Pangasianodon hypophthalmus (striped catfish): 113538000
Help
Entry
113538000 CDS
T05759
Symbol
rpn2
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 isoform X1
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp00510
N-Glycan biosynthesis
phyp00513
Various types of N-glycan biosynthesis
phyp01100
Metabolic pathways
phyp04141
Protein processing in endoplasmic reticulum
Module
phyp_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
113538000 (rpn2)
00513 Various types of N-glycan biosynthesis
113538000 (rpn2)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113538000 (rpn2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribophorin_II
Ribophorin_II_3rd
Ribophorin_II_C
Ribophorin_II_2nd
DUF5859
Big_3_2
Motif
Other DBs
NCBI-GeneID:
113538000
NCBI-ProteinID:
XP_026788590
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MALLRLVSIVVSILALGAWALNPTHHLTASDVDRLQAVLEQPFTDLKSAYLSIVGLSKLG
VSVPDSDEACNFITSNLDSSSIESLFYAAEASEVLSSCEIHVSNETRDLLLAAVSEDSTI
SQIHQAVSALSSLGLPMASQEVVSALKARIAKEDNVMAIIQALQAASRLSQQAELGDILE
EIEDLAARLDDLGGVYLQFEEGLEATALFVSSAYALSDYMDVEPPLKEDQVIQLVNSIFS
KKSWDSLSEAFSVASAAAALSNNRFHKPVIVNALGSAAVSHSQPLLQLQVTDVLCQPLSS
ANVLVESATSVSSKAVVLSQTPFTLHDDVFELNFMASQPASGYYQFSVAVTGDSRLVANQ
IDLKVKVSTKVAINNMDLSVVDKDQSIGAKTTRVEYPNKAKTSFLADSHQNFAMSFQLVD
EATGVELTPHQTFVRLHNQKTGQEVVFVAEPDSKNLYKFELDTAERKTEFDSISGTYALY
LMVGDATLENPVLWNVADVVLKFLDEETPSTVQSKNLYVPKPEIQHMFREPEKRPPTVLS
NTFTALVLSPFLLLLILWFKLGANISNMSLSPSCVLFHIGHAAMLGLMYVYWTQLNMFQT
LKYLAIIGSLTFLAGNRMLAQKAVKRIAAEQSSRLAKYRSLR
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcgctactccgtttggtcagcattgtggtctccatcctggctctcggagcctgggcg
ctcaacccaacccaccacctgaccgcttcggatgtggacagacttcaggctgtcctggag
cagccgttcacagacctgaagtcagcgtacctctccatcgtcggcctgagcaagttggga
gtgtccgtgcctgactcagatgaggcttgcaatttcattacgtccaacttggattcttcc
agcatcgagtctctgttttatgcagctgaggccagtgaagtgctttcctcttgtgagatc
cacgtatcgaacgagactcgggatttgctcctcgccgctgtaagtgaggactccaccatc
tcgcagatccaccaggctgtgagcgcgctcagctctctgggactccctatggcatcgcaa
gaggtggtcagtgccctgaaagctcgcatcgcaaaggaggacaatgtcatggccatcatt
caggctctgcaggcggcctcccgtctctctcagcaggccgaactcggagatatcctggag
gaaattgaggatctggctgctcggctggatgacctgggaggcgtgtatctgcagttcgag
gaaggtctggaggccactgccctgttcgtgtcttcagcatatgcgctgtctgattacatg
gacgtggagcctccactgaaagaggaccaggtgatccagctggtgaactcgatcttcagt
aagaagtcgtgggactctctgtctgaggcgttcagcgtagccagcgccgccgctgcgctc
tccaacaaccgcttccacaagccggtcatcgttaacgctctgggctctgcagctgtctca
cacagccagcctctgctgcagctccaggtgactgatgttctgtgccagcctctgagttct
gccaacgtactggtggaatcagccacctctgtatcgtccaaggctgtagtcctgagtcag
acccccttcaccctacacgatgacgtttttgagctgaacttcatggccagccagcctgcg
agcggttattaccagttctccgtggccgtcaccggagacagccgtctggtggccaaccaa
attgacctcaaggtaaaagtctccaccaaggtagccatcaacaacatggacctgtctgtg
gtcgacaaggaccagagcatcggtgccaaaaccactcgagtggaatatccaaacaaagcc
aagacctccttcttggctgacagccaccagaacttcgctatgtccttccagctggtggac
gaagccaccggagtggagctcacgcctcatcagactttcgtcaggctgcataaccagaag
acggggcaggaggtggtgtttgtggccgagccagacagcaaaaacctgtacaagtttgag
ctggacacagctgagagaaagaccgagttcgactccatctcaggcacctacgcgctctac
ctgatggtgggagacgccacgctggagaacccagtcttatggaacgtggcggacgttgtt
ctcaagttcctcgatgaagagactccatctacggttcagtcaaagaacctgtatgttccc
aaaccagagattcagcatatgttccgtgagccagagaaaagacctcctactgtcctgtcc
aacaccttcaccgcactcgtcctctctcccttcctgctgctgctcatcctgtggttcaag
ttgggtgccaacatttccaacatgagtctgtcccccagctgtgtgctcttccacattggc
catgctgccatgctcggcctgatgtacgtgtactggactcagctgaacatgttccagact
cttaaatacctggccatcatcggaagcctcacgttcctggccgggaaccgcatgctggcc
cagaaagcagttaaaaggatcgccgctgagcagagtagtaggttggctaagtataggagt
ctgcggtga
DBGET
integrated database retrieval system
