Pangasianodon hypophthalmus (striped catfish): 113538486
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Entry
113538486 CDS
T05759
Symbol
gbf1
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113538486 (gbf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113538486 (gbf1)
Membrane trafficking [BR:
phyp04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
113538486 (gbf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
TNFAIP8
Motif
Other DBs
NCBI-GeneID:
113538486
NCBI-ProteinID:
XP_026789396
LinkDB
All DBs
Position
Unknown
AA seq
1870 aa
AA seq
DB search
MDKNIYIIQGEIATVVGAIKRNSRWSTHTQLDEEQDPLLSSFSHLKETLNNIKDLSEVEP
NVFLRPFLEVVRSEDTTGPITGLALTSVNKFLSYGLIDANHEGAAEGIENMADAVTHARF
VGTDPASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEMRLSELLRKSA
EHTLVDMVQLLFSRLPQFKEEAKSFVGTNMKKAYNILWKNKRVQLKMRAGGMSESSKWKK
QKRSPRPSRHMVRSPSGQMDQAQLSALSNNLSGGVPFFEQQGDGTAALPVSDSAASSISN
PTADSGLSSCSKATSKEDLTDLESCSTATTPSTAASTDATMLDMQSEGRQVERTQSASVE
SIPEVLEDRDSLVDQSDSASVHDMDYVNPRGVRFTQSTQKEGAALIPYGLPCLRELFRFL
ISLTNPHDRHNSDVMKHMGLQLLNVALEATHIAPYQSLLVLVKEELCRHLIQLLSEDRIN
LYAASIRVCFLLFESMRGHLKFQLEIYLKKLMDIITSENPKMPYEMKEMALEAVVQLWRI
PSFVTELYINYDCDFYCSNLFEDLTKLLSKNAFPVSGQLYTTHLLSLEALLTVIDSIEGH
CQAKVMNRATEQEHSETLTAEGEASVDSTTDAVTEAGKALFGSNGQTAVESGVPSVCPPT
SGHLMAEKMRLGRQDQEETDTAEKKSPKKPQRFTSCLPDSQELMSIKNKKKLLITGTEQF
NQKPKKGIQFLQEKGILSSPMDTSEVAQWLRENPRLDKKMIGEFISERNSMELLDSFVNT
FTFQGLRIDEALRLYLEAFRLPGEAPVIHRLLETFTDNWHKVNGNPFLSNDAGFALAYAV
IMLNTDQHNHNVRKQNIPMTVEQFKKNLKGVNGGTDFDQDMLEDIYNAIKNEEIVMPDEQ
KGLVKENYVWSVLLHRGATSEGIFLHVPAGSYDHDLFTMTWGPTIAALSYVFDKSLEDTI
IQKAITGFRKCAMISAHYGFSDVFDNLIISLCKFTTLNSESVENLPTVFGSNPKAQIAAK
TAFHLAHRHGDILREGWKNIMDAMLQLFRAELLPKSMVEVEDFVEPNGKISLQREETPSN
RGESAVLSFVNWLTLSGGAEQSGQRGPSTENQEAKQAALLCIKHCDPEKLITESKFLQLE
SLQELMKALISVTPDEETYDEEDAAFCLEMLLRIVLENRDRVSCVWQTVRARLYHLCVHA
NESCFLVERAVVGLLRLAIRLLRREDISSQVLHSLRLLLMMKPHVLSRVSREVAYGLHEL
LKTNAANIHCTEDWYTLFTLLECIGAGVKPPAALQVTSSSPDSDTGAQSDSELSSYHQSE
VTLDRGYTSDSEVYTEHSKPRIPRSATEVEVGWLVVGKDDLDSAKAPLAPDSKPQTPLIN
QYSLTLGQDMGLHDTKSLIKCVESLSFIVRDAAHVTPENFELCVKAIRVFVEASLNGGYR
THEKKKSHKYDSKASRLRKKPREKDGVSRRAKPTSQRPSRSHSDDEEDEGVPASYHTVSL
QVSQDLLDLMHTLHTRAASIYNSWAEEQRHLEASGKKIEADSQTLWSSCWCPLLQGMAWL
CCDARRQVRMQALTYLQRALLVHDLQTLDAVEWESCFNKVLFPLLTKLLDNISPADVGGM
EETRMRACTLLSKVFLQHLSPLLSLPTFAALWLTILDFMDKYMHAGSSDLLLEAIPESLK
NMLLVMDTAGIFHSADSRTGYSDLWEITWERIDCFLPHLREELFKQAVMPEPVPSVPIEP
APASVPISPPSHYVPSPAPVPTAPTEPKTPSRPASPQDIQTPSANGTDRSSPVPPSTPPM
PTPVKSSADSPPTLSQSPLILQPLASPLQVGVPPMTLPIILNPALIEATSPVPLLPAPRP
TETADTSEVK
NT seq
5613 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaatatatacatcatccaaggggagattgcaacagtggttggtgctatcaag
agaaactccagatggagtacacacacacagctggatgaagagcaggacccacttctcagc
agtttcagtcaccttaaggagaccctcaacaacatcaaagacctctctgaagtggagccc
aatgtgtttctccgacccttcttggaagttgttcgctcagaggatacaactggaccaatc
