Pangasianodon hypophthalmus (striped catfish): 113538661
Help
Entry
113538661 CDS
T05759
Symbol
smc6
Name
(RefSeq) structural maintenance of chromosomes protein 6 isoform X1
KO
K22804
structural maintenance of chromosomes protein 6
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyp03400
]
113538661 (smc6)
DNA repair and recombination proteins [BR:
phyp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
113538661 (smc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
ERM_helical
AAA_29
AAA_21
ABC_tran
Motif
Other DBs
NCBI-GeneID:
113538661
NCBI-ProteinID:
XP_026789701
LinkDB
All DBs
Position
Unknown
AA seq
1102 aa
AA seq
DB search
MKGFTLVGNEPIYRMNKRKSNVQHTEKPAKTRRTEGTTHGQEDEEIDDEPGFYQEHHFST
SSAGDIGVIESITLKNFMSHHLLGPFQFGPNVNFIVGNNGSGKSAILTALIVGLGGKATT
TNRGASLKSFVKYGESSAEVTVKLRNRGSDAYKGDVYGDCISVEQRITSDGCRTCKIKNK
SGCIVSTKKEELTAILDHFNIQVDNPVSILNQEMSKQFLHSKSEADKYKFFMKATLLEQM
KRDYIHIKQTKALTRDQVERQEECLRDLRQLFLQKKEKYESLSTLEKMRQTLEDLKKKMA
WALVVEKEREVQQLKEQIDKEQKDERNEHKLQLCWNRVTVIEKKLQDIQQKLGKVKEEDE
CLAEESRKLKEESKLKSKDQKNQEVVYFRAENKLKQLEKEQCLLRERINRINNSNGRRNH
EAEQTQRMKKISALKKQLEKLETESTTLNQEIKEKQQALFKGREEYDKLSMEEKNIQVSL
ESKLKRKNQLTASRSNRLRRFGDRMPELLESIDKAHAQGRFIKKPVGPIGACIRLKDPSL
AVAVESCLRGFMKTFCCDNYKDERVLQELMSPHFPKGSRPQIVVCAFADHVYDVQNRGVH
HPEFPSVLDTLIIDNPVITNCLIDMRSVECILVIKENAVARRVMQMQRPPRNCREAFTAD
GDQVYTNRYYTPEQEVMVKYLGGDPEAEIRLVQSEVENHQAQLSRFQLHLNSVRQDIQSM
EEKLRSAKIACKRNQESINRVKASIIELENAEESQTEDVSSLEEESQENEQKIELERKNV
KEAKGELEKHNKAIIDLDRKYKDVKNKREQLSDETEQLKEEQGKGEAERNKLEQTLEILE
GKLKTHQDHIKSMRENLTCRENEKEDIETKAKEICPVPQRPDRSAKSIDTEITRLRQKIT
SQESTHGNQEQVIREYAEAHSNYKNKSSQLRDLKKFIDRLDNIMTDRQARYKTLRRSLSV
RCKLYFNNFLIKLHCCGSMMFDHNNETLSISVKPPGRENDNVNDMRSLSGGERSFSTVCF
ILSLWEITESPFRCLDEFDVYMDMHNRRISLDLLLELSERQHLRQFIFITPLTTSHLPQS
SHIKIHQLQDPERETEAEEGLH
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtttcacactcgtcggaaatgaaccaatttataggatgaataaaagaaagagt
aatgttcagcatactgaaaagcctgcaaaaacccgcaggacagagggcacgacacatggc
caagaggatgaggagatagacgatgaaccaggcttttatcaggagcaccatttctctacc
tcgagcgctggggatattggtgttattgagagcatcactttgaagaatttcatgagtcat
cacctgcttggcccttttcagtttggaccaaatgttaattttattgttggaaataatgga
agtgggaagagtgctatccttactgctctcattgttggccttggtggtaaagcaactaca
accaacagaggagcctctttgaagagttttgtaaaatatggagaaagctctgcagaagtt
acagtaaaattgagaaacagaggaagcgatgcttataaaggtgatgtatatggggattgc
atctccgttgagcaaaggatcaccagcgatggttgcaggacatgcaaaatcaagaacaaa
tccgggtgtattgtttctactaagaaggaagagttaacagcaatattggaccatttcaat
atacaggttgacaatccagtctcgatcttaaatcaggaaatgagtaaacaatttctccat
tcaaaaagcgaagcagataagtacaagtttttcatgaaggccactctgctagagcagatg
aagcgagactacattcacatcaagcagaccaaagctctgacacgggaccaggtggaaagg
