Pangasianodon hypophthalmus (striped catfish): 113538184
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Entry
113538184 CDS
T05759
Symbol
cacna1i
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04010
MAPK signaling pathway
phyp04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113538184 (cacna1i)
04020 Calcium signaling pathway
113538184 (cacna1i)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113538184 (cacna1i)
Ion channels [BR:
phyp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
113538184 (cacna1i)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
113538184
NCBI-ProteinID:
XP_026788863
LinkDB
All DBs
Position
Unknown
AA seq
2112 aa
AA seq
DB search
MMVILLNCVTLGMYQPCENIDCSSQRCQILQAFDAIIYIFFAVEMVVKMVALGIFGRRCY
LGDTWNRLDFFIVMAGVVEYSLDLQNINFTAIRTVRVLRPLKAINRVPSMRILVNLLLDT
LPMLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCYPDKNFTLSTGMALPAPYYSPDEEDE
KPFICSLPQDNGIMSCNDVPARREGGRECCLDVEDALHLQTLGLAADPLLNASIGAVPGL
CVNWNRYYTQCRTGYSNPHKGAINFDNIGYAWIVIFQVITLEGWVEIMYYVMDAHSFYNF
IYFILLIIVGSFFMINLCLVVIATQFSETKQREHQLMQEQRARCLSSSTLASLAEPGDCY
EELFQLTCHMLRKARRRSTAFFRALRPRPCQATPTQSQTNVNGGERSQRQHQGSHCPHHT
KPDHDPPEGSDVLTSPPVSEECPHCVALSLRDGAGPAGMAANQEAEEGALEDTDGQGGQS
GEQKEERVCKGKCKELWMEMRIKLWGIVESKYFNRGIMIAILINTISMGIEHHEQPEELT
NVLEICNIVFTSMFALEMILKLTAFGCFNYLHNPYNIFDGIIVIISVCEIVGQSDGGLSV
LRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFS
LKTDAGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPLAALYFVALMTFG
NYVLFNLLVAILVEGFQAEGDANRSYSDDDGSSSNYDGSERHKDSLQLSDPKLCALTPNG
HLEMNPIGGGRINLEEESRKSSVTSLGKSSLEQRSFSLRHGRSSLYRHWGRPHPQSAWSR
RSSWNSVGRATRGLAVGGSLRVRGPHSHPAERESLLSPRPQLSHHPPLLSRRYPLRRDRR
ALSLELPEQLQLPGPPLQHPLLTRKKSVCGEQHHDCNGKAPMRQRALLSEVYPQLNARKD
KLHLDEETDYSLCFRIQKMIEVYRPDWCETREDWSVYLFSPENKFRLTCQKIIAHKLFDY
VVLAFIFLNCITVALERPKIHQGSLERVFLTISNYIFTAIFVAEMTVKVVSMGLYLGDRA
YLRSSWNILDGFLVFVSLIDIVVSMAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVV
ETLITSLKPIGNIVLICCAFFIIFGILGVQLFKGKFYYCVGLDVKNITNKSDCLLAKYKW
VHHKYNFDNLGQALMSLFVLASKDGWVNIMYHGLDAVGIDQQPVTNNNPWMLLYFISFLL
IVSFFVLNMFVGVVVENFHKCRQHQEVEEAKRREEKRLRRMEKKRRKAQKLPYYAGYGHV
RLMIHSLCTSHYLDLFITLIICINVVTMSLEHYDQPKSLETALKYCNYFFSSTFVVEATL
KLIAFGFRRFFKDRWNQLDLAIVLLSVMGITLEEIEINASLPINPTIIRIMRVLRIARVL
KLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGELVCNADYPCEGMS
RHATFENFGMAFLTLFQVSTGDNWNGIMKDTLRECPPGDTYSCNGSLQFISPMYFVSFVL
TAQFVLINVVVAVLMKHLDDSNKEAQEEAEMDAEIELELAQGGLCCLGGLAAAAGPGIGV
GTGERPSLECGSRQAAMVGAHVHASQSGYTPPSGGHESHNHRKLYSPAQENLWLDSVSLL
IKDSLEGEMQMIDNLSGSVFHHYSSPAVCRGCRCQPTEIRLAEVEQASLMSEQLSDKSSS
PALPDDLSLDDHSVYQLVVRDIKEERGSSTSHSLEELQATPAECSGSHPKSRAFSMGSES
GDTLPNSGLQKQNESACHQHVPSHSPADGERGGSSSRRDRRTPSPLFHLPAEFFHPATAV
PQGNLASGMARTGRAGTRLTSPASWASLRSPGANSRVMGSQPPSHSESSLAMGSSEVSLQ
TMLEEGINFSVPPHRDLSLPQPLLCPVPDETLPSSDLSQRLHPDQTSFTLQATRGRQRSQ
SSCDGSPSPSCNRLNSIEPSDEDTGIGGGSSQAFNSEHLSETISSLSLSSLLTPGSVAPP
LAKKCNSTGSLEQGNVLARNKNGRHLHSTDQHQYLSNPWTEEGDGGDGEKGLAGLGVKSS
SQTMDTSSRKNR
NT seq
6339 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgatcctgttgaactgtgtgaccctgggaatgtaccaaccgtgtgagaacatt
gactgctcctcccaacgctgtcagatactgcaggcattcgatgcaattatttatatcttc
tttgctgtggagatggtggtgaagatggtggctctcggcatctttggccgccgctgttac
cttggcgacacgtggaacagactggacttcttcatcgtcatggcaggggttgtggaatac
tctctggatcttcagaacatcaattttacggctatcaggacagtcagggttctgcgacct
ctcaaagccatcaacagagtcccaagtatgaggatcttggtaaacctgctcctggacacc
ctacccatgctgggcaatgtgctcctgctctgcttcttcgtcttcttcatcttcggcatc
attggcgtgcaactgtgggcggggcttctgcgcaaccgctgctatcctgataagaatttc
accctatcaacgggaatggccctgcctgctccctactactcccctgatgaggaagatgag
aagcctttcatttgctcgctgcctcaggataatggaatcatgtcatgcaacgatgtcccg
gcacggcgtgagggaggccgtgagtgttgtttggatgtggaggatgctcttcacctacag
actctgggcctggcagctgatcccctcctcaatgccagcataggtgctgtgccaggcctg
tgtgtcaactggaaccgctattacacccagtgccgcacaggctactccaacccccacaag
ggcgccattaactttgacaacattggctatgcatggattgtgatctttcaggtcataact
ctggagggctgggtggagatcatgtattacgtgatggatgcacactccttctacaacttc
atttacttcatcttgctaatcatagttggctctttcttcatgattaatctgtgtctggtg
gtcatagccactcagttctcagagacaaaacagcgtgaacaccagctgatgcaggagcag
cgtgcccgctgtctgtcctccagcacattggcatcgctggcagagccaggggattgttat
gaggagctcttccagctcacctgtcacatgctgcgtaaagcccgtcgccgctccactgct
ttcttcagggcactgagaccacgcccatgccaggccacacctacccagtcacaaaccaat
gtcaatggtggagaaaggagtcaaaggcaacatcaggggtcccactgtccccatcacacg
aagcctgaccatgatcctcctgaaggttctgatgttctaacttcaccacccgtctctgag
gaatgtcctcactgtgtggccctgtctctcagagatggtgcaggacctgcagggatggcg
gccaatcaggaggcagaggagggtgctctggaggacacagatgggcagggtggccaatca
ggagagcagaaagaagagagggtgtgtaaagggaaatgtaaagagctgtggatggagatg
aggattaaactgtggggaattgtagagagcaaatacttcaaccgaggcatcatgattgcc
attctcatcaataccatcagcatgggcatcgaacatcatgagcagccggaggagctgact
aatgttctggagatctgcaacatcgtcttcaccagcatgtttgccctggagatgatcctg
aagctgactgccttcggttgcttcaactacctgcacaacccgtacaacatttttgacggc
atcatcgttatcatcagcgtgtgtgagattgttggacagtccgacggtggtctgagtgtg
ttgaggacgttcaggctgctccgcgtgttaaagctggtgcgcttcatgcctgctctgcgc
cggcagctcgtcgttctgatgaaaaccatggacaacgtggccacattctgcatgctcctc
atgctcttcatcttcatcttcagtatcttgggaatgcacatattcggctgtaaattcagt
ctgaagacagatgctggagacacggtccctgacaggaaaaactttgactctctactgtgg
gccatagtgacggtttttcagatcctgactcaggaggactggaacgtggtgttgtataat
ggcatggcctccacctctcctctggcagctctctatttcgtggctctcatgacgtttgga
aactatgtgctttttaacctacttgttgccattctggtagagggttttcaagcagagggt
gatgctaatcgttcatattcagatgatgatgggtcgtcctccaactatgatgggagtgag
agacacaaggactcgctccagctctctgatcctaaactttgtgctttgacccctaatggg
caccttgagatgaaccccataggaggaggaaggataaatttggaagaggaatctcgtaag
agcagtgtcaccagtctgggcaagagcagcctggagcaacgatctttttcactgcgtcat
ggccgtagttccttgtaccgccactgggggcgcccccacccccagtcagcatggagccgc
cgctctagctggaacagtgtgggtcgtgctactcgaggtctggcagtaggggggagtctg
cgagtccgaggtccccactcccacccggctgagagggagtccctcctctctccacgcccc
caactctcacatcacccgcctctcctttctcgtcgttatccccttcgccgtgatcggcgt
gccctctcgctcgagctccccgagcagctccagctccctggacctccactgcagcacccc
cttctgaccaggaagaaaagtgtgtgtggggagcagcaccatgactgtaatgggaaagca
ccaatgcgccagagagcactgctcagcgaggtttatccccaactcaatgctcggaaggac
aaactacaccttgatgaggagacagactacagcctatgttttcggatccagaagatgatt
gaggtatatcggccagactggtgcgagacgagggaagactggtctgtctacttgttttcc
cctgagaacaagttcaggttaacttgccagaagatcattgctcataaactgtttgactat
gtagtgttggccttcatcttcctcaactgcatcacagtggctcttgaaagacccaagatt
caccagggcagcctggagcgagtctttctcaccatctctaactatatcttcactgccatc
ttcgtagccgagatgacggtcaaggtggtttcgatggggttgtatctgggagatcgtgcg
tacctgcgcagcagttggaacatactggatggtttccttgtctttgtgtctctgattgac
attgtcgtgtcgatggcgggaggggccaagatcctgggtgtgctacgtgtcctacggcta
ctcagaaccctgcgacccctcagggtgatcagccgggctcctggactgaagctggtggtg
gagactctcatcacgtctctcaagcccataggaaacattgtgctcatctgctgtgcgttc
ttcatcatctttggcatcctcggcgtgcagctcttcaaagggaagttctattattgtgtt
ggcctggatgtcaagaatattaccaataagtctgattgtctgttggctaaatacaaatgg
gttcatcacaagtataacttcgacaacctggggcaggctctgatgtccctgtttgttttg
gcctctaaagatggctgggtcaatataatgtaccacggactcgatgcagtgggaatagac
caacagccggtgaccaacaacaacccgtggatgctgctgtacttcatttcgttcctcctc
atcgtcagtttcttcgtgctgaacatgttcgtcggcgtggtggtggagaactttcacaag
tgccggcagcaccaggaggtcgaggaggccaaaaggagggaggaaaagaggctcaggcga
atggagaagaagagacggaaggctcagaagttgccgtactatgccgggtatggccacgtc
cgcttgatgatccactcgttatgcaccagccactacctggacctcttcatcaccctcatc
atttgcatcaatgtcgtcaccatgtcgctggagcactacgaccaaccaaagtctctcgaa
accgctctgaagtactgtaattatttcttcagctccacctttgtggtcgaggccacactg
aagctcatcgccttcggctttcgccgctttttcaaagacaggtggaatcaactagacctg
gctattgtgcttttatctgtgatgggcatcactctggaggagatcgagattaatgcctcg
cttcctatcaaccccaccattattcggatcatgcgggtgttacggatcgcccgtgtgctg
aaactgttgaagatggccactgggatgcgtgctttgctagacacagtagttcaggcttta
cctcaggtggggaatctggggctgctgtttatgttgctgttcttcatctatgctgctctg
ggtgtagagctatttggagaactggtgtgcaatgcagattacccatgtgaggggatgagt
cggcacgccacctttgagaacttcggcatggccttcctgacactcttccaggtctcaact
ggtgacaactggaatgggatcatgaaggacactttacgcgagtgcccaccaggcgatacc
tactcctgcaatggcagtctgcagttcatctcccccatgtactttgtgagttttgtgctg
acggcccagtttgtactcatcaacgtggtagttgccgtgctaatgaagcacctggacgac
tcaaacaaagaggcacaggaagaggcggagatggatgccgaaatcgagctggagctagca
cagggagggctctgctgcctgggtggactggcagctgctgctgggcctggcatcggggtg
ggaactggagagaggccaagtcttgagtgtggaagcagacaggcagctatggtgggggct
catgtgcacgccagccaaagcgggtatacacctccaagtggagggcatgaatcacacaac
cacaggaagctctactcacctgcacaggagaacctgtggctggacagtgtctctctgctg
attaaggactctctggagggagagatgcagatgattgataacctgtcaggatctgtgttt
catcactactcgtcccctgcggtgtgcagaggttgcaggtgccagcctacagagatccga
ttggctgaggtggagcaggcctctctgatgtcagagcagctctcggacaagtcgtcatct
ccagcacttcctgatgacctcagtcttgatgaccacagtgtgtaccagctagttgtcagg
gacatcaaggaggagagagggagcagtacatctcatagcttagaagagcttcaggccaca
ccagcggaatgcagcgggtctcatcccaagagtcgagctttcagcatggggagtgagagc
ggggacacacttcctaattcaggccttcagaagcagaatgaatcagcatgtcatcaacat
gtgccatctcatagtccagcagatggtgaacgaggaggcagtagcagcagaagggacagg
aggacgccctctcctctctttcatctccctgcagagttcttccacccagccacagctgtg
ccacaaggaaacctagcctcgggtatggcgcggacagggcgagcaggcaccaggcttact
tcgccagcctcatgggcatcacttcggtcacccggagccaacagcagggtcatgggctca
cagccaccatctcacagtgagtcatcattagccatgggaagctccgaagtcagcctgcag
accatgctggaggaaggcatcaacttcagcgtacctcctcatagagacctgtctttacct
cagcctctgctttgccctgtacccgacgaaaccctcccttcctcggatctcagccagaga
ttgcaccctgaccaaaccagcttcaccctccaggccaccagggggcgccagaggagtcag
agcagctgtgatggcagccccagccccagctgcaacaggctgaactccatagaaccttca
gacgaggacacagggatcgggggaggatcgagtcaagcatttaacagcgaacatttatca
gagactatcagcagcctttccctaagctcgctgctcacgcctggctcagtggcgccacca
ctggccaaaaagtgcaacagcaccgggagcttagaacaagggaatgtgttggcgcgaaat
aaaaatggacggcaccttcatagcacagaccaacatcagtacctttcaaacccgtggaca
gaagagggagatggaggggatggggagaaagggcttgcaggtttgggggtcaaaagctcc
agtcaaacaatggacaccagctctcggaagaacagatga
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integrated database retrieval system
