Pangasianodon hypophthalmus (striped catfish): 113537696
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Entry
113537696 CDS
T05759
Symbol
vps54
Name
(RefSeq) vacuolar protein sorting-associated protein 54
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phyp01009
]
113537696 (vps54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113537696 (vps54)
Protein phosphatases and associated proteins [BR:
phyp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113537696 (vps54)
Membrane trafficking [BR:
phyp04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
113537696 (vps54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
EXOC6_Sec15_N
YqzH
Motif
Other DBs
NCBI-GeneID:
113537696
NCBI-ProteinID:
XP_026788123
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MASGPGSVPVVQPGVGPAGTDRLFRKPRDLMGSSTHYRPPRSLPDVCPKEPTGEARGLSD
APSVVADQHRWTVYNSKVNLPAALNDPRLAKRESDFFTKTWGLDFTEGEVMPSYSLPNIT
AEHFSTYLNDTAQREKIHERCKNICPNKDDLSIPNITNNHDKAKEELEQVPKIFMRPDFV
LSDPATFSAVLPWSHFSVAGGKSGRDAASSRLLQEKLSHYLDVVEVSIARQISLRSEAFF
HAMSSQRELQEQLCEAAGAVRALREHTASMGRTMSLGPLRALRHTVTRKNCVTLHSKLKL
MAAVQQTQPTVQLLLSTSEFVGALELINTTKEVLQQELQGIHSFRHLGSQLCEMEKLIDK
MMVADFTTYSRSDLSRTFEDDNQVLEKDRLQSLVFGLLRQRKLDFLDIYSEEMMQAAKGI
VRQCVIKSVSQIEDIDTDTVVKLQDQMRLMTFAQWFELLKNVFEYFLLFLTRIKATLGVI
RNVVLEILDSSQRNRAADACALADGGSAENEDEEEDEESGLRPGEAELAFLTHEGLFISD
ALNEAERRSNGASTQTRTQAKEEASGSDSASGTTESSSSREHITNTTSSLTTGGAAALED
LMPSDLELGRIANNIQELLYTASDISHDRCVKVLLAKAK
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccggaccgggctcggtgcccgtggttcagcccggcgtgggccccgctggcact
gaccggctcttccggaagcccagagacctgatgggttcgtctacacactacagacctccg
cgctctctccctgacgtctgccccaaggagcctacaggtgaggcgcgcgggctgagtgac
gctccgtcagtggtggcggatcagcaccgatggacggtatataactctaaggtgaacctg
ccggcggcgctgaacgacccgcggctggccaagcgcgagtccgacttcttcaccaagacc
tggggattggacttcaccgagggggaggtgatgccctcgtacagcctgcccaacatcaca
gccgaacacttcagcacgtacctgaatgacactgctcagagggagaaaatccacgagcgg
tgtaaaaacatctgccccaataaagacgacctctccatccccaacatcacaaacaatcac
gataaagccaaagaggagcttgagcaggtgcctaagatcttcatgaggcctgacttcgta
ctgagcgacccggccaccttcagcgccgtgttgccgtggtcgcacttcagcgtcgccggg
gggaagagcggccgggatgccgcatcgtcacggttactgcaagagaaattgagtcactac
ctggacgtggtggaggtgagcatcgcgagacagatctctctgcgctccgaggcgttcttc
cacgccatgtcgtctcagcgcgagctgcaggagcagctgtgcgaggcggcgggcgccgtg
agggcgctgcgggagcatacggccagcatggggcgcaccatgagcctcgggcctctgcgg
gcgctgcggcacacggtcacgcgcaagaactgcgtcacgctgcacagtaaactgaagctg
atggcggcggtgcagcagacacagcccaccgtgcagctgctgctctccacctccgagttc
gtgggtgcgctggagctcatcaacaccaccaaagaggtgctgcagcaggagctccagggc
atccacagcttcagacacctgggctctcagctgtgtgaaatggagaagctgatcgataag
atgatggtggccgatttcaccacttactccagaagcgacctcagccgaaccttcgaggac
gacaaccaagtgctggagaaggaccggctgcagtctctggtctttggcctgctgagacag
aggaagctggatttcctggacatctacagcgaggagatgatgcaagcagcgaagggcatc
gtcagacagtgtgtgataaagtcggtgtctcagattgaggatatcgacaccgacactgtc
gtgaaactacaggatcagatgaggttgatgacgtttgctcagtggtttgagctcctgaag
aacgtgtttgagtatttcctgctcttcctcaccaggatcaaggccactctcggggtgatc
cgaaacgtggttctggaaatcctcgacagcagccagaggaaccgagcggctgacgcatgc
gcgctcgctgacggcggctccgcggagaacgaagacgaggaggaggacgaggaatcaggt
ctccgtcccggagaagccgagctcgccttcctcacacacgaggggctgttcatcagcgac
gcgttaaacgaagccgaacgccgcagcaacggcgcgtccactcagaccagaacgcaagcg
aaagaggaagcttcgggaagcgactcagcctcgggcactacggagtcgtcctccagcaga
gagcacatcacaaacactacctcctccctgaccacagggggcgccgctgcacttgaggat
ctgatgccatctgatctggagctgggcagaatcgccaacaacatccaggagctgctgtac
accgcctcggacatcagccacgaccgctgtgtcaaagtcctgctggctaaggccaag
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