Pangasianodon hypophthalmus (striped catfish): 113538602
Help
Entry
113538602 CDS
T05759
Name
(RefSeq) spectrin beta chain, erythrocytic-like isoform X1
KO
K27409
spectrin beta, erythrocytic
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113538602
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
113538602
Intermediate filaments
Intermediate filament-binding proteins
113538602
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
SOS1_NGEF_PH
SCAR_helical
ABATE
FAM133
Motif
Other DBs
NCBI-GeneID:
113538602
NCBI-ProteinID:
XP_026789575
LinkDB
All DBs
Position
Unknown
AA seq
2353 aa
AA seq
DB search
MTSTTDFDSADITQQYSRINTRFELSDEELDNDNSTARLFERSRIKALADEREAVQKKTF
TKWVNSILARVSCRISDLYLDLRDGKMLIKLLEVLSGERLPRPTRGRMRIHCLENVDKAL
QFLREQRVHLENMGSHDIVDGNHRLILGLIWTIILRFQIQDIVVEVGKVDQTGKQETRSA
KDALLLWCQTKTAGYPNVNVTNFTTSWKDGLAFNALIHKHRPDLVDYGNLQRSNPTHNLQ
QAFSVAERNLGVTKLLDPEDVFTENPDEKSIITYVVAFYHYFSKMKALAVEGKRVGKVLD
HAIEAEGMIKKYETLSSDLLTWIEQTIIILNNRKLANSLNGVQQQLQAFNSYRTLEKPPK
FQEKGNVEVLLFTIQSKMRANNQKVYTPKEGALVADINRAWERLERAEHERERVLRDELI
RQEKLEQMARRFDRKAGMRETWLLENQKLVSQDNFGYDLPAVEAAKKKHDAIETDIAAYE
ERVQSLVALSKELEAERYHDAKRIDAMKDNILRLWGCLQKLLSDRRVRLEKNLTLQRIFQ
EMLYILNSMDEMKTRLQSPDFGKHLLEVEDLLQKHALIEADIAVQAERVSSANAAALKFA
NGDSYKPCDPQVIRDRVQHLDLCYQELCALAAQRKARLEQSRRLWNFIWEIAELESWIRE
KEHIFSSLDYGKDLTSVLVLQSKHSAFEDELGARRDNLKQVMGEGEKMVEAKHFGAPKVQ
QRMDEVQRQWQQLEELAAFRKRNLQDTQRFFQFQGDADDLKAWLLDAIRQMSTEDIGHEE
YTTQRLLKRHRALSDEAVKNGATIDALTKQANSLPEELKNTPDIQRRLKDIRDLYMELLS
LSDLRKKKLEDTMALYTIFSETDACELWMGQKETWLVGLETPEKLEDLEVVQNRLSILAQ
EMGNMQTQVDNINRAAKQLEDSRHPRSKEVKDCQTRLNKRWEEFKAMVEYKKHKVDSALS
LHNYGLECDETGAWIKDKTRVIESTLDLGNDLAAVMTIQRKLYGIERDLAAIQDKLDFLH
GEAQQLVKDHPENATDILARQEELNKAWETLKQTLKDREDSLGEVSKLQNFLQNLDDFQS
WLFKTQKAIASEEMPTSLPEAEELLNLHDALKEDMDCHEEDYHSVRDTGAAVTRDKEEDV
QYQQLDQRLKGLDKGWDELQKMWDSRKNFLDQGMGFQQFSRDAKQAEAILNNQEYILAHL
EQPDTLDGAEKALKKHEDFVTTMDANEDKILNTLEGGQRLVDSGNLYSPKVKDKIKSIQD
RYKTNQDKAKEVSEKLRDNKDLQHFLQNTQDLTLWINEKMLTAQDTSYDEARNLHSKWQK
HQAFMAELASNKDWLNKIDQEGKELMASKPEFEPIVKDRLTKLHELWNKLEHTTQEKARL
LFDAHRSELFEQSLADLKKWLANLQQQLQGDVDEEVKDLTSANILLKKHQMTENQVRDRA
RELEELQEAVQQHTPLTEEQPELEAEQQVIQRDFQQLLTPLAERKGKLEAAKAVYQFYRD
VADEILWLEERLPMAMSQDHGNNLQTVQLLLKKNQTLQKEIEGHQPRVDEVLQRGQRMMA
AAEGSPEAEHMSEEMTRLKEVWARLQDEMAKRRARLNASNDAQQYYNDADEAEAWIGEQE
LYMIADDKAKDEQSAVILLKRHLILKQVVDDYADSVQKLADRAQKMFAEEHPEGEAIIRR
QGQVDKQYAGLKELAEDRRRNLDHTYHHFLLSREVEDLEQWIAERDVVASSQEMGQDLDH
VTILRDKFREFARETGTVGQERVDTVNHTIDELIEAGHSESSTLAEWKDSINESWADLLE
LIDTRTQLLTSSYDLFKYFYDGKELVVQIEEKQNELPEDVGEDFSKAESFHRMHAAFERD
ISSLGKQVQQFQDTAARLHAQYAGVQADTIKATEKEVVDAWKGLLAACAGRRKQLEETAN
