Pangasianodon hypophthalmus (striped catfish): 113538520
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Entry
113538520 CDS
T05759
Symbol
six2
Name
(RefSeq) homeobox protein SIX2
KO
K19472
homeobox protein SIX2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113538520 (six2)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
113538520 (six2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
HTH_72
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
113538520
NCBI-ProteinID:
XP_026789455
LinkDB
All DBs
Position
Unknown
AA seq
297 aa
AA seq
DB search
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENNENSNTNSHNALTSSMNGNKTMMGSSDEDKTPVGTPDHTSSSPALLLTSAS
GLQPLHGLAAPPAPSAVPVPSAVTVPSADSLHHQHHHHGLHDTILNPMASNLVDLGS
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgcttccgactttcggctttacgcaagagcaagtggcgtgcgtgtgcgaggtc
ctgcagcagggcggcaacatcgagcgccttggccgctttctgtggtccctgccggcctgc
gagcacctccacaagaacgagagcgtgctcaaggccaaggccgtggtcgctttccaccgg
ggaaacttcagagagctctataaaatcctcgagagccaccagttctcgccgcacaaccac
ccgaaactacagcagctgtggctcaaggcgcactacatcgaggcggagaagctgcgcgga
cggccgcttggagccgtgggcaagtaccgagtgcgtaggaagttcccgctgccccggtcc
atctgggatggcgaggagacaagctactgctttaaggagaagagccgcagcgtgctgagg
gagtggtacacccataacccgtacccttcaccgcgggaaaagcgcgagctggccgaagcc
accggcctgaccaccactcaggtcagcaactggttcaaaaacaggaggcaacgcgaccgc
gcggcggaggccaaagaaagggaaaacaacgagaactccaacacgaacagccacaacgca
ctcacgtcgtccatgaacggaaacaagacgatgatgggcagctcggacgaggacaaaacc
cccgtcggaactccagatcacacgtcgtcgagccctgcgctgctgctcacttccgcctcc
ggcctgcagcctctacacggcctggctgctccgcctgcacccagcgcagtaccagtgcca
agcgccgtgactgtaccaagcgcggactcactgcaccaccaacaccaccaccacggcctg
catgacaccatactgaaccctatggcctccaacctggtcgatctgggctcttaa
DBGET
integrated database retrieval system
