus (striped catfish): 113537629
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Entry
113537629 CDS
T05759
Symbol
lamp1
Name
(RefSeq) lysosome-associated membrane glycoprotein 1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03272
Virion - Hepatitis viruses
phyp03273
Virion - Lassa virus and SFTS virus
phyp04140
Autophagy - animal
phyp04142
Lysosome
phyp04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
113537629 (lamp1)
03272 Virion - Hepatitis viruses
113537629 (lamp1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113537629 (lamp1)
04142 Lysosome
113537629 (lamp1)
04140 Autophagy - animal
113537629 (lamp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113537629 (lamp1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phyp04147
]
113537629 (lamp1)
04090 CD molecules [BR:
phyp04090
]
113537629 (lamp1)
Membrane trafficking [BR:
phyp04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
113537629 (lamp1)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
113537629 (lamp1)
Other autophagy associated proteins
RNautophagy/DNautophagy
113537629 (lamp1)
Exosome [BR:
phyp04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
113537629 (lamp1)
CD molecules [BR:
phyp04090
]
Proteins
113537629 (lamp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
VAS1_LD
Motif
Other DBs
NCBI-GeneID:
113537629
NCBI-ProteinID:
XP_026788028
LinkDB
All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
MTHRLLAGIATGCFFVLGWLTAAHAVILEVKNGNSTCIKADISANFTITYPITNGTKTVV
VPLPGSAVVGNGSSCEGDSPDLLATFGDGHSLGLVFSNDGHRYHVANLSLTYNLSDSATF
PQSTSKDITVLTTNTSPISAQLNTTYRCLSPSSVNLGGPGVTITFFNLHMQAYMHSANLS
TNETVCSADTPTTTAAPTTTPITTATPITPTKPERGNYSVENSTGTACLLARMGLQLNVT
YFSKSQNKTIVVITNVQPNKTHISGSCESTSATLLLTGELANLSFAFTLNSTTNKYHLST
LNMSASWEDMSELFSVSNSSLQYMQGTLGRSYMCSVEEVLPVVSTFSLNTFDLQVQPFGV
HNNEFGPADECRMQKDSMLVPIIVGASLAGLVLIVLIAYLVGRKRSHAGYQTI
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagactactggcaggcatcgccactggctgcttctttgtcttaggctggctg
actgcagcgcatgccgtaatacttgaagtgaagaatggaaattcgacctgtatcaaagca
gacatctcagccaacttcaccatcacataccccatcaccaatggaacaaaaactgtagtt
gtgccgctcccgggatcagcagtagtgggaaatggcagttcctgtgaaggagactctccg
gacctgctggccaccttcggtgatggtcactctctgggcctggtgttctccaacgatggc
catagatatcacgtggccaaccttagtctgacctacaacctgagtgacagtgccaccttt
cctcagtccaccagcaaggatattacggtgttgactacaaacacctctccgatctcagca
cagctcaataccacctacaggtgtttgagccccagctcagtcaatctgggaggccctgga
gtgacgatcacattcttcaacctccacatgcaggcctacatgcacagcgccaacctgagt
actaacgagactgtttgttcagctgatactcctaccaccactgctgcacccactaccacc
cctatcaccacagccacccccatcaccccaaccaaacctgagcgcggcaactacagcgtt
gaaaactccaccggcacggcctgtcttctggccagaatggggctgcagctgaatgtaaca
tacttctccaaatctcagaataaaactattgtggtgataacgaacgtgcagcccaataag
acgcatatctctgggtcatgtgaatccacaagtgctactctgctgctgactggagagctc
gccaacctcagcttcgcattcacattgaactccaccaccaataaatatcatctcagcacc
ttgaatatgtctgccagttgggaagatatgtcagagctattcagcgtcagcaacagcagt
ctacagtacatgcagggaaccctgggccgctcctacatgtgcagtgttgaggaggttctt
cctgtggtcagcactttctctctaaacaccttcgacctgcaggtgcagcccttcggcgtc
cacaacaacgagtttggaccagccgacgaatgtcgaatgcagaaggacagcatgctggtg
cccatcattgtcggtgcctccctagccggcctcgtcctcatagtcctcatcgcttacttg
gtcggcaggaagaggagtcacgcaggctaccagaccatctaa
DBGET
integrated database retrieval system
