KEGG   Pangasianodon hypophthalmus (striped catfish): 113538416
Entry
113538416         CDS       T05759                                 
Symbol
cfap43
Name
(RefSeq) cilia- and flagella-associated protein 43 isoform X1
  KO
K24223  cilia- and flagella-associated protein 43
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:phyp03037]
    113538416 (cfap43)
Cilium and associated proteins [BR:phyp03037]
 Motile cilia and associated proteins
  Tether/Tether head (T/TH) complex
   113538416 (cfap43)
SSDB
Motif
Pfam: CC_Cfap43 Beta-prop_THOC3 Beta-prop_EML_2 Beta-prop_WDR5 Beta-prop_WDR36-Utp21_1st WD40_CDC20-Fz Beta-prop_WDR3_1st WD40_WDHD1_1st WD40 WD40_Prp19 Beta-prop_WDR3_2nd Beta-prop_ACSF4 Beta-prop_EML WDR55 Beta-prop_VPS8 CFAP43_N Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_HPS5 DUF7590 WDR90_beta-prop_4th Beta-prop_WDR75_1st DUF5423
Other DBs
NCBI-GeneID: 113538416
NCBI-ProteinID: XP_026789277
LinkDB
Position
Unknown
AA seq 1658 aa
MDVSGSLEVRWVQGFTSSKVAFLDKKTACYPCGNYITFLNVETKTRKVLQSPGHGIGVFT
ANGLCKTLAFSEQKRLPSIFVYGYPELSLRCELKGTAKLAYTALALSDTAPYLASCSSLP
DYTITVWNLERGISICNSRMEEEDAITLLFNPMSWQQICAVNPKCLTVWNIERSNDFHIM
KPSVIDLPAIDGSVVEQEVDTSYVPTGKLTYSGPQMPTSAIAGLIGDRADKISALNSLRV
KPRLCPSAICWSVSSDLYVGTKEGFLLLVNTESLLVSILHNPHIKQSPSDPDASQVIQEG
SFQSLALHSKGMFATGPDGVLQTLQIKGNQVKVVETLALVEPVSSLCFSPDYEALLLSST
TGRIYKYNPGLKNEVVKVLDVLCGDFIAAAPIYTEKNLCVSVRESGELQLWSLEDGDCIA
SISLKTKVTCLACCPIAQYVAVGAVTGHVLFVDLTRAQKPRLVHTVHLYHVPVEHLVFDQ
GANFLITGAFHSHIFLLDARPSKAFEIIGYTDSMGATVSLSTQYQKESKKVDVLVLCNSG
KRNRKAKEHKEGNLFMLLSVSTQQISDTANCVDPHGRLREQVIQTCVYEIPHSLSSCVLG
TKNIFGYCHQKKVLQRFQLPQNVDKLSSKQKIIRLRPEKEVEGHPLGPALLRLSPHQSWL
ASVGRDGLLCIHDITTLEKCVQKQCHSWWLGGIRSVSFTPDSQTLITTGFRDGSLVCSRL
SLKMAAATQHDLSMVASFEDKISQENPILSDMADWEPPSQAPVEVSNNDQETTDITDKSY
NSLPSTTPFNSTWLDNKLNTVLEEESQQFSETKRSLKKSVEELRDTIQAMMQENEKLPDM
EKLEQLEFNLDMEEQQRLQAEGKQEVTKVRKEIEHENLAKCYLHDILKKKYWDSMNVKGK
AIKAFHSGYEVDNFPMKERTAKELEELYRVEAIRKIEQADTSLQQDILENNKAPLERDED
EEDKGHEVESSALTGSLSAQYGGSNPHLYSQFSLRTRDQKINQITLIQDVIYKVKTAFNT
AFEAVYKQKEQEINRIREKNKRITEIMSKLELQETLWEPTLTDNERPERALTVSDSEIKV
EIYLTPEQRQREEEQRKEEEQRRLAAKVDNIRERALDDMMGGVLEVKKEDILSMEVPPPE
FIDKPELQWTEDERRSYKEYERKIKELSEEQEKYRKTLEAEMKKLQASLKDATQAFDETL
SKLFERKVKLEMIVYQEELKITNLFHSLLIEEEMLNREEQLIYRLEKAQTVKNQIGKTLN
NHREDVEAFREIYDNTVAEDKLLESGFRKEFFDVPGHIVDQLYKLYKRRPRIQIMRTQTD
KIGSFKESPMLSRAAAEGLSQMMKAMEELDATQNMPEGLDPAVWERFCLARRTKVESEQK
VKMKALTLAEMQTFLQKRTAEEENAQMEIKNLVDNLNCLREERSRFCLNVMVQILVKQGQ
VEVEAGDFTADYSDALLLHRSVVEDLNNTIRALGEQKITSMVECKDFHKGIIQQEWEHKR
MSRQIEDLKNKARDIQMLHVSQELQEYLTETDHDNRMSKKVSTLEKTIMLQEKTYMKNVE
SCKKLIKELNRQAEVKKENNAALDLQLTNMQVTVAERRNIYETTAMEENQEHEVKQRYQN
