Pangasianodon hypophthalmus (striped catfish): 113537668
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Entry
113537668 CDS
T05759
Symbol
nup133
Name
(RefSeq) nuclear pore complex protein Nup133
KO
K14300
nuclear pore complex protein Nup133
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113537668 (nup133)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113537668 (nup133)
03036 Chromosome and associated proteins [BR:
phyp03036
]
113537668 (nup133)
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113537668 (nup133)
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
113537668 (nup133)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
TetR_C_18
Motif
Other DBs
NCBI-GeneID:
113537668
NCBI-ProteinID:
XP_026788091
LinkDB
All DBs
Position
Unknown
AA seq
1139 aa
AA seq
DB search
MFTPRGASGSGRRHTARTGGRKSVNTPSGLLFSPRRAPLTPSRATPTRVQSCATVDSDHF
DVQTFGSSLPVKVMEALTMAEVDDQISVKVEESGWAWMVCGERLIIWKICQTAVAKLSVC
KDLQLSPSEYAYSADLISISSSSPLESASVQSVCVLAVSPDGLARFWPSLAHEGTYTETH
ADLGGHLCNYVTAVRGGSFIVSSYRGQLLRVGMEASGRLYQRAVQQGHGMLSGIGRRVSS
LFGLRSPPADTAVHSVLWVPDSGCLYTLSTCGLNKWEVGDTTEVQVLSWNACPSLSDSIA
DAIWGSESNYAELKAGVNVAYLDMQLSHAGLVVLAAAWHPADTPCLAYFCLVTLPDTTLP
VSDELSVEVTKYNPPFQSEEELHKTRLLLPRVKSPAAYLYNEELVYTCTTGAGRSGLPEE
KLTFNASGDRIRGGGVCADLPVFFSQINGLVAVVPRESASILPETMEDSLCTSLAGPGPE
GTPLETPPKMDTVAQEDKTKLLKQAFLEFCRNRVMEAQKMTDELFPDDGEGGAGGELDAL
VTQIDLDLVDDYPASDPRWAESVPDENAGFTLTSLILLHQLEDKMKAHHCFMDFLLQTGV
LDRLTSTTVRSSPMATRMLLCEHAEKLSAAVALKNHHSKQPELVNAAVVATLRKTGANVP
SSLTPADVFFREVSQISSIFESLLDEEEKCLKENPVTSVKWAEVVLNVNNIIKDMLQAAA
QYRETKASLYRAAENAAPEPEYIPWTASGGVGGVRTVIARQHDVILRSVYPHADSGLRNA
LSEQLVALLDSLLGGYVAQLTSLRRPGQQERYDTLEMEYTQRRAELLTPLLELGQYQWVA
ALAEKYCDFDILVQMCEQTDNQTRLQHYMTKFADQNFADFLFRWYMEKGKRGKLLSQPIA
QHQQLASFLQAHEHLSWLHHIHVQDFQSAHHTLYSQANTETRYFSKKKTLLALSKLTALA
SDMPEPLQRKQVNDIVEQERFLLHQETLPKQLLEDKQQNPDTMPLLSAHNLINLYICDEN
RGADEYDFKKALDLLEYIDKEDAVDITALKCAILSKALKKDWKENWSASDGSDDPLEAAR
DSIFVKILQKLIQEGVPLQEYLPDVKELLQVDELEALKSKPFFEFLLRANYEHFVQSQI
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgtttactccccgcggagcctcaggctcgggacgccggcacacggcgaggaccggcggc
aggaagagtgtcaacacgccgtcagggctgctgttctccccgcgcagagctcccctcact
cccagccgagcgactcccacgcgggtgcagagctgtgccacggtggactcggaccatttc
gacgtgcagacgttcgggtcgtctctacctgtcaaagtgatggaggctctgaccatggcg
gaagtggatgaccagatctcggtgaaggtggaggaatcaggctgggcgtggatggtgtgt
ggggagaggctgatcatttggaagatctgtcagactgcagtagcgaagctgtctgtgtgt
aaggacctgcagttatcccccagtgagtacgcctacagcgctgatctcatctccatcagc
tcatcatctccgctggagtcagcgtcggtgcagtcggtgtgtgtgttggccgtgtctccg
gatggtttggcccggttctggcccagtctggcccacgaggggacgtacacggagacgcac
gctgatctgggaggacacctgtgtaactacgtgaccgcagtcaggggaggcagcttcatc
gtgtcctcgtaccgcgggcagctgctgcgggtgggcatggaggcttctggaaggctctat
cagcgggcagtgcagcagggacacgggatgctgtcggggatcggacgccgcgtctccagt
ctgttcggcctccgcagccctccagccgacacagccgtgcacagtgtgttgtgggtgccg
gattcgggatgcctctacacactcagtacgtgtgggttgaataagtgggaggtcggggac
accacggaggttcaggtcctgagctggaacgcttgcccgagcctctccgacagcatcgcc
gacgccatctggggttcggagagtaactacgctgagctgaaggcgggagtaaacgtggcg
tatctggacatgcagctcagtcacgctggcttggtggtgttggctgcagcatggcatcct
gctgatactccgtgtttggcgtatttctgcttggtcacgctcccagacaccacgctaccc
gtgtcagacgaactctctgtagaggtcactaagtacaacccgccgtttcagagcgaggag
gagctccataagacgaggttgttgttgccgcgggtgaaaagtcctgcagcgtatctctac
aacgaggagctggtgtacacgtgcaccaccggcgccgggcgcagcgggctgccagaagag
aagctgacctttaacgcctccggtgaccgtatccgtggtggaggcgtgtgtgccgacttg
ccagttttcttctcccagattaacggcctggttgccgtggtacccagagagagcgcctcc
atcttgccagagaccatggaggattctctgtgtacttcactggctgggcctggccctgag
gggactccactggagacaccacctaaaatggacacggtagcacaagaggacaaaacaaag
ctgctgaaacaagccttcctggagttctgccgcaatcgtgtaatggaggctcagaagatg
acggacgagctcttccctgacgacggagagggcggcgcaggaggggagctggacgcgctg
gtgactcagatcgacctggacctggtggatgattatcctgcgtcggatcctcgctgggcc
gagtccgtgcctgatgagaacgccggcttcactctgacctcgctgattctgctgcaccag
ctggaggacaaaatgaaagctcaccactgcttcatggacttcctgctgcagaccggggtc
ctggaccggctcacctcgacgacagtgcgctcgtctcccatggcgactcggatgttgcta
tgcgaacacgcggagaagctgtcggcggccgtcgcgctgaagaaccaccacagcaagcag
ccggagctggtgaacgccgccgtcgtcgccacgctgaggaaaaccggtgcgaacgtgccc
tccagcctcacgcctgctgacgtcttcttcagagaggtgtctcagatctcctcgatcttc
gagtcactgctggatgaggaggagaagtgtctgaaggagaaccccgtgacctcagtgaag
tgggccgaagtagtcctcaacgtcaacaacatcatcaaggacatgctccaagcagcagcg
cagtacagagagactaaagcgtccctctacagagcagcagaaaacgccgctcccgagccg
gagtacatcccatggacagcctcgggcggagtgggcggagttcgtacagtcatcgcccgg
cagcatgacgtgatcctgcgcagtgtgtatcctcacgctgactcgggactccgtaacgct
cttagcgagcagctggtggcgctgctggactcgctgctcggcggttacgtggctcagctc
acctcgctgcgtcgccccgggcaacaggagcgctacgacaccctggagatggagtacaca
cagcgccgcgccgaactgctcactccgctcctggagctgggtcagtatcagtgggtggcg
gctctggccgaaaagtactgcgattttgacatcctggtgcagatgtgcgagcagacggac
aatcagactcgcctgcagcactacatgactaaattcgctgaccagaactttgcggacttc
ctgttccgctggtacatggagaaggggaagcgagggaagctgctgtctcagcccatcgct
cagcatcagcagctcgccagcttcctgcaggcccacgaacacctgagctggctgcaccac
atccacgtgcaggacttccagagtgcccaccacactctgtacagccaggccaacacagag
acacgctacttcagcaagaagaaaactctgctagcgctgagcaaactcacggctctggcc
tcagacatgcccgagccgctgcagcgcaagcaggtcaacgatattgtggagcaggagcgc
ttcctccttcatcaggagactcttcccaaacagctgctggaggacaagcagcagaaccca
gacaccatgcctctactgagtgcccataaccttattaatctgtatatatgtgatgaaaac
cgcggcgctgatgagtatgacttcaagaaagccctcgacttgctggaatacatcgacaag
gaagacgctgtggatattacagctctgaagtgtgcgattctcagcaaagccttgaagaaa
gactggaaagagaattggtcagcctcagacggcagtgatgatcctctggaggcagctaga
gacagcatctttgttaaaattctccagaaactcattcaggaaggcgttcctctgcaggag
tatctgcccgatgtgaaggagctgctgcaggtagacgagttggaggctctcaaatctaaa
cccttctttgagttcttactgagagccaactacgagcacttcgtccagtcgcagatctga
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integrated database retrieval system