caggaggagtgtctgcgagatctcaggcagttgtttttacaaaagaaagaaaagtatgaa
agtctatcaacccttgagaaaatgaggcagactctggaagatttaaagaaaaagatggcg
tgggctctggtggtagaaaaagagagagaagtgcagcagctgaaggaacaaattgataaa
gaacagaaagatgaacgtaatgaacataagctgcagctttgttggaacagagttactgtt
attgaaaagaaattgcaggatatccaacagaagcttggaaaagtgaaagaggaggatgaa
tgtttagcagaggaaagtcgaaaactgaaagaagagtcaaagctcaagagtaaagatcag
aagaaccaggaagtggtgtactttcgtgctgagaacaaattaaaacaattagaaaaagag
cagtgccttcttcgggagagaattaatagaataaataatagtaatgggagaaggaatcat
gaggcagagcagacacagcggatgaagaaaatatctgctctgaagaagcagctggaaaaa
cttgagacagagtctacaacccttaatcaagaaatcaaggagaaacagcaggcccttttc
aaaggaagggaagaatatgataagctaagcatggaagaaaaaaacatccaggtctctctg
gagtccaaactgaagagaaagaaccaactcacagccagcagatccaacagactgagacga
tttggtgatcgtatgccagaactattggagtcaatagacaaagcacatgctcaaggacgc
ttcattaagaaacctgtgggaccaataggtgcatgcatcagacttaaggatccgagttta
gctgtggctgtggaaagttgcttacggggtttcatgaaaacattttgttgtgacaattac
aaggatgaaagggtcctacaggagctgatgtctccgcattttcctaaaggcagcagaccc
cagattgtggtgtgtgctttcgcagaccatgtttacgatgttcaaaaccgaggagtacac
catccagagtttccatcggttttggacactctcatcattgacaatcctgtgatcactaat
tgtttgatagacatgcggagcgttgaatgtattcttgtaatcaaagagaatgctgttgcc
aggagagtcatgcaaatgcagaggccccctagaaattgtcgtgaggccttcactgctgat
ggtgatcaggtttataccaatcgctattacacccctgaacaagaagtcatggttaaatac
ctcggtggggatccagaggcagaaattcgtctggtgcagtcagaggtggaaaatcatcag
gcacagctcagcaggtttcaacttcacttaaactcagtgaggcaagacattcagtccatg
gaggagaagctgcgcagtgccaaaatagcatgcaaaagaaatcaggaaagtattaataga
gtgaaagcatcaataattgagcttgagaatgctgaggagtcacagactgaggatgtcagt
tcactggaagaagagagtcaagaaaatgagcagaaaattgagctagagagaaaaaatgta
aaagaagcgaaaggtgaactggaaaagcataataaagcaatcatagaccttgatcggaaa
tacaaagatgtgaaaaacaaaagagagcaactctcagatgaaacagagcaactgaaggag
gagcaagggaaaggtgaggctgaacgcaataaactcgaacagaccctcgagatcttggaa
gggaagctcaagactcatcaggatcatataaaatccatgagagagaacctcacttgcaga
gaaaatgaaaaagaggacattgaaacaaaagccaaagaaatctgccctgtaccacaacgg
ccggatcggagtgccaagagcatcgacacagagatcacacgtctgcgtcagaagatcacc
tcacaagagagcacccatggcaatcaggagcaagtgatcagggagtatgccgaggctcat
agtaattataaaaacaaatccagtcagctgagagatctgaagaaatttattgatcgtctg
gacaacatcatgactgacaggcaggctcgatacaaaacactgagaagatccctctcggtg
agatgcaagttatacttcaacaatttcctcatcaaactgcactgctgcggatccatgatg
tttgatcacaacaatgaaactctttccatttcagtgaaaccaccaggtcgggagaatgac
aacgtgaatgacatgcgctctctgtctggaggtgagcgctccttctccacagtttgcttc
attctgtccctgtgggagatcacagaatccccctttagatgcttggatgagtttgatgtg
tacatggacatgcataaccgacgaatctccctggacctgcttcttgagctctctgagcgc
cagcatctgcgacagttcatttttatcacacctctgaccaccagccacctgccgcagagt
tctcatattaaaatccatcaactgcaagatccagagagagaaacggaggcggaggaggga
ctgcactaa
DBGET
integrated database retrieval system