KFRFFTMVRDLMAWMESIIQQIETQEKPRDVSSVELLMKYHQGIRAEIETRGPKFNNCVE
LGRTLLAQRHRDSDEIKEKLMQLIEKRKEMMLKWDERWDWLRLLLEVCQFARDASVAEAW
LIAQEPYVASKDLGESVHEVEKLLKRHEAFEKSTATWEERFSALERLTTLELLEIRKQQQ
EMQQYRQEEDSRREDTGFAEESSRLDTIEEQSLSGMAAVDPSSGRGDSTAGESVVPIVSD
IQESGSVELDPSTSSQAPEEAEQAATLPIMPTQSQPTLLQGTLTRKHEMEGPNKKAANRS
WNSIYFVLKPGQLSAYKDAKSFVHSVPYHGEEPLSLHNAVCEVLTNYKKRKHVFKLWLED
GSEYLFQCRDEEELKIWTQAIEKAAKYETEEPAEGPSEPRAQTLPPPSTSSASEVPSAKK
EKEKRFTLFTKKK
NT seq
7062 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccacggactttgacagtgctgatatcacacagcagtacagccgcatcaac
acgcgctttgagctgtccgacgaggagctggacaatgacaacagcacagctcggctcttt
gagcgttcacgcatcaaagctctcgcagatgagcgagaagctgtgcaaaagaagaccttc
acaaaatgggtaaactccatcctggctcgagtcagctgccgtatctcagacctctatcta
gacctgcgggatggaaagatgctcatcaaactacttgaggttctgtcgggcgaaaggctg
cccaggcccactagaggtcgaatgaggattcactgtctggagaatgtagacaaggccctg
cagtttctaagggagcagagggttcatttggagaacatggggtcacatgatattgtagac
gggaaccaccgtcttatcctgggactcatttggacaattattctacgcttccagattcaa
gacattgtggtagaggtaggcaaggtagaccagacgggtaagcaggagacacgctctgct
aaagacgccttgctgctttggtgtcaaacgaagacagctgggtatccaaatgtaaatgtc
accaacttcaccacaagctggaaggatggcttagcttttaatgcccttatacacaaacac
aggccagatctggttgactatggcaacctccagagatccaatccaactcacaatcttcag
caagctttcagtgtggctgagagaaaccttggagtcaccaagctcctggacccagaagat
gtgtttaccgagaacccagatgagaagtccatcatcacttatgttgttgctttctaccac
tacttctccaagatgaaagctctggcagttgaaggcaagcgagttgggaaggtgctggac
catgccattgaggcagaggggatgattaagaagtacgagacactttcctcagacctgtta
acatggattgaacagaccatcattatcctgaacaaccgcaaactcgcaaactctctgaat
ggagtccagcaacaattacaagccttcaactcataccgtactctggagaagcctccaaaa
ttccaggagaagggaaatgtggaggtactgctcttcacaatccagagcaagatgagggcc
aacaatcagaaggtttatacccctaaagagggcgcactggtggcagacatcaacagggca
tgggagcgattggagcgggctgaacatgaacgagagcgggtgcttagagatgagctcatc
aggcaggaaaagcttgaacaaatggcccgtcgctttgacagaaaggctggcatgagagag
acctggctgttggagaaccagaaactggtatctcaggacaactttggatatgatctacca
gcagttgaagcagcaaagaaaaagcacgatgccattgagactgacattgctgcatatgag
gagcgtgtacaaagcctggtggcgttgtctaaagagctggaggcagagaggtaccatgat
gctaaacggattgatgcaatgaaagacaatatcctgaggctctggggctgccttcagaag
cttctgagcgatcgcagggtccgtctggagaaaaatctcaccttgcaaagaatcttccag
gaaatgctttacatccttaactcgatggatgaaatgaagactcgtctccagtcacctgat
tttggcaagcacttgttggaggtggaggaccttttgcagaagcatgctttaattgaggca
gatatcgctgtgcaagcagagagagtgagctctgctaatgcagctgctctcaaatttgca
aatggagacagctacaaaccatgtgacccccaagtgattcgagacagggtacagcactta
gacctatgttatcaggagctgtgtgcacttgcagcacaacgcaaagcccgtttggagcag
tctcgtcgtctctggaacttcatttgggagatagctgaactggagagctggatccgtgaa
aaggaacacatattttcctctcttgactatggcaaggacctgaccagcgtgctggtgctg
