Pangasianodon hypophthalmus (striped catfish): 113538104
Help
Entry
113538104 CDS
T05759
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyp03400
]
113538104 (ap5b1)
DNA repair and recombination proteins [BR:
phyp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
113538104 (ap5b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_barrel
AP5B1_C
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
113538104
NCBI-ProteinID:
XP_026788757
LinkDB
All DBs
Position
Unknown
AA seq
923 aa
AA seq
DB search
MTSWDQRISSFLLSPTQFLSCTTSESFLAELLDKLRDDKANDSKKILLLSVLLEHPTVLC
PTTSVGEETAQELVSILNFTPQKSFSLKCHLMLAITNVLICTLCLANRTKVTEDYLNFLF
MLIQDTNDNAGGPTLHSVRATACESLREMENCQPGLLSQKLEALYYFKQQETTVLHQSYC
TLYTQALKNAIQLLTQQKDVDNAKLRSVLAGNEGFAWKSARFGKSMLSISMAQVPQLPTT
LDFKELKSIMSLLLEESYLMTSPSQAALLRGLVEMVAMVPGISPAIFKSQLLRLFGTTEV
ELMHATLFMKGTFTDSLFTAEDEHFLLKRLVGMAQHPLLRTPEKLFYMDCILHFPENRPI
SSSGEECLPVLITPQLTLFLFPTVFNDSTTMLCRLNLLCLVHLEANEEEDGQGLGYLINH
VMALLRIVDNHGSREMVVTSFKAIFIFLLHFNHMENLSEKIVHRLRELYSRNCHLAPNLI
NLTDRIQEHLEDSLWSVRLLKALQLCIVEMPPLQLTLQSLGWHLKILARVAQESQITQRS
TICFLLDILVNSNLCERRSWHVGTAILAVCRNLLQHPTLNQMFIELADLLQHMSRHYEDR
DIQDHARFYYTLLTNLSWEKLAGILAKAPIGGQTKVRSLSAITASEDLGSCLTVLQTESC
VLQLTKIHKNGSQDAVPSTEVLTEKDLYEVYQEQLKTPGFASEVTLRYTLTHANATDPRF
DRIFTICLHFDVNTSHYAKVNDIYVPCLFRDRKPHQVSVTLKPYHPYPTSLQVSAIFTTE
DGQSWHTHLPNVKVSFPEIFLPVPLPLGTSLQRKEDVFDRIWDSISSGEPSTSETSLFCF
KTGSDTLADLITKNFQGYVISQELNVWKVLFFLPPLFHVLLTIREGEDAVQVSIATDNWE
LLPHVNSYLQNITAQCNTTTDDS
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgacctcctgggatcagagaatttcctcttttttattgagtccaactcagtttttgtcc
tgcaccacctctgagagttttttagctgaacttcttgacaaactgagggatgacaaagca
aatgacagtaagaagatactcctgctgtctgtattattggagcatcccacggtcctttgc
ccgaccacgtcagtgggagaggagacagcgcaggagctcgtgtcgattctcaactttact
ccacagaaatccttcagtctaaagtgccacctcatgctggctatcaccaatgttttgata
tgcacattgtgcctggccaaccgaacgaaagtcactgaggactatttgaactttctgttt
atgttgattcaggacacaaacgataacgcgggtggtccgactctccactctgtccgagcc
accgcttgcgagagtcttagggaaatggagaactgccaaccgggccttctgtcacaaaag
ctagaggctctttattattttaagcagcaggaaaccaccgttctgcatcagtcgtactgc
accctctatacacaggctctcaagaacgcaatccagcttttgacccaacaaaaagatgtg
gataatgctaagcttaggagcgtcttagccggaaacgaaggctttgcgtggaaatctgcc
aggtttggaaagtccatgctgtctataagcatggcgcaagttccacagctgccgacgacg
ctggatttcaaagagctgaagtccataatgtccttgctcttggaggagtcctatttgatg
acatctccctcgcaggccgccttgctccgaggacttgtagagatggtggcgatggtacca
ggcatctctccggccatattcaagtctcagttgctcaggcttttcggaacgaccgaggtg
gagctgatgcacgccacactgtttatgaaaggtacgttcactgatagcctcttcactgcc
gaggatgaacatttcttgctcaagcgtcttgtaggaatggcgcaacatcccctactgaga
actcccgagaagctcttttacatggactgcattcttcactttcccgagaacagaccgatc
tctagcagtggagaggagtgcttgcctgtcctcatcacgcctcagcttactctattcctc
ttccctactgtgttcaacgacagcaccacaatgctttgtagactaaaccttctctgcctg
gtacacctcgaggcaaatgaagaagaggatggccaaggtctgggatatttgatcaatcat
gtgatggctctgctcagaattgtagacaatcacggcagcagggaaatggtagtgacatct
ttcaaagcgattttcattttcctcctgcacttcaaccacatggagaacctttccgaaaaa
attgtccaccggttacgtgagctgtattccagaaactgtcaccttgcgccaaatctgatc
aatctcactgatcgaatccaggaacacttagaggattcgctttggtcggtccggttgttg
aaagctcttcaattgtgcattgtggaaatgcctcctttgcaactcacccttcaaagtttg
ggttggcatcttaaaatcttggctcgagtggcacaggagagtcagatcacccagagaagt
accatctgcttccttctcgacatccttgtcaattccaacctttgtgaaaggaggagctgg
cacgtcggcactgccattctggcggtatgccgcaacttgctccagcatccgacgctgaat
cagatgttcattgaactggcggatctcctgcagcacatgtccagacactatgaggacaga
gacattcaagaccacgctcggttctactacacccttcttaccaacttgtcctgggaaaaa
cttgctggcatcctcgccaaagcccccataggaggacagacaaaagtccgatcgttgtca
gccatcactgcaagtgaagaccttggcagttgtttgacagttcttcagactgagagttgt
gtccttcagcttacaaagattcacaaaaatggctctcaggatgcagttccaagtacagaa
gtcctgactgagaaggacttgtatgaggtttaccaagagcaactcaaaaccccaggcttt
gcctcagaggtcactttgaggtacaccctgactcacgcaaatgctacggatcctagattc
gatcgaatcttcaccatatgcctgcattttgacgtcaacacgtcgcactatgcaaaagtg
aacgacatttatgtaccgtgccttttcagagacaggaagccgcatcaagtcagcgtgacg
ctgaagccgtatcacccgtacccaacgagtttacaagtgagcgccattttcactacggaa
gacggccagtcttggcacactcatctccccaatgttaaagtgtcgttccctgagatattt
ctgcccgtgcctttaccgctaggtacatcacttcagcgcaaagaggatgtgtttgatcgg
atttgggactctatatcctcaggggaacctagcacttcagagacgagcctgttttgtttt
aagactggaagtgacactctagcggatctgattacgaagaatttccagggctatgtgatt
tcacaagaactaaatgtgtggaaggtcctatttttccttccacctctttttcacgtttta
ttgacgatcagagagggtgaggacgctgttcaagtcagcattgcaacagacaactgggaa
ctgctgcctcatgtcaactcctacttacaaaacataacagcacagtgtaacacaacaact
gatgacagctga
DBGET
integrated database retrieval system
