Pangasianodon hypophthalmus (striped catfish): 113538683
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Entry
113538683 CDS
T05759
Name
(RefSeq) ubiquitin thioesterase zranb1-B isoform X1
KO
K11862
ubiquitin thioesterase ZRANB1 [EC:
3.