Pangasianodon hypophthalmus (striped catfish): 113537920
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Entry
113537920 CDS
T05759
Symbol
ift52
Name
(RefSeq) intraflagellar transport protein 52 homolog isoform X1
KO
K19681
intraflagellar transport protein 52
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
phyp03037
]
113537920 (ift52)
Cilium and associated proteins [BR:
phyp03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
113537920 (ift52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
OST48_N
Motif
Other DBs
NCBI-GeneID:
113537920
NCBI-ProteinID:
XP_026788428
LinkDB
All DBs
Position
Unknown
AA seq
443 aa
AA seq
DB search
MDKEQRNIVVFNSSKRELFTATTGYKSLQKRLRAQWKIQGIKEEITAEKLHGVKLWITAG
PREKFTEAELQVLKQYLDGGGNVLAMLGEGGEVKYDTNINFLLEEFGIMVNSDAVVRNVY
YKYFHPKEALVSNGILNREISRAAGKVVTGVIDDESPGNNTHSNRNITRALTFVYPYGAT
LSVMKPAVAVLSTGSVCFPLNRPVLAFSKVEKNAGKLAVLGSCHMFSDQYLDKEENSKIM
DVVFQWLTTDNIHLNQIDAEDPEIADYTMLPDTGYLSERLRVCLQEGEENPRDFTSLFDM
SLFRLSTDSLPSVIRAYKQLHVKHEPLQLITPQFETPLPPLQPAVFQPAFRDLPPPMLDL
FDLDETFSSEKVRLAQLSNKCTDDDLEFYVRKCGDILGVTGKLDKEKRDAKHILEHIFFQ
VVEFKKLNQEHDIDTAQTRFSPC
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggataaagaacagcggaatattgtcgtttttaattcgtctaaaagagagctgtttact
gccaccaccggctacaagagtcttcagaagagactgagggcgcagtggaagattcagggc
atcaaagaggagatcacagccgagaaactgcacggtgtgaagctgtggatcaccgcaggt
cctcgagagaagttcactgaagcagagctgcaagtcctgaagcagtatctggacggtggc
ggaaatgttctcgcgatgctcggagaaggcggagaagtgaaatacgacactaacatcaac
ttcctcctggaagagtttggtatcatggtgaacagcgatgctgtagtgagaaacgtttac
tacaaatacttccatcccaaagaggcgctcgtgtccaacgggattctcaacagagagatc
agccgagcagccggcaaagtggtaacgggagtcatcgatgatgaaagtccagggaacaat
acgcacagcaacagaaacattacaagggctctgacgttcgtgtacccgtacggagctacg
ctgagcgttatgaagcctgcagtggcggttctgtccaccggttccgtgtgcttccctctc
aacagacccgttctggccttctcaaaggtcgagaagaatgcaggcaagctggcagttctg
ggttcatgccacatgttcagcgatcaatacctggacaaggaggagaacagtaaaataatg
gatgttgtgttccagtggctgactaccgacaacattcacctgaatcaaatagatgccgaa
gatcccgagatcgcagactacaccatgttaccagacacaggatacctgtctgagagactc
cgagtgtgtctacaggaaggcgaggagaacccacgcgacttcacctccctcttcgacatg
tctctctttaggctgtccacagactccctcccgagcgttatcagggcctacaagcagctg
catgtcaaacacgagccgctgcagttgattacgcctcagtttgaaacgccgctgccgcct
ctgcagcctgcagttttccagccagcctttagggacctgcccccaccgatgctcgacctt
tttgacctcgacgagacattttcttcagagaaagtgcgacttgctcagctgtcaaacaaa
tgcactgatgatgatctcgagttttacgtgcggaaatgtggagacatcttaggagtcacg
ggaaagctggataaagaaaagcgagacgccaagcacatcctcgaacacatcttctttcag
gtggtggagtttaaaaagctgaatcaggagcatgatatcgacacagcacagacgaggttt
tcgccatgctga
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