cagagtaaacacagtgcttttgaagatgagctaggtgctcggcgtgataacctgaagcag
gtgatgggagaaggtgagaagatggtggaagccaagcattttggtgccccgaaggtgcag
cagcgcatggatgaagtgcagaggcaatggcagcaactggaggagctggctgcattccgc
aaacggaacctccaggacacccagcgtttcttccagttccagggtgacgctgatgacctt
aaggcctggttgttggatgccatcaggcagatgagcactgaagatattgggcatgaggag
tacaccacacagaggctgctcaagaggcatcgtgccctgagtgacgaggcagttaagaat
ggagccaccattgatgctttgactaaacaggccaattcactgcctgaggagttaaagaat
acacctgacatccaacgacgtctgaaggacattagggatctgtacatggagctcttgtct
ctttcagacctgcgaaagaagaagctagaggacactatggcactgtacaccattttcagt
gagacggatgcctgtgagctctggatgggtcagaaagagacatggctggttgggttagaa
acaccagagaagttggaagatctggaggttgttcagaataggttaagcatccttgcccaa
gaaatgggcaacatgcagacacaggtagacaacatcaacagagcagccaagcagctagag
gatagcaggcacccacgatccaaagaggtgaaagattgtcagacccgtctcaataagagg
tgggaagagtttaaggctatggtagaatataagaagcataaggtggattcagcactcagt
cttcacaactatgggcttgagtgtgatgaaactggggcatggatcaaggacaagacacga
gttattgagtctacgctagaccttggaaatgacctggctgctgtcatgactatccaaagg
aaactttatggcattgaaagagacctggctgctattcaggataagctggacttcctgcat
ggtgaggctcaacaacttgtcaaagaccatcctgagaatgccactgacatcctggcccga
caagaagagctaaacaaagcttgggagactttgaagcaaacgctaaaggatagagaggac
tctctcggtgaagtaagcaagttgcaaaacttcctgcagaacctggatgactttcagtcc
tggcttttcaagacacagaaggccattgcatctgaggagatgcctacaagcctgccagag
gcagaggagctcctaaatcttcatgatgcactaaaagaagatatggattgccatgaggag
gactatcacagcgttagagacactggagcagctgtcactcgtgacaaagaggaagatgtc
caataccaacagctggatcagaggctgaagggcctagataagggctgggatgagctgcaa
aaaatgtgggacagccgaaagaacttcttagaccaaggcatgggttttcaacagttctca
agagatgcaaagcaagctgaagccatcttgaacaaccaggagtacattctggctcacctg
gaacagcctgacacacttgatggagcagagaaggctttgaagaagcatgaggactttgtc
accactatggatgctaatgaggacaaaatattaaatacactagaaggaggtcaaaggctg
gtagacagtggaaacctctactcaccgaaagtaaaggacaaaataaaatctatccaagac
agatacaagacgaaccaagacaaagccaaggaggtgtctgagaaactcagagacaacaaa
gacctgcaacactttcttcagaacactcaggatcttactctgtggataaatgagaagatg
ctgactgctcaggacacctcatatgatgaggctcgcaaccttcatagcaaatggcagaag
caccaggccttcatggcagaactggcttcaaataaggattggctcaataaaattgaccag
gaaggtaaagagttgatggcctccaaaccagagtttgaacccattgtgaaggaccgtctg
acaaaacttcatgagctttggaacaagctggaacacaccacacaggaaaaggcccggctt
ctgtttgacgcacaccgctctgaactgtttgaacagagcttggctgatttgaagaagtgg
ttggctaatctgcaacagcagctccagggtgatgttgatgaggaggttaaagatcttact
agtgccaatatccttctcaagaagcatcagatgactgagaatcaggttcgagaccgagcg
cgggagctggaagagctgcaggaagctgtacagcagcatactcctctaactgaagagcag
cccgagctggaagctgagcagcaggtcatccagagggactttcagcagctccttacacct
ctggctgaacgcaagggaaaactcgaggcagctaaagctgtgtaccagttctacagagat
gtggctgatgagatactctggcttgaagagaggttgcctatggccatgtcacaggatcat
