Pangasianodon hypophthalmus (striped catfish): 113538140
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Entry
113538140 CDS
T05759
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi-like
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04080
Neuroactive ligand-receptor interaction
phyp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113538140
04082 Neuroactive ligand signaling
113538140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113538140
Ion channels [BR:
phyp04040
]
Ligand-gated channels
GABA-A
113538140
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
113538140
NCBI-ProteinID:
XP_026788814
LinkDB
All DBs
Position
Unknown
AA seq
456 aa
AA seq
DB search
MIPSCFTLFAFILFSSILEEPLLSAEVKEGEILPPTIQKLMKGYNKYLRPFFDNGPVTVG
MSLDIASIDTISEINMDYTATIFLRQRWTDERLVFEGNKSLSLDGRLVELLWVPDTFIVD
SKKSFLHDITVENRLIRIFPNGTVLYALRITTTVACNMDLTKYPMDKQTCTLQLESWGYN
VNDVMFYWARGNDSVSGLDTLRLAQYTVEDHYTSASEAVYETGNYPKLIFHFELKRSILY
FILETYVPSSLLVVLSWVSFWISQSSVPARICIGVTTVLTMTTLMMGARTSLPNANCFIK
AIDVYLGICFSFIFGALIEYAVAHFCTLHHPDCNSALTHMQDCEEEMNGIVTTIASDSRR
AKRRKDSPTPASTSTPSGEPDLMAQTPSHPEPRTPEALEDPLNRCIRSLSLIRQMLRSVN
CCHVENPHYIDNYSRVTFPLSFIVVNLLYWTYYLYF
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgatcccttcctgtttcactctgtttgccttcatcctcttcagcagcatcctggaggag
ccactgctgagtgctgaggtgaaggaaggagagattctgcctcctaccattcagaagctg
atgaaaggatacaacaagtacctgaggcctttctttgacaatggccctgtcactgtggga
atgagtttggacattgccagcattgacacaatatcagagatcaacatggactacactgcc
accatcttcctgcggcagcgctggacagatgagaggctggtgtttgaaggcaataagagc
ttgagtctggatgggcgtctggtggagctgctctgggttcctgataccttcattgtggat
tccaagaagtctttcctgcatgatatcacagtggagaaccggctgatccgaatcttcccc
aacgggactgtgctttacgctctccggatcaccaccactgtggcctgcaacatggacctg
actaaataccccatggataaacagacatgcaccctacaactggaaagctggggttataat
gtcaatgatgtgatgttttactgggcaagaggcaatgattcagtcagtgggttggacact
ctgcgtctggcccagtacacagtagaggatcattacacttctgcctcagaggctgtgtat
gagacaggtaattatcctaaactcatattccactttgagctgaagagaagcatcctctac
ttcatcctggaaacctacgtgccctccagtctgctagtcgtgctctcctgggtgtccttc
tggatcagccagtcatctgtgcctgctcgcatatgtataggtgttacaacagtgttaacg
atgaccactctgatgatgggtgcaaggacgtctctacccaacgctaactgcttcatcaag
gcaatagacgtgtatttgggaatttgtttcagtttcatctttggagctttgatagagtat
gctgttgctcacttctgcacactccaccacccagattgcaacagtgcacttacgcacatg
caggactgtgaagaggagatgaacggcattgtcaccaccattgccagtgattccaggcga
gcaaaacgccgtaaggactctccaacccctgcgtccacatcgacccctagcggagagcct
gatctcatggcccaaaccccttctcacccagagcctaggaccccggaggccctggaggat
cctcttaaccgctgcatcagaagcctgtccctcatacgacagatgctccgctctgtgaac
tgctgtcacgtggagaatccacactacatagacaactactctcgtgtaacatttccccta
tcctttatcgtagtcaacctgctctactggacttactatctgtacttttaa
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