ILQRKNLVDLAKAQDMDIAILSAELECMRMKTFPALSQ
NT seq 4977 nt   +upstreamnt  +downstreamnt
atggatgtttcagggagtttggaagtgaggtgggtgcaggggttcaccagcagcaaagtt
gcatttttggacaaaaaaacagcctgttacccctgtggaaattacatcaccttcctcaat
gtggagacaaaaacaagaaaagtgcttcagagccctggtcatggcatcggggtcttcaca
gcaaatggactttgtaaaactctcgctttttctgagcagaaacgtcttccatccattttt
gtgtatggataccctgagcttagcctgagatgtgagcttaaaggcacagctaaactggcc
tacacagccctcgcactgagtgacactgctccgtatttagccagctgttcatctttacct
gactacaccatcacagtgtggaacttggaaagggggatttcaatttgtaacagtcgaatg
gaggaagaggatgccataaccctacttttcaatccaatgagctggcagcaaatttgtgct
gtgaatccaaaatgtctaacagtgtggaatattgagagaagtaacgacttccatattatg
aagcccagtgttattgatctccctgccattgacggctctgtagttgagcaggaggtcgac
acttcttatgtccccactgggaagctgacatactctggccctcagatgcccacttcagct
attgcagggctgatcggtgacagagcagataaaatttcggcactgaattcacttcgagtg
aaacctcgactctgcccaagtgccatctgctggtcagtgtcctcagatctatatgttggg
actaaagaaggtttcctgctgctagtaaacactgaaagtctccttgtatctattctgcac
aaccctcatattaagcaaagcccctcagatcccgatgcgagccaggtgattcaggaaggc
agttttcagagcttggcactacacagtaaaggaatgtttgctacaggacctgatggtgtt
ttgcaaaccctccagattaaagggaaccaagtgaaagtggtggaaactttagctttagtg
gaaccagtctcaagtttgtgcttttcacctgactatgaagcattgctgctgtcctcaacc
actggacgcatttacaagtacaatccggggcttaaaaatgaagtcgtcaaagttctggat
gtattgtgtggagactttatcgctgctgctccaatatacactgaaaagaacctctgtgtg
tcagtcagagagtctggggagctgcagctgtggtcactggaggatggagattgcattgca
tccatctctctaaagacaaaagtgacctgcttggcatgttgcccaatagcacagtacgta
gctgtgggagccgtaacaggccatgtcctgtttgtggatctgaccagagcacaaaaacct
cgactggttcacactgtccatctgtaccatgtgcctgtagagcatttagttttcgaccaa
ggggcaaatttcttgattacaggagcattccattcacacatatttttgctggatgcaaga
ccatctaaagcatttgagattattggatacactgactctatgggtgccaccgtgagtctg
tcaacccagtaccagaaagagagcaagaaggtggatgtgctggtgctctgtaatagtggg
aagaggaacaggaaggctaaggaacataaggaagggaatctgttcatgttgctgtcagtg
tctacacagcagatctcagatacagcaaattgtgtggacccccatggccgcctgcgagaa
caagttattcaaacctgtgtatatgagatcccacactctctttcctcatgtgttctgggt
accaaaaacatctttggttattgtcaccagaagaaagttctgcagagattccagctacca
cagaatgtggataaattgtccagcaaacagaaaataattagattgaggccagagaaggag
gtagagggtcatcctctcggccctgcattactacgtctctcacctcatcagagctggctg
gcgtctgtcggcagagacgggctgctttgcatccatgacatcaccactctggagaagtgt
gtgcaaaagcagtgccactcttggtggttgggaggaattcgctctgtgtctttcacccct
gacagtcagactcttatcactaccggtttccgagatggctcactggtctgcagcaggctc
agtttaaagatggctgcagctacccagcatgacctgtctatggtggcctcctttgaagat
aaaatttcccaagagaaccccatcctcagtgacatggctgactgggaaccgccatcacag
gcaccagtagaggtcagtaacaatgaccaagaaacaactgacataacagacaagagttat
aacagtctgccttctacaactccattcaattccacatggctggataataaactaaataca
gtactcgaagaggagagccagcagttttcagagaccaagaggagtcttaagaagagtgta