ggaaacaatctacagacggtccagcttctcctgaaaaagaatcagaccctccagaaggag
attgaaggtcaccagccacgtgtggatgaggtgttgcagcggggtcaacgtatgatggca
gctgcagaagggagcccagaggcagagcatatgtctgaggaaatgacgaggttgaaggag
gtgtgggcacggctgcaggatgagatggcaaaacggcgagctcgactcaatgcctctaac
gatgcccagcagtactacaatgatgcagatgaagcagaagcatggattggtgaacaggaa
ctctacatgattgctgatgataaagcaaaggatgaacagagtgctgtgattctgctaaag
cggcacttgattctgaagcaggttgttgatgactatgcagactctgtacagaagcttgct
gaccgtgctcagaagatgtttgctgaggagcatcctgaaggggaggccatcatccggagg
cagggtcaggtggacaaacagtatgcagggctgaaggagctggctgaggaccgcaggagg
aaccttgatcacacttaccatcacttcctcctgagccgggaggtggaagatctggagcag
tggattgctgagcgcgatgtggtggcttcttcacaggagatgggacaggacctggaccat
gtcacgatactgagggataagttcagggagtttgcccgggagacggggactgtgggacag
gagcgggtggacactgtgaatcacaccattgatgagctgatcgaggctggtcatagtgaa
tcatctactctggctgaatggaaggacagcattaacgagagttgggcagatctcttggag
ctcattgacacccgcacacagctcctcacttcttcttatgatctgtttaagtacttttat
gatggcaaggagttggtagtccagatcgaggagaaacagaatgagcttccagaagatgtg
ggagaggatttcagcaaggcagagtctttccatcgtatgcatgctgcatttgagagagat
atcagctcccttggaaagcaggtacagcagttccaggacactgcagctcgtctgcatgcc
cagtatgctggagtccaggcagataccatcaaggcaacagagaaagaggtggtagatgcc
tggaagggtcttctggctgcctgcgcgggcaggcggaaacagctggaggagacagcaaac
aagttccgctttttcaccatggttagggacctaatggcctggatggaaagcatcatccag
caaatagaaactcaggagaaacccagagatgtctcatcagtggagctgctaatgaagtat
caccaagggatccgtgcagagattgagactcgtggaccaaagtttaataactgtgtggag
ttagggcggactctactagcacagaggcacagggactcagatgagatcaaagagaagttg
atgcagctaattgagaagaggaaggaaatgatgcttaaatgggatgagagatgggactgg
cttagactgttgttggaggtgtgccagtttgcccgggatgcatctgtagcggaagcctgg
ctgatagctcaggagccgtatgtggccagtaaggacttgggtgaatctgtgcatgaggta
gagaagctgctcaagaggcacgaggcctttgagaaatccactgccacctgggaggaacga
ttctctgcactggagcgccttacaactcttgagctgcttgaaatcagaaagcagcagcag
gaaatgcagcagtacagacaggaagaggacagcaggagggaagacacaggctttgctgaa
gagtcctcacgtttggatacaattgaggagcagtctctttctggcatggcagcagtagat
cccagctcaggccgtggagatagcactgcaggggaatcagtggtgcccattgtttcagat
attcaggagagtggctctgtggaactggatccctcaacatcctcacaggctccggaagag
gcagaacaggctgccactctccccatcatgcctacacagtcccagccaaccctgctgcag
ggaaccctcacacgtaaacatgagatggagggacctaataaaaaagcagccaataggtcc
tggaacagcatctactttgttttaaaacctggccagctttcagcttacaaggatgcaaag
agttttgtccatagtgttccataccatggagaagaaccactgtcactccacaatgctgtt
tgcgaggttctgacaaattataagaaaaggaagcatgtgtttaaactgtggcttgaagat
ggaagtgaatacctattccagtgtagagatgaggaagaactgaagatctggactcaggcc
atagagaaggcagcaaagtatgagactgaggagccagcagaagggccttcagaacctcga
gcccagaccttgccccctccttcaacctcctctgcctcagaagttccctctgccaagaag
gaaaaggagaagaggtttactttattcacgaaaaagaagtga
DBGET
integrated database retrieval system
