Pangasianodon hypophthalmus (striped catfish): 113537989
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Entry
113537989 CDS
T05759
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
113537989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113537989
Enzymes [BR:
phyp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113537989
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113537989
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DTC
KH_DTX3L
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
RING_XB3-XBAT31
zf-RING_4
zf-rbx1
zf-RING_11
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
113537989
NCBI-ProteinID:
XP_026788574
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MEERMETDDYQNADAESEDMDMDNNGAEVTSSSSGNQSPPDSPVVTTQPGRIQPQHPDQT
SPGEKQNQEVLGTADLGGSSPGVLPAAQISSSVSDYPSAVPEGQQQHHPGMAASQERDLN
TSGDWTHPSVASQINSLNLSKCPTAEETPNEPTNAGDVPEDQKIDLYRSAEEQNPPAAAA
DVPQTSSSASKSSDTTRRKCSVDQKKDTRDSDELKPSAPRDVAKFYVKVDWPEDLPQKWK
NLLQKALQTWCNSEAKERERCSVEVVRLLGDGCTAEVEITPSTALKDIKTATLTFRSLEK
SATVHFQEAEPKSVNKVSRQKENMTETAVTATETTPPELMKDAGAASNEMTGASDAFTVP
PFLYWYLSQAYRKELEQFENVFGVKINAETRLSLSAAKAMVKSESDSFSKATQAFSTLVQ
NTTKNLKSVSVPQTHMQSDIMKETLRNIPNEEHRIMLSMSANEYLLFGPGEMTSVVEKRI
KLEPGDDLATPFSHRESHNMETSSSRTSVQTPKNLDMDIKDTQAAVEMDVAHWQLLKIAF
EKQISEIQNKYGVQFDAEPVHGSVKVSARSRGTHQVNLEAHALRALTHLYQKVVTSAVTC
DLKDASSTEIVSQALERIRSQHACVGGGERNGSWKLFGLPKHLLPAIADIEKITGVTVFD
EKVKKLLGYPSDFPQAGGFQWGQTGMDVMRGAHGTDPRGGTENSDFNQEFQNKAKENGKE
KESEDNCPICLDTFTQKSKLTCGHEFCEECLKQSIKSSGEICPLCKKIFGILKGNQPDGT
MHVQHCQYRNLAGFPQCGTIEINYIIPDGIQTNEHPNPGKRYHGTRRTAYLPDNAEGNHV
LQLLRRAFDQKLIFTVGFSRTTGVDDVVIWNDIHHKTNTYGGPESYGYPDPDYLKRVKEE
LKAKGVE
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggaagagagaatggaaacagatgattaccaaaatgcagatgctgaaagtgaagacatg
gacatggacaacaatggggctgaagttacatcatccagcagtggaaatcaatcaccacct
gacagccctgtcgttactacacaacctggcaggattcaaccccaacatcctgaccaaact
tctcctggagaaaaacagaatcaggaggtcttgggtacagcagatctgggaggatcaagt
cccggggttctacctgctgcccagatttcttcctcagtgtctgattatccttctgcagta
cctgagggacaacagcagcaccatcccggcatggcagcttcacaagagcgggatctgaat
acatcgggtgattggacacatccctctgtcgcttctcagataaactcgctaaatcttagc
aagtgtcctacagctgaggaaacgccgaatgaacctacaaatgctggagatgttccagaa
gaccagaaaatagacctgtacagatcagctgaagagcaaaatcctccagctgctgctgca
gatgttccacagacgtcctcatcagcgtctaagagttctgatacaacacgcaggaaatgt
tctgttgatcagaagaaggatacaagagatagcgatgagctaaaaccctcagcacctcgg
gatgttgcaaagttttatgtgaaagtggactggccagaagatctacctcagaaatggaaa
aatcttctgcaaaaagctcttcagacctggtgtaactctgaagcaaaagagagagagaga
tgcagtgttgaggtggttcggcttttaggtgatggatgcactgcagaggtggagatcacg
ccatcaactgctttaaaggatataaaaactgcaacattaacattcaggtcgcttgagaaa
agcgccacagtacactttcaggaagctgaaccaaagtctgtgaataaagtttccaggcaa
aaggagaacatgactgagacagctgtgactgctacagaaacaaccccacctgagctcatg
aaggatgcaggagctgcttctaatgagatgactggagcttctgatgcttttactgtccct
ccctttctatactggtacctgagtcaagcttacaggaaggagctggaacaatttgagaat
gtgtttggagttaaaataaatgcagaaacacgtctttcactctctgctgcgaaagctatg
gtgaagagtgagagtgattctttcagcaaagctactcaggccttttctactcttgtccag
aatactacaaagaatctcaaatctgtttctgtccctcaaacacacatgcagtctgacatc
atgaaagagacactgcgtaatattccaaatgaagagcacaggatcatgctaagcatgtca
gcaaatgaatacctgctgtttggaccaggagaaatgacatcagtggttgagaagcggata
aaattggaacctggtgatgatctagcaacaccatttagccacagagagtcacataacatg
gagacatctagcagtaggacttcagtgcagaccccaaagaacttggacatggacatcaag
gacactcaagctgcagttgagatggatgtggcacactggcaactgctgaagattgcgttt
gagaaacagatttctgagatccaaaataaatatggagttcagtttgatgctgaacctgtc
cacggctcggttaaggtgtcagcacggtccagaggaactcatcaggtcaatctcgaagct
cacgccctcagagccttaactcatctctaccaaaaggtcgttacatcagcagtcacctgt
gatcttaaagatgcttcctccactgagatagtgtcccaggcacttgaaagaattcgctct
caacacgcctgtgttggtggaggggaaagaaacggaagctggaaactttttggactgcca
aagcatctccttcctgccatagctgacattgagaagattactggagtcactgtatttgat
gagaaggtgaagaaattgctcggatatccatcggattttccacaagcaggtggatttcag
tggggacaaacagggatggatgtgatgagaggggcacacggcactgacccgagaggtgga
acagagaattctgatttcaaccaagagttccaaaataaagcaaaagaaaatggtaaagaa
aaagaaagtgaggataattgtccgatttgcctggatacgtttactcagaagtcaaaactg
acatgtggtcatgagttctgtgaagagtgtctgaaacagtcaataaagagcagcggagaa
atttgccctttgtgtaagaaaatctttggaatattaaaaggaaaccagcctgatggaaca
atgcatgtccaacattgccaatacaggaacctcgctggctttcctcaatgtggcacaatt
gaaattaattacatcataccagatggcattcagacgaatgaacatccaaaccctggaaaa
cgttaccatgggactcgtcgcactgcgtacttaccggacaacgctgaaggaaaccacgtg
ctccagctgctgagaagagcttttgatcagaaactcatctttactgttggattctccaga
acaactggagtagatgatgtggtcatctggaacgacattcatcataaaacaaatacatac
ggtgggccagaaagttatggctatccagaccctgactacttaaaaagagtgaaagaagag
ctgaaggccaaaggcgtcgagtaa
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integrated database retrieval system