gaggaacttcgggacacaatccaggctatgatgcaggagaatgagaagctgccagacatg
gagaagctggagcagctggaatttaacctggacatggaggagcagcagagactacaagct
gagggaaagcaggaagtcaccaaggtgagaaaggagattgagcatgagaacctggcaaaa
tgttatctgcacgatattctcaagaaaaagtactgggactccatgaacgtgaaagggaag
gccattaaggccttccactcagggtatgaagtggataactttcccatgaaggaacgcaca
gcaaaggaactagaagagctttacagggtagaagccatccgaaagatcgaacaggctgac
actagtttgcagcaggacattttggagaacaacaaggcaccattagagagagatgaagat
gaggaggataaagggcatgaggtggagagctcagctttaacaggtagtctgagtgctcag
tatggaggttccaaccctcacttatacagccagttcagtctgcgtacaagagaccaaaag
atcaaccagatcaccctgatacaggacgttatttacaaagtgaaaacagcttttaacaca
gcgtttgaggctgtgtacaagcagaaggagcaagagatcaaccgcataagagagaagaac
aagcgcattacagagattatgagtaagttggagctgcaggagaccctgtgggagcccact
ctgaccgacaacgagagaccagagagagctctcactgtcagtgactctgagatcaaggtt
gagatatacctgacacctgagcagagacagagagaggaggagcagagaaaggaagaggag
cagaggaggcttgcagcaaaggtggacaatatcagagagcgagctttggatgatatgatg
ggtggagttcttgaggtcaaaaaagaggacatcctgagtatggaagtaccaccaccagag
tttattgataagcctgagctccagtggacagaggacgaaagaagaagctacaaagagtat
gagagaaaaataaaggagctcagtgaagaacaggagaaatatagaaagaccttggaggca
gagatgaagaaactgcaggcgtcccttaaagatgccacccaggcttttgatgaaacactg
agcaagctgtttgaaaggaaagtgaaattagaaatgattgtataccaggaagagctaaag
atcaccaatctgttccattccttactaattgaggaagagatgctgaacagagaggaacag
ctgatctacagactggagaaggcacaaactgttaagaatcaaattgggaaaactttgaat
aatcacagagaggatgtagaggcctttcgggagatatacgataatacagtagcagaagat
aaacttcttgaaagtggatttcgcaaagagttttttgatgtccctggacacattgttgac
cagctgtacaagctctacaagcgcagacccaggatccagattatgaggacacagacagac
aagataggctcgtttaaggaatctcctatgctgagtcgagcagcagcagaaggactctca
cagatgatgaaggctatggaggagttagatgcaacacagaacatgccagagggtctggac
ccagccgtgtgggagagattctgtctggccaggaggaccaaagtagagagtgagcagaag
gtaaaaatgaaggcactgactttagcggagatgcagacttttctgcagaagagaacagca
gaggaggagaacgcacaaatggaaatcaagaaccttgtcgataatcttaattgcctgcgt
gaagagaggtcgaggttctgcctcaacgttatggtgcagattctggtaaaacagggccag
gttgaggtggaggctggagactttactgcagactactcagacgctttgttgctccaccgc
agtgttgtggaggacctgaacaacaccatcagggctttaggagagcagaagatcaccagc
atggtggagtgcaaagattttcataaaggaataattcagcaggaatgggaacataagagg
atgagtaggcagatagaagatctcaaaaacaaagccagagacattcagatgctgcatgtg
tctcaggaactccaagagtacctgacggagacagaccatgacaacagaatgtccaagaag
gtatctactctggagaagacaataatgttacaagagaagacttatatgaagaatgtagag
agctgtaagaagctgataaaggagctgaacagacaagctgaggtgaagaaagaaaataat
gcagctttagatctgcagctgaccaacatgcaagtgactgttgcagaaagaagaaacatc
tatgaaaccacagcaatggaggagaatcaagagcatgaagttaagcaacgctatcaaaac
atcctgcagaggaagaaccttgtggacttggccaaagcacaggatatggacatagccatt
ctgagcgctgagttggaatgcatgcggatgaaaacatttcctgctctttctcaatag

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