Pangasianodon hypophthalmus (striped catfish): 113537942
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Entry
113537942 CDS
T05759
Symbol
prdm2
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp00310
Lysine degradation
phyp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
113537942 (prdm2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113537942 (prdm2)
03036 Chromosome and associated proteins [BR:
phyp03036
]
113537942 (prdm2)
Enzymes [BR:
phyp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
113537942 (prdm2)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
113537942 (prdm2)
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
113537942 (prdm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2_4
zf-C2H2
SET
PyrI_C
zf-C2HE
zf-C2H2_6
zf-C2H2_ZNF462_1st
zf-CHCC
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
113537942
NCBI-ProteinID:
XP_026788487
LinkDB
All DBs
Position
Unknown
AA seq
1728 aa
AA seq
DB search
MAVSGGTSETLVDVPAHVWRGLPDGLRLGTSAVNPNRIGVWASCLIPKGKKFGPFVGERK
KRSQVTSNVYMWEVYFPTRGWMCVDATDPVKGNWLRYVNWACSSEEQNLFPLEINRAIYY
KVLRPIAQDEELLVWYNGEDNPEIAAALEEERNSNFHKKNSPRAKRARKKLLEKARQAGL
GRLSGHKPLSTTRPVVTAMRDSDKGINTEEERPSVSSDSAQETAASLISPTETRDISLSP
VHTVLDQTEREKSNQGELQPHGSLEYSAESQSGNRSEQPDPESIFGHSVKESSESPLHEV
ASVSPLVSPELDAEGDPDFEDDAQGGNYHCQYCERQFSSKQSLEHHIDTHTIRNHQTLTF
KCRYCAKPFGSQVGKRRHERRHENGSKGLKRPGSFAGTAFVLNPSGCNDSPVSASVTSPN
STIVSSQNSPPHLSSDALTKDAGVEPDQSLVLEENGESKELHPCKYCSKAFGTHTNMRRH
QRRIHERHLMPKGVRRKGILLQDIPSQQLQQGQSSVLQEASPHNSPPLIYVPSVDTDDEG
EREDSMVDVSKNISENLSLYIDGKILSTSAVSSCEVIEVDSGSPALFGLDAVILNPTQIS
QALQLETQPCHVKELSVIDQAVPKRRTSTPPLLPTVKTEPDTMSYTASSSSTSSQSPSLG
GNIFPQPTETLALQKEKTIYLSPKLKQLLQTQDSQKPTLALITDSRKLTTPLSVSSLPVA
QGRFKRRTASPPTHVQNSSSAIIESSIIETGDSFALMVPKVESHCMSYSWSISSKEQRDC
MSPSGKDWPVLVSGGSSCNQQPLDLSGAVGKRGGSISKGTTESVLDLSIHRKSVTDHKTK
ASILLQSHVKRKKPNTSMLEKVLMNEYSGLSSAGEESSPCLGSPDTHLSSGSTTGVSPSS
VCSNSEHPPCESVSPPSLTPVTMNPSSPSSSSQASSTPPPPVLPTVPSPPPLSQFSDSAF
PKLSPKPVYHMVDEMSGSPKVKETCLDMKNLDDKDFNQTAKQLPLTTDALPRSPEHTKSH
CNADSFSKSETLLKGSTSDPDLYLLKNTNNVISLHEKNIDSKAIQSSSFDVLSPQDHNIA
TDVCQKLQSAHSPVHLAPNVDSLSSSHTVVADSNIEPLADDALVTDKHMMEDAVESTTND
DYGGFSSRVPEKTPDGADTLEQDTFTKSFVCNVCKDPFHSIKQLSNHIIDHAVEWPFKCE
FCVQLFQNSAALLEHRSSLHGVGRIYCCPICAKEFAFLCNLQQHQSDLHPGQSHAHTMVE
NGKLRPQNYTDPAQVNMERNSLHLTPDTTVDVAPQDSRELFNYSSVKAEGDGEEQEDPTE
ELYTTIKIMASEAGKPKCPDVRLGINQHYPSFKPPPFPYHNRTPAASVASATNFTTHNIP
QTFSTAIRCTKCGNSFDNMPELHKHILACANASDKRRYTPKKNPIPLRQIVNQPQNGVVS
PIAAAIGGQNAFRRMGQPKRLNFSQEVPTKMKMSALNKKKNQLVQKAISQKNKAATSVKK
AFIQAEEQEVQACPYCSREFTYAASLAKHIACSCPQKPVSKKKKGALMPQDKNMKLRSRT
TDSEIKQEGNLGLAVKPLVKTRTRSSELLEGEVTSGSNGKTGTPQIRVKRPASNKDHSAP
KSKKGRKSKPQPSVLTSSLTLASQPGAKMQRGGKDMALKKEAETKPQVQHKKEKRFSKRM
RERVGGPVTRSLQMASAAPPGEVKTEDPPVSEPVHGEHKVPRKESCLS
NT seq
5187 nt
NT seq
+upstream
nt +downstream
nt
atggctgtatctgggggaacatctgaaaccctggttgatgttccagcccatgtgtggaga
ggccttccagatggcctgagactgggaacatcagctgttaatccaaatcgtataggtgtc
tgggcatcttgtctaattcccaaaggcaaaaagtttggtccttttgtaggagaaaggaag
aagaggtctcaagttaccagcaatgtttacatgtgggaggtatattttccaaccagggga
tggatgtgtgtggatgccacagacccagtgaaaggaaactggttgcgatatgtgaactgg
gcatgctcatctgaagagcagaacctgtttcctctggaaatcaacagagcaatttattac
aaagtgttgaggccaatcgcgcaggacgaagaactgcttgtgtggtacaatggagaagac
aacccagagatagcagctgcattagaggaagaaaggaacagcaactttcacaagaaaaat
tcaccaagagcaaagcgagcaagaaagaagctattggaaaaagccagacaggctggtttg
ggaagattatctgggcataagccattgagcacaacaagacctgtagtcacagcgatgcgt
gattcagataaaggaataaatacagaggaagagagaccctctgtgtcttcagattcagct
caggagaccgcagcttcacttatatcccccacagagaccagggacatttctctgtctcct
gttcatacagtgttggaccagacggagagagagaagtcaaatcaaggagaactgcagcca
catgggagccttgagtactctgctgagtcacagtcaggaaacaggagtgaacagcctgac
ccagaatcaatttttggccactctgtcaaggagagttctgagagtccattgcatgaagta
gcatcagtttcacctttagtttccccagagctggatgcagagggggaccctgactttgag
gatgatgcacagggtggtaactatcattgtcagtactgtgaacgtcagttctcctccaaa
caaagcctggagcatcacattgacactcacactatcagaaaccaccagaccctcaccttt
aaatgcagatactgtgccaagccatttggttctcaggtgggcaagcgccggcacgaaaga
cgacacgaaaacgggagtaaaggcctgaaaaggcctggatcatttgctggaactgcattt
gtcctcaatccttctgggtgtaatgactctcctgtatctgctagtgtgacatctccaaac
tccaccattgtaagttctcaaaacagtccgcctcacctaagctcagatgctttgaccaaa
gatgctggagttgagccagaccagtctcttgttttagaagagaatggggaatcgaaagaa
ctgcacccctgtaaatattgcagcaaggcttttggcactcataccaacatgcgcagacat
cagcgcagaattcatgaacgtcatctcatgccaaaaggagtccggaggaaaggaatactc
ctacaggatattccatcccagcaactacaacaaggtcagagctcagtactccaggaggca
tcaccacataatagccctccacttatctatgtgcctagtgtagacacagatgatgaggga
gagcgagaggacagcatggttgatgtttccaaaaacatctcggagaatctcagcctttat
atagatggaaagatcctatccacaagcgcagtcagcagctgtgaagtcatagaggttgat
tcaggtagtccagcattatttggtcttgatgcagttatcttgaatcctacccaaataagt
caggctctccaacttgaaacacagccttgccatgtgaaagagctttcggttattgatcaa
gctgttcctaaaagaagaacttctacaccaccactccttcccactgtgaaaacagaacct
gataccatgtcatatactgcgtcatcatcatctacttcctcacaatcaccttctttggga
ggtaatatcttcccacagcccacagagacactggctttacaaaaggagaaaacaatttat
ctttctcccaaattaaaacagcttctgcagacgcaggacagtcagaaaccgacccttgct
ctaataacagatagccgtaaattgactactccactttccgtatcctctttgcctgttgct
cagggaagatttaaaagaaggactgcttctcctcctacacatgtacagaatagctcatca
gcgatcattgagagctcaatcattgaaaccggggattcttttgcccttatggtaccaaag
gttgaaagccattgcatgagctattcctggagtatatccagcaaagagcagagggactgc
atgagtccttctggaaaggactggccagtcttagtaagtggaggcagttcttgcaatcag
cagcctcttgacctttctggtgctgttggtaaacgaggtggcagcataagcaaaggaact
actgagtctgtgctggatttaagcatacaccgtaagagtgtgactgaccacaaaacaaaa
gcaagcatattgttacagtcacatgtcaagcgaaagaagcccaataccagcatgttggag
aaagtattaatgaatgagtactctggcttaagctcagctggagaggagagctctccttgt
cttggaagcccagacactcacttgtcctcgggcagcaccacaggtgtgtctccatccagt
gtgtgttcaaactcggaacaccctccttgtgaatctgtctctccaccttccctgacccct
gtgactatgaacccttcttccccatcatcctctagccaggcatcctctacacccccacct
ccagttctgcccacggtcccttcacctccacctctttctcagttttcagattctgctttt
cccaaattgtctcccaaaccggtttatcatatggtagatgaaatgtcagggtcccctaag
gtaaaagaaacatgccttgatatgaaaaatctggatgataaagacttcaaccaaactgct
aagcagttaccacttacaactgatgcactgcctcgaagtcctgagcacacaaaaagtcat
tgtaatgcagattccttttccaaatctgaaacactacttaagggctcaacctcagatcct
gacttatatttgctaaaaaatacaaacaatgttatttctttgcatgaaaagaatattgac
tccaaagccattcagagtagttcctttgatgtactttcccctcaagaccacaatattgca
actgatgtgtgtcaaaaactacaatccgctcactctccagtgcacttagctccaaatgtg
gactcactttcatcttctcacactgtagtggcagattctaatatagagccattagctgat
gatgcactagttactgataagcatatgatggaagatgcagttgaaagcacaaccaatgat
gattatggaggtttctcatctagagtgccagaaaagacaccagatggagcagacacctta
gaacaggacacatttacaaaaagttttgtgtgtaatgtctgtaaggatccttttcactct
attaaacaacttagcaaccatatcatagatcatgctgtagaatggccttttaagtgtgag
ttttgtgtgcagttatttcaaaattctgcagctcttttggagcatcgttcctctctccat
ggagttgggagaatttactgttgcccaatctgtgccaaagagtttgctttcctctgcaac
ctccagcaacaccagagtgacctgcatcctggtcagagtcatgctcacaccatggtcgaa
aatggcaagctcaggcctcagaattacactgatcctgctcaggtgaatatggagagaaat
tctttacatttaactcctgacacaactgtagatgttgcccctcaggactcacgtgaatta
tttaactatagtagtgttaaagcggagggtgatggcgaagaacaagaggatcccacagaa
gagctgtacactacaataaagattatggcctctgaagccggaaagcccaaatgcccagat
gtacgccttggcatcaatcaacactaccccagctttaagcctcctccatttccctaccac
aaccgaacacctgctgcctctgtagcctctgcaactaacttcaccacccacaacataccc
cagacattcagcacagcaatcaggtgtaccaaatgtggcaatagctttgacaacatgcct
gagctccacaaacatattttggcttgtgctaacgcaagcgataagagacggtacacacca
aaaaagaaccctattcctctcaggcagatagtgaatcagcctcagaacggcgttgtctca
cccatagcagcagccatcgggggacagaatgccttccgtaggatgggccaacccaaaagg
ctcaacttcagccaggaggtacctacgaagatgaagatgtctgccctgaataagaagaaa
aaccagcttgtccagaaggctatatctcagaagaacaaggctgctacttctgtaaagaaa
gctttcattcaggcggaagagcaagaggtgcaagcgtgtccatactgcagtcgagaattt
acatatgctgccagccttgcaaagcacattgcatgcagttgtcctcagaaaccagtttct
aagaaaaagaaaggagccctaatgcctcaggataaaaacatgaaactcagaagtcgaaca
acagactccgaaatcaaacaagaaggcaacctgggcctggctgtgaagccattagtaaaa
acaaggacccggagctcagagttgttagaaggtgaagttacatcgggtagcaatggtaaa
acagggacccctcagatacgtgtcaagagaccagcttcgaacaaagaccattcagccccc
aaaagcaagaaaggcagaaagagcaagcctcaaccttcagttctgacctcatcactgaca
cttgcatcacagccaggtgcaaaaatgcaacgtggtgggaaagatatggctctcaaaaaa
gaggctgagacaaaaccacaagtacaacataaaaaagaaaagcgtttctcaaagagaatg
cgggaaagagtaggtggcccagtgacacgcagtctgcaaatggctagtgctgcaccacct
ggagaagtgaagactgaagatccaccagttagtgaacctgtacatggagaacataaggtg
ccaagaaaagaatcctgtttaagttag
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integrated database retrieval system