acaggcctcgctctcacgtctgtcaacaagttcctctcatatggcctcatagatgccaat
catgaaggcgcagcagaggggattgagaacatggctgacgcggtcactcatgcaagattt
gtggggacagaccctgctagtgatgaagtggtacttatgaaaatcctccaggttttgaga
actttgctgctgaccccagtgggagcccatctgacgaacgagtctgtgtgcgagataatg
cagtcctgcttccgtatttgctttgagatgagactaagtgagctgctgaggaaatcagcc
gaacacacgctggtggacatggtgcagctgctcttctccagattaccacagtttaaagag
gaggctaaaagttttgtgggcaccaacatgaagaaggcttacaatatcttatggaaaaac
aaacgagtccagctgaagatgcgtgctggtggaatgagcgagtcatccaagtggaagaaa
cagaagcgttctcctcgtccctctcgtcacatggtgcgcagcccttcaggacagatggac
caagcccagctcagcgctctcagcaacaatctctcaggtggagtgccattttttgagcaa
cagggtgatggtactgcagcgctgcctgtttctgatagtgcagcctcctccatctccaac
cctactgcagacagtggactgtccagctgctctaaagccacatctaaagaagacctcaca
gatctggagagctgctccacagccaccactcccagcacagcagcctccactgatgccacc
atgctcgacatgcagagtgagggtagacaggtagaacgtactcagtctgcctcagtagag
tccattcctgaagtgcttgaggaccgagattcattagtggatcagtctgactctgcatct
gtgcatgacatggactatgtaaatcccagaggcgtgcgcttcactcagtctactcagaaa
gagggtgcagctctgatcccttatggactcccatgtctgagagagctcttccgctttctc
atttctctcaccaacccgcatgaccgccacaactcagatgtgatgaagcacatgggtttg
cagctgctcaatgtggctctggaggccacacacatcgctccctaccagtcactgctggtc
ctagtcaaagaggaactctgcagacatctcatacagttattaagtgaagatcgaatcaat
ttgtatgctgcttccatacgagtctgctttctgctgtttgagagcatgcgtggacatctc
aaatttcagcttgagatttatttgaagaagctaatggacatcattacctcagagaaccca
aagatgccctatgaaatgaaggaaatggcccttgaggcagttgtgcagctgtggagaatc
cctagctttgtgactgagctgtatattaactatgactgtgatttctactgttccaacctt
tttgaggacctcaccaagctgctctccaagaatgcttttccagtctctggacagctctac
acaacccatcttctctcacttgaagccctgttaactgtaatagacagcatagagggccac
tgtcaggccaaagtgatgaacagagctactgagcaagagcattcagaaactttaacagct
gaaggagaggcctctgtcgacagtaccacagatgcagtcacagaggctggcaaggcttta
tttggatcaaatggacagactgcagtagagtctggagtgccatcagtatgccctccaacc
agtggacatctcatggctgaaaagatgaggctgggtagacaagaccaggaggagactgat
acggctgaaaagaaaagtcctaaaaagcctcagcgtttcaccagttgtcttccagactcc
caggaactgatgagtatcaaaaacaagaaaaagcttctcatcacaggcacagagcagttc
aatcagaagcctaagaagggcatccagtttctgcaagaaaaaggtattctgagcagccca
atggacaccagtgaggtggctcagtggctaagagaaaacccccgactggacaagaagatg
attggagaattcatcagtgaaaggaacagcatggagttgctagacagttttgtcaacacg
ttcactttccaagggctgcgtatagatgaggcactgcgtttgtatctggaggctttccga
cttcctggcgaagcgccggtcattcatcggctcttggagaccttcactgacaactggcat
aaagtaaatgggaatcccttcttgtcaaatgatgctggttttgctttggcctatgctgtc
attatgttgaacacggatcaacacaaccacaacgttcgcaagcagaatatccccatgact
gtagagcaattcaagaaaaatctgaaaggtgtgaatggtggtacagattttgatcaggac
atgctggaagatatctacaatgccatcaagaatgaagaaattgttatgcctgatgagcag
aaaggcttggtgaaggagaactatgtgtggagtgtgttgctacacagaggggccacttct
gaggggatcttcctccatgtgcctgcaggcagctatgatcacgacctgttcacaatgacc
tggggcccgacaatcgctgccctttcctacgtgtttgacaagagcttagaagacaccatt
atccaaaaagccattacaggcttcaggaaatgtgcaatgatctcagcacactatggcttt
agtgatgtttttgataatttaatcatctccctttgcaagtttacgacactcaacagtgag
tctgtagaaaacctgcccacggtttttggcagtaaccccaaggctcagatagcagcaaag
actgcgtttcacctcgcccatcggcatggcgatattttgcgagagggttggaagaacatc
atggatgctatgctgcagctcttcagggctgagctcttacccaaatccatggtagaggtt
gaggattttgtagagcctaatggaaagatttctctacagcgtgaggagacaccatcaaac
aggggagagtcggctgtgttgagctttgttaattggttgacactgagtggtggagcggag
cagtcaggacagcgcggcccctctactgagaatcaggaggccaaacaggctgccctgctc
tgtataaagcattgtgaccctgagaaactgatcacagaaagcaagttcctgcagctggaa
tctctgcaggagcttatgaaggccctcatctcagtgacacctgatgaagagacctatgat
gaagaagacgctgctttctgtctagagatgcttctgcgcattgttttggagaatagggac
cgggtgtcgtgtgtgtggcagactgtccgtgcccgcttgtatcatctgtgtgtgcatgcc
aatgagagctgcttcctggtagaaagagctgtagtgggattgctgagacttgctatacgc
ttgctgcgccgagaggacatcagctcacaggtgctgcactctttgcgcctgctcctaatg
atgaagcctcacgtgttgtccagagtgagtcgagaggttgcctatggtctacacgagctg
ctcaaaaccaatgctgccaacatccactgcactgaagactggtacactctttttacgctg
ctggagtgcatcggtgctggagtcaaacctccagctgcactgcaggtcaccagcagcagc
cctgacagtgacacaggtgctcagtctgacagtgaactgagctcataccaccagagtgaa
gtcactttggaccgaggctatacctctgactctgaggtctacactgaacacagcaagccc
agaataccccgatctgccactgaagttgaagtgggatggctagtggttggtaaggatgac
ctggacagcgctaaggcaccacttgctccagactctaaacctcagactcctcttattaac
cagtacagtttgaccttgggtcaggacatgggcctgcatgataccaaatccctcatcaag
tgtgtggagtcactctcttttattgtacgtgatgctgctcatgtcacacctgagaacttt
gagctttgcgtgaaagccatccgagtgtttgtggaagccagtcttaatggaggttatcgc
acccatgagaaaaaaaagagccacaaatacgactcaaaagctagtaggctgcggaagaag
ccgcgagagaaggatggtgtgtcccggcgagctaaacccaccagtcagcggccctcccgt
tcccacagtgacgatgaggaggacgagggggtgccagccagttaccatacggtgtcttta
caggttagtcaggacttgttagatctgatgcacacactgcacacgcgggcagccagtatc
tacaactcatgggcagaagaacagcgccatctggaggccagtggaaagaagattgaagct
gactctcagacactgtggtcaagctgctggtgtcctttgctccaaggtatggcctggctg
tgctgcgatgctcggaggcaggttcggatgcaggctctcacttacctccagagggcgctg
cttgtacatgatctgcagacactggatgctgtggagtgggaatcctgtttcaacaaagtc
ctgtttccactgctgactaagctcttagacaacatcagcccagcagatgtcgggggcatg
gaggagaccaggatgagggcctgcacactgctctctaaggtgttccttcagcatctctcg
ccactgctttctctgcccacattcgctgctctctggcttaccatcctagacttcatggac
aagtacatgcatgctggctccagtgacctcctgttggaggcgatccctgagtctctgaag
aatatgctgttggtaatggacacagctgggatcttccacagtgcagactcgcgtacaggc
tactctgatctgtgggagatcacctgggagaggattgactgcttcctgccccatctcaga
gaggagcttttcaaacaagctgtcatgccagaacctgtccccagtgtacctatagaacct
gctcccgcttctgttcccatttctccaccctcccattatgtgccatcccctgcaccagtg
ccaactgctcccacagagccaaagacccccagcagacctgcatctcctcaggacatacaa
acacccagtgccaatggaactgatagatcatctccagtgcccccctctactcctccaatg
cccactccagttaagagctcggctgactccccgcccactctctctcagtctcctttaata
ctccagcccctagcctctccactacaggtgggcgtgccccccatgacactgccaatcatt
ctaaatcccgccctcatagaagccacatcgcctgtacccctgcttccagcgcctcgtcca
accgaaaccgctgacacttcagaggtcaaatag
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