Pangasianodon hypophthalmus (striped catfish): 113538001
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Entry
113538001 CDS
T05759
Symbol
rbm12
Name
(RefSeq) RNA-binding protein 12
KO
K24526
RNA-binding protein 12
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phyp03041
]
113538001 (rbm12)
Spliceosome [BR:
phyp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
113538001 (rbm12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Med3
Motif
Other DBs
NCBI-GeneID:
113538001
NCBI-ProteinID:
XP_026788592
LinkDB
All DBs
Position
Unknown
AA seq
893 aa
AA seq
DB search
MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGDHGEAFIVFATDEDARLGMMRT
GGTIKGSKVSLLLSSKTEMQNMIELSRRRFETGNADGASGNSNRSGPPNVTGGTERGSLP
TTAQGFSNTTSTTATTAVSVNEPVSNKSAPTFASTTIGNMPPNFNNFSSPNLSMGSTMTT
AMSSLSTVPPPIPPLPTMPTLPPMPPMPVPPPVSTLPPVPAVNPLTSVPPVPPMAHMPHL
SALPPFNPGVPPPVGPVAGGLAASGPPLSLGNPNPMFLNPLNPLNPLNLQAHLKSALMNP
DELYIQVQGLPYNTSEIEIGEFFHGLGVDSIRILRDGLGRSSGRALVKFFTPQDSFEALK
RNTGMIGQRYIEISPSSERQWRDTQGSCAEQLKVGSDSEQSRHHRGSATSASPSGRERAR
SRSPHKQEYCVYLKGLPYEAENKQIFEFFKNLDIVEDSIYIAYGPNGRATGEGFVEFRNE
MDYKVALGCHMQYMGSRFIQVHPITKKNMFEKIDAIRKRMQGSQGDHKGSLSEGGKGARI
CAHITNIPYNVSKKDVRLFLDGIQLFEDSLKVLVDGNGNGLGQAVVQFKSEEDAHKAERL
HRQKLNGRDAFVHLVTYEQMKEVERNPPPQSKRGQKAQNNSLAHAHAQAQAQAQAQAQVQ
AQIQAQAQHAFPGMTGEEFNFLRSAVGNLGNGPPFVNPFAAPGNGLAGPPPLPPLGTALG
DVSLPVPPPIVGGHLPGPVLEPPGFRPGGSSAPPGFVGAPESLRSMPSFDNGSSRKSAGQ
NRGGNQSRSAGSQPAFGPSSENPRASTTGGAGNPRPTIVKIQNMPFTVTVDEILDFFYGY
KVLPGSVCLQFSEKGLPTGEAMVAFDSHDEAMSAVMDLNDRPIGARKVKITMG
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtcatccgtttgcagggcctccccattgtggctggcaccatggacattcgc
catttcttctccggtctgacaatcccggatggtggcgtgcatattgtagggggtgaccat
ggtgaagcttttatcgtgttcgcaacagatgaagatgcaaggcttggaatgatgcgcaca
gggggaacaatcaaaggttccaaagtgtcactgttacttagcagcaaaactgagatgcaa
aacatgattgagttgagccgcaggcgttttgaaactggtaatgcagatggggcttcagga
aatagtaacaggtcaggacctcccaatgttactggaggaactgaaaggggtagcctgcca
accactgcacaaggttttagtaataccacttcaactacagcaaccacagctgtctctgtt
aatgaacctgtaagcaacaaaagtgctccaacctttgcctctacaaccataggcaacatg
cctccaaactttaataatttcagcagcccaaatcttagcatggggtccaccatgactacc
gccatgtcctccttaagtactgtacctcctccaataccccccttgcctacgatgccaacc
ttaccacctatgccgcccatgccagtaccaccaccagtgtccacgttacccccagtacca
gctgtaaaccctttaacctcagtgccacctgtccctcccatggctcacatgccacaccta
tctgcactccctccttttaatcctggtgttcccccaccagttggacccgtggctggtggt
cttgctgcctcaggaccacctttgtctcttggaaacccaaatccaatgtttcttaacccc
ctaaaccctctaaatccactcaatctccaggctcatttgaaatcagcactgatgaaccct
gatgagttgtacatacaggttcaaggccttccttacaatacatctgaaattgaaattgga
gaatttttccatggattgggggttgactctattcggatactcagagatggtcttggcagg
agcagtggcagggccttggttaaattttttacaccccaagattcctttgaagctcttaaa
cgaaacactggtatgataggccaaaggtatatagaaatatctccttcttcagaaaggcaa
tggagagatacccagggatcatgtgcagagcagcttaaagtaggtagtgactcggaacag
agtcggcatcatcgtggaagcgctacctctgcttccccttctggtcgagagcgtgctagg
tctcggtcacctcataaacaagagtactgtgtgtatttaaaggggctcccgtatgaagca
gaaaataaacagatatttgaatttttcaaaaacctggacattgttgaagacagcatttac
attgcatatggacccaatggcagggcaacaggagagggttttgttgagtttagaaatgaa
atggactacaaagttgctctgggatgccacatgcagtacatgggaagtagatttatacaa
gtgcaccctattacaaagaaaaatatgtttgaaaagattgatgcaattcgcaaaagaatg
cagggctcccagggggatcataaaggtagcttatcagaggggggaaagggtgctcgaatt
tgtgctcatataacaaatatcccctataatgtgtccaagaaagatgtacgcctgtttttg
gatggaattcaattgtttgaagacagcctcaaagtactagttgatggcaacggaaatggc
cttggccaagctgtggtgcagtttaaatctgaggaggatgcccataaagctgaacgatta
cataggcaaaagttaaatggcagggatgcgtttgtccacttggttacatatgagcagatg
aaggaggttgagagaaaccctcccccacagtcaaagcggggacaaaaggctcaaaacaat
tcccttgcccatgcacatgcccaggcccaggcccaagctcaagctcaggcccaagtgcaa
gcccaaatccaagctcaagcacaacatgctttccctggaatgaccggggaggagttcaat
tttctcagaagtgctgtggggaaccttggtaatggccctccatttgtcaacccatttgct
gccccaggtaatggcttagcaggcccaccacctctgcctccattaggtacagctttgggt
gatgtttcacttcctgttcctcctcctattgttggggggcatttacctgggcctgtcctg
gagccccctggtttccgccctggtggcagcagtgcacctcctggttttgttggagcccca
gagagcttaaggagcatgccgtcatttgataatggatcttcaaggaaaagtgcaggtcaa
aaccgtggtggaaaccaaagtcgttcagcaggttctcaacctgcctttggtccatcctct
gaaaatccaagggcatcaaccactggtggtgcaggcaacccacggccaaccattgtcaag
attcaaaatatgccttttactgtcacggttgatgaaatattagatttcttttatggttat
aaggtgttgcctggctctgtgtgtctgcaatttagtgagaagggactgcctacaggggag
gcaatggttgcatttgattctcatgatgaagcaatgtctgctgttatggacctgaatgat
aggcctattggtgcaagaaaagtaaaaatcactatgggatga
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