Pangasianodon hypophthalmus (striped catfish): 113538573
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Entry
113538573 CDS
T05759
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113538573 (msh4)
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Meiosis-specific proteins
Others
113538573 (msh4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
AAA_14
AAA_22
nSTAND3
AAA_23
AAA_29
Motif
Other DBs
NCBI-GeneID:
113538573
NCBI-ProteinID:
XP_026789531
LinkDB
All DBs
Position
Unknown
AA seq
929 aa
AA seq
DB search
MLRSSTEEVTAGYSSDTGASSLSGSERSFSAAPRRRQDDGAPSPSPLSSSHTPHSASSCS
GPGSTSTSVAGVQTTSVTKTPATTGVNRVNSSSSSWTGGGVYSSLCRSSSTPRLRRTPGS
ATRTLLGPALQRELNMTSSSSASVCHAASVIVAVVEGRGLARGEIGMASINTRSPELVLS
QFADTGTYAKVITKLHILVPLEILMPDTASEKGQGTKLYNLITENFSSVAFTAIQRKYFN
EGKGLEYIQQLCAPEFNTVLMDVQTKYYCLAAAAALLKYLEFIQNSVYAPRSLKVSFTGS
EQTAMIDAVSARNLELVINNRGHRSEHTLLEVLNYTKTPGGERRLRSNILEPLLDVDTIN
TRQDTIQELLQGEELFFGLKSAITQFLDIDQLLSALVQLPKQETVEVAEAKIMQVIQLKH
TLELIEPLKMVLKDAKTSLLKAYYTSLEDSRFNSILDQIKTVINNDTSYMKGSLNMRTQK
CYAVRPNVNELLDIARRAYTEVVDDIAGLVDQLGEKYGLPLRTSFNTARGFFIQMRLEGF
GLPDGQLPGEFIKVTRQKNNYSFTTLDLMKMNDRCDEALKEIFHMSYIVVCRLLNEVYKH
IHCLYKLSDAVSMLDMLLSLANVCTISDYVRPEFTDTLAIRQGRHPILERVAGQQPIPNN
SHISEGSNFVIITGPNMSGKSTYLKQVALCQIMAQIGSFVPAEFASFRIADQIFTRIGVD
DDFETNSSTFMVEMKEVSYIIHNASNRSLIIIDELGRGTSAEEGIGICHSVCEFLINLKA
FTLFATHFLELCQLESLYPNVENQHMQVQHMRGTENSAESVVYTYLLTQGFSEESNYGIR
AAENTSFPLSIIQEAKAISAKVSQKLWAKHHSDPTTLRQGAAFRLATRLLQTARNSRLDP
DSLCLYLKGLKRSYEAELKDSLESMDTEE
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgctccgtagcagcactgaagaggtaacggccggatacagttcagacaccggcgcaagc
agcttgtccggttctgagcgcagcttcagcgcagctccgcgcaggcggcaggacgatggc
gcaccgtccccgtctcctctgtccagctcacacacaccacacagcgctagctcctgctcc
ggtcctggatcaacctccacctctgtagctggtgttcagacaacaagcgtaaccaaaact
ccggctacaacaggtgtgaacagggtgaactcgtccagctcttcatggactggtggtggg
gtctacagttctctgtgcagaagctcaagcactcctcgcctcaggagaacaccaggctca
gctacgcgcaccctgctgggaccagctctacagagggagctcaacatgacatcttcctcg
tctgcatctgtgtgtcatgctgcatctgtaatcgtggctgtggtggagggccggggttta
gccaggggagagatcggcatggccagcatcaacacgaggtcccctgagttggtactctca
cagtttgcagatactgggacttatgccaaggtaattaccaaactgcatatcttagtgcct
cttgagattctcatgccagacactgctagtgagaaagggcaaggaaccaagctctacaac
ctcatcacagagaacttttcgtctgtagctttcactgcaattcaaaggaagtactttaac
gaggggaaaggactggagtatatccagcagctctgtgcgcccgagttcaacactgttcta
atggatgtacaaaccaagtactattgtctggcagctgcagcagcgctccttaagtactta
gagttcattcagaactctgtctatgctcccagatctctgaaagtgagcttcaccggcagt
gagcagactgccatgattgacgcagtctcagccaggaacttggagttagtaattaacaac
aggggccacaggagtgaacacactctacttgaggtcttaaattacacaaaaacaccaggt
ggtgagaggaggcttcgctctaacattctggagcctctgttggatgttgacaccattaac
acacgacaggacaccatacaggaactgctgcagggtgaggaactcttctttggtctcaag
agtgcaatcacacaattcttggatatagatcaactgctttctgctcttgtgcagctcccc
aagcaagagacggttgaagtggctgaagcaaagataatgcaggtcattcagctgaaacac
acgctagagctgattgaaccactcaagatggtgttgaaggacgctaagacatccttactg
aaagcttattacacttcactagaagatagcaggtttaacagcattttggatcaaatcaaa
acagtgatcaacaatgacaccagctatatgaagggcagtctgaatatgcgcacacaaaag
tgctatgctgtacgccctaatgtcaatgaattgctagacattgcacgtcgagcctacact
gaggtagtggatgatatagcaggattagtagatcagctaggagagaagtatggccttcca
ctgcgcactagttttaacactgctcgaggtttcttcatccagatgaggctggagggtttt
ggcctgcctgatggacagcttccaggagagttcatcaaagtaactagacaaaaaaacaac
tacagcttcactacgttagacctgatgaagatgaatgatcgctgtgatgaagccttgaag
gagatatttcacatgtcttacattgtggtgtgcaggttacttaatgaggtgtataaacac
attcactgcttgtataagctctctgatgctgtatccatgctggatatgctgctctccctc
gccaatgtttgcactatttcagactatgtgcgccctgaattcactgatacactggcaata
agacaaggccgccatccgattctggagcgcgttgctggccagcagcccatccccaacaac
agccatatctctgagggaagcaactttgttataatcacaggcccgaacatgagtggcaag
tccacttacctcaaacaggtggccctctgccaaatcatggctcagataggatcatttgtg
cctgctgaatttgcctcgttccgtattgctgatcaaatattcactcggataggagtagac
gacgattttgagaccaactcatcaacatttatggttgagatgaaggaggtgtcctacata
atacacaatgcaagtaacaggtcactcattattattgatgagctgggacgtggcactagt
gcagaggagggcatcggaatttgccactcggtttgtgaattcctcatcaatctgaaggca
ttcactctgtttgccacccacttcctggagctgtgtcagttggagagtctttaccccaac
gtagagaatcagcacatgcaggtccagcacatgcgtgggactgaaaacagcgcagagagt
gtggtctacacctacctcctgactcaaggcttctctgaggaaagcaactatggtataaga
gcagcagagaacacctcatttccactgtccatcatccaggaggccaaggctatatcagcc
aaagttagccaaaagttatgggctaagcatcatagcgacccaaccaccctgcgacaaggg
gcagcgtttcgtctcgccaccagattgttacagacggcccgaaactccaggttggatcca
gatagtctctgtctttacctaaagggcctaaaaagaagctatgaagctgagttaaaggac
agcttagagtccatggacacagaggagtga
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