Pangasianodon hypophthalmus (striped catfish): 113538254
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Entry
113538254 CDS
T05759
Name
(RefSeq) desmin-like
KO
K07610
desmin
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113538254
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113538254
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
113538254
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
DUF7491
Mis14
DUF4200
TolA_bind_tri
CCDC92
KH_PARP14_8
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
113538254
NCBI-ProteinID:
XP_026788975
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MSRASYASSQSSSYRRAFGGPGFTTTPITRSSMLGRGSGGSHVSSRVYEVTKTASSSSPG
YTSYRASSYGIPALSAGISRSYAAGLGETLDFSLADALNQEFLQTRTNEKAELQHLNDRF
ASYIEKVRFLEQQNQALTVEVERLRGREPTRIADLYEEEMRELRRQIEVVTNQRSRVEVE
RDNLADDLQKLKLRLQEEIAQREEAENNLAAFRADVDAATLARLDLERRIETLQEEIAFL
KKIHEEEIRELQAQMQETQVQIQMDMSKPDLTGALRDIRSQYEAIAAKNIAEAEDWYKSK
VSDLNQAVSKNNEALKQAKLETMEYRHQIQSYTCEIDSLKGTNESLMRQMQDMEDRHGRE
AAGFQDTISRLEAEIANMKDEMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRITLP
MQTYSKISFRETSPEHQQRAAEMHSKKTVLIKTIETRDGEVLSESTQHQEDIM
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgcctcttacgcctcctcccagtcctcctcataccgccgtgccttcggtggg
cccggcttcaccacaacccccattacccgctcctctatgcttggccgtggctccgggggc
tcacatgtcagctcacgggtctacgaggtcaccaagacagcaagttcatcatcaccaggc
tataccagctaccgcgcgtcttcctatggcatccctgctctttcagcaggcatctcccgc
tcctatgccgccggcttgggtgagacactggacttcagccttgccgatgccctcaaccag
gagttcctgcagacgcgcaccaacgagaaggctgagctgcagcacctgaacgaccgcttc
gccagctacatcgagaaggtgcgcttcctcgagcagcagaaccaggctctgacggtggaa
gtggagcgactgcggggccgagagccaacgcgcattgctgacctctatgaggaagagatg
agggagctgaggcgccagatagaggtcgtgaccaatcagaggtcccgagttgaagtggag
agagacaacctggctgatgacttgcagaaactcaaactcaggcttcaggaggagattgca
cagagagaggaggccgagaacaaccttgcagcattcagagctgatgtggatgcagccacc
cttgcccgtttggacctggagagacgcatcgaaactctgcaagaggaaatcgccttcctc
aagaagatccacgaggaggaaatccgtgagctgcaggctcagatgcaagagactcaggtg
cagatccagatggacatgtccaagcctgatctgaccggtgctctgagagacattcgttct
cagtacgaggccatcgccgccaagaacatcgccgaggctgaagactggtacaagtccaag
gtgtcagatctgaaccaagcagtatccaagaacaacgaagccctgaagcaggccaagctg
gagaccatggagtaccgacaccagattcagtcctacacctgtgagattgactcactgaag
ggcacgaacgagtctctgatgaggcagatgcaagacatggaggaccgacatggacgtgag
gctgctggcttccaggacacaatttctcgactggaggctgagatcgctaacatgaaggat
gagatggcacgacacctgcgcgagtaccaggacctgctcaacgtcaagatggccctcgat
gtggagatcgccacctacaggaagctgctggagggagaagagagcaggattacactgccc
atgcagacctactccaagattagctttagagagaccagcccagagcaccaacaacgtgcc
gctgaaatgcactcaaagaaaacagtgctcatcaagacgattgagacccgtgatggcgag
gtgctgagtgagtctacacagcaccaggaggacatcatgtag
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integrated database retrieval system
