Pangasianodon hypophthalmus (striped catfish): 113537752
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Entry
113537752 CDS
T05759
Symbol
sorcs3
Name
(RefSeq) VPS10 domain-containing receptor SorCS3 isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113537752 (sorcs3)
Membrane trafficking [BR:
phyp04131
]
Endocytosis
Others
Others
113537752 (sorcs3)
Endosome - Lysosome transport
113537752 (sorcs3)
Endosome - Golgi transport
113537752 (sorcs3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
113537752
NCBI-ProteinID:
XP_026788186
LinkDB
All DBs
Position
Unknown
AA seq
1224 aa
AA seq
DB search
MDHSLSGMYLTLCTWLVCSLHLCAITRAEVTCASCPLPTLVKTGDVQNHARAMTRAAAGK
SPVGLARTRLQPGLEGVHELGKDASASRAPNSREVEVTARSPEPGSGAKTPPEQTARRLR
DHEEAANKASASLRRRRSAAQLDEFGASARSGDSAESPDALLFVDGQKLRRNRDEGKVAT
SRSEDPKVSSSTFALAGDSAHNHAVVYWTGQNSSVILILTKLYDFHLGSVTESSLWRSTD
YGTTYERLNDKVGVKTVLSYLYVCPTNQRKVMVLTDPEFESSVLISSDEGASYQKYRLSF
YVLSLLFHPSQEDWALAYSHDQKLYSSFDFGRKWHLVHERVTPNRFYWSVSGLDKEADLV
HMEAYTSDGHCQYMTCRAQACYESSRTFPFPGYIEPNSLVVQDDYIVIQVTMSGRASYYV
SYQRGPFVRIKIPKYSLPKDMHILSTDQGQVFAAVQEWNQNDTYNLYISDPHGVYFTLAL
ENVKTTRGLGGNSMIDLYEVAGIKGMLIANRKLDNQVKTYITYNKGRDWRLLQAPTTDLE
GNEIYCVQPFCSLHLQLQMSENPYVSGSIITKNSVPGVIIAIGNMGSELSYNNVGMFISS
DAGNTWRQIFDEEHNVWFLDKAGALLAVKQPTVPTRHFWISFDEGRQWTHHIFSAMPLFV
DGVLVEPGMENQILTFFGHFSDRSEWQLIKIDYKSLFTKRCAEGDYQTWHLHNQGEPCVM
GQKQIFIKRRPGSYCMMGKDTRILSAEPCICRAHDFECDYGYERRGDGNCLPAFWFNPST
VSRSCSQGQNYFNSTGYRKVAANNCTKGVKEMYTARKQQCPNRAPRGLHLTTRDSTLKAN
MGSNVTFIVQLEEGDSMRTNIQLDFGDGTAVSYSNLSWTEEGIRHVYRSTGIFRVTAIAE
NSLGSDSSSLYLHVTCPVEHVQLLAPFVVIKNKEVNLTAVVWPSHSRTLTYFWWLGNNTE
PMITLEGSISYVFPVEGTYMVTVQVSSSSSILQDTKQIVVQEFFKSLLLSFSPNLDEANP
DIPEWRHDVGRIIKKAVLQIADIPAEQLLVAVFPGLPTAAELFLLPSKNQSDSRKGSEED
LEQISEILANALNQNLVEFELKPGSGVIVYITQLTLAPLVDSIPRHSSSAMLMLLSVVFL
GLAVFLIYKFKRKIPWINIYAEVNQEKEQEMIGTVGQNDTTPKIKLSEFSSPKELMEKDL
EVRVKRGMINACESTREIPNCTSV
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atggaccactcgttatctggcatgtacttgactctgtgcacttggcttgtttgctctttg
catctttgtgccattaccagagcggaggtaacttgcgcctcgtgcccgttacccacgctt
gtcaaaactggggatgtccaaaaccatgcacgcgccatgactcgcgcggcggctgggaaa
tcacctgtcggtttggcgcgcacgagactgcaaccgggtctggaaggagttcatgagttg
gggaaagacgcgagcgcgagccgcgcgccaaactcgagagaagtggaagtgacggcgcgc
tcacccgaaccgggctccggtgcaaaaacaccgcccgagcaaactgcacggcgactccgg
gaccatgaggaagcagctaacaaagccagtgcgtcgctgagacgcagaaggagcgcggcg
caactggatgaatttggcgcaagcgcgcggagcggagattccgcagagtccccggatgcg
ctgctgtttgtggatggacagaaactgcgacgcaaccgcgacgagggaaaagtggccact
tccagatcggaggatcccaaagtgagcagtagcactttcgccctggctggagactccgct
cacaaccacgctgtcgtttactggaccggacagaacagcagcgtgattctgatcctgacc
aagctttatgacttccacttgggcagcgtcactgaaagctccttatggagatcgacagac
tatggcaccacctatgagagactgaacgacaaagtgggagtgaagacagtcctgagttac
ctgtacgtctgtcccaccaaccaaaggaaggtaatggtgttgacagacccggagttcgaa
agtagtgtcctcatcagttctgacgagggtgctagctaccagaaataccgtctcagtttc
tacgtcttgagtctactttttcacccttcacaagaggactgggctctggcctacagccac
gaccagaagctgtacagctcatttgactttggacggaagtggcatctcgttcacgaacga
gtgacccccaaccgcttctattggtctgtaagtggtctagataaggaggccgatctggtg
cacatggaggcgtacacttctgatggacattgtcagtatatgacatgcagggcccaggct
tgttatgaatcgagcaggacgttcccattccccggctacatcgagccaaactcgctggtg
gttcaggatgactacattgtcattcaggtcaccatgtctgggagagcctcttattatgtg
tcttaccaaaggggaccttttgtgcgcatcaaaatacctaaatactcccttccaaaagac
atgcacatcctgagcacagatcaaggtcaggttttcgccgctgtccaagagtggaatcag
aacgacacgtacaacctgtacatctcagatcctcatggtgtttacttcactctagctttg
gaaaatgtcaagaccacccgaggtcttgggggcaacagtatgatagacctgtatgaggta
gcaggaatcaaaggcatgctgattgctaatagaaagctggacaaccaggtgaagacgtac
atcacttacaacaagggccgggactggaggctgctgcaggcacccactacagacctggag
gggaatgagatttactgtgtgcagccattttgttcgctacacctacagctgcagatgtca
gaaaacccttacgtctctggaagtattatcaccaagaactcggtgccaggagtgatcatc
gctataggcaatatgggctctgagctctcctacaataatgttggaatgttcatatcatca
gatgctggcaatacttggagacagatatttgatgaggagcacaatgtttggttcctggat
aaagcaggagctttacttgcagtcaagcagcccacagttcccacaaggcatttctggatc
agctttgacgaagggagacagtggacacatcatattttctcagccatgcctctgtttgtg
gatggcgttctggtcgagccaggcatggagaatcagattctgacgtttttcggacacttc
agcgatcgctctgagtggcagctgatcaaaatcgactacaagtccctgtttaccaagcgc
tgcgcagaaggagactaccaaacgtggcacttgcacaatcagggtgagccgtgcgtaatg
ggccaaaagcagatcttcatcaagcgccgtccgggcagctactgcatgatgggaaaggac
accaggatcctatcggctgagccttgtatctgtagagcgcatgattttgagtgtgattat
ggctatgagcggagaggagatggtaactgtctgcctgcgttctggttcaatccttccact
gtatcacggagctgcagtcaaggccagaactacttcaacagcacaggttatcgcaaagta
gcagcgaacaactgcaccaaaggggtgaaggagatgtacacagccaggaaacagcagtgt
cccaatcgagctcctcgaggactgcacctgacaacccgtgacagcaccctgaaagcaaat
atgggctccaacgtcacctttatagtacaactggaagagggagactcaatgaggactaat
atccaattggacttcggggatgggacggcggtgtcctactctaacctcagctggacggag
gagggtatcagacatgtgtaccgcagcacaggaatcttccgggtcactgccatcgctgag
aacagcctgggatctgactccagctccctgtacctgcacgtgacttgtcctgttgagcat
gtccagttgctggctccatttgtggtcattaagaacaaggaagtgaacttgactgcagtg
gtctggccgtctcactctcgaactctcacctacttctggtggctggggaacaacacagag
ccaatgatcactctagagggcagtatatcctacgtgtttccagtggaggggacgtacatg
gtaacggtgcaggtctcatcatccagctccattcttcaagacaccaaacaaatcgttgtg
caagaattctttaaatccctgcttttatcgttttctccgaatctggacgaggccaatcct
gacatcccggagtggaggcacgatgtaggcaggataattaaaaaggctgtgctccaaata
gccgatattcctgccgagcagctcctggtggcggttttccctggacttccaacagctgct
gagcttttcctgcttcccagcaagaaccagtcagacagcaggaaagggagcgaggaggat
ctggaacagatctcagaaatcctcgccaatgcattgaaccagaacctggtagaatttgag
ctgaaaccaggatccggagttatcgtttacatcacacagctaacattagctccactggtg
gactcaatccctagacacagcagttctgccatgctgatgctcctctctgtggtgttcttg
ggtttagctgtgttcctcatttacaaattcaagagaaaaattccctggattaatatatat
gctgaagtgaaccaagagaaagagcaggagatgatcggcacagtgggtcagaacgacaca
acacccaaaattaagctcagcgagttctccagccccaaagagcttatggagaaggacttg
gaggtccgtgttaaacgtggaatgatcaatgcctgcgaaagcacaagagagattcccaac
tgtacaagtgtctga
DBGET
integrated database retrieval system
