Pangasianodon hypophthalmus (striped catfish): 113537650
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Entry
113537650 CDS
T05759
Name
(RefSeq) paraspeckle component 1-like isoform X1
KO
K24993
paraspeckle component 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phyp03041
]
113537650
Spliceosome [BR:
phyp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113537650
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
113537650
NCBI-ProteinID:
XP_026788055
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MANRNLKHVNIQNSSPSPKPQNPNRNPDSPSTERVQKMEGATPSPKVTSPQPEAEGSSEP
REMTLDLKSFRKPGEKTFTQRCRLFVGNLPTDITEEDFRKLFAKYGEANEVFINRDRGFG
FIRLETRTLAEIAKAELDGTVLRNRPIRIRFATHGAALTVRNLSPVVTNELLEQAFSQFG
PVERAVVVVDDRGRPTGKGVVEFANKPAARKALDRCADGALLLTTSPRPVIVEPTEQFDD
EDGLSEKLLQKSAQYHKEREQPPRFAQPGTFEFEYSSRWKALDEMEKQQREQVNRNIQEA
KEKLEAEMETARHEHQLMMMRQDLMRRQEELRRLEELRNQELQKRKQMEMRHEEERRRRE
EEMMRHRDQDEMRRQPDGFKPGFMDSREQDMRMSEMGARGAVNMGDSFNPAAAVSGNQGP
AQMMGMGMSGRGGAMGPEGSSNMGAPLIQDNGNMRNERFSQGAPAQMGSSMGIRPGVDSP
QQQQSPVIGGAGPVPPMGGPGGFGRGNPVGGNFDGPNNKRRRY
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccgaaaccttaagcatgtaaacattcagaacagttctccatctccgaagcct
caaaatccgaatcgcaacccggactctccgtccacggagcgcgtgcagaagatggaggga
gcgacgccatcgcctaaagtcacaagccctcagccagaagcagaaggcagcagcgagcct
cgggaaatgactctggacctgaagagtttcaggaaaccgggagagaaaacatttacacag
aggtgcagactgtttgtcggcaatcttcctactgacattacggaggaagacttcagaaag
ctgttcgccaaatatggcgaggctaatgaagtattcatcaacagagaccgaggattcgga
ttcattcgactggaaacaaggacattagcagagattgccaaagcagagttggatggaaca
gtgttgcggaacaggccaattcgcatccggtttgccacacatggagctgctctcacggtt
cgaaacctttcaccagttgttaccaatgagctcctggagcaggcattttcacagtttggg
cccgtggagagggcagttgtggtggtagatgatcgtggcagacccacaggtaaaggcgtt
gtggagtttgccaataagcctgctgcacgaaaggctcttgaccgttgtgctgatggagcc
cttttacttactacgtctccgcggccagttattgttgaaccaacagagcagtttgatgat
gaagatggtctttcagaaaaattactgcaaaagtcagcacagtatcacaaggaaagggag
cagcctccacgctttgcccagccaggcacctttgagtttgagtactcgtcacgttggaag
gcgcttgatgagatggagaaacagcagcgggagcaggtgaacaggaatatccaagaggcc
aaggagaaactggaggctgagatggagacagcaaggcacgagcaccagctcatgatgatg
agacaagatctcatgcgacgtcaagaagagttgcgccgactggaggaactgagaaaccag
gaactccaaaagcgcaaacagatggagatgagacatgaggaagagaggcggagacgtgag
gaggaaatgatgcgccacagagaccaggacgaaatgagacgtcagcctgatggttttaaa
cctggctttatggatagcagagaacaggatatgagaatgagtgaaatgggtgcccgtgga
gccgttaatatgggagattcttttaatcctgccgctgctgttagcggtaaccagggccct
gctcaaatgatgggcatgggcatgtcaggccggggtggagccatggggccagagggatca
tcaaatatgggggcacctctcattcaagataacggaaatatgcgtaatgaaagattttct
cagggagcacctgctcagatgggttcttcaatgggtattcgaccaggtgttgattccccc
cagcaacaacagtcacctgtgattggtggtgcaggacctgtgcctcctatgggtggtcca
ggtggatttgggcgaggaaatcctgttgggggaaactttgatgggcccaacaacaagcgc
cgtagatactag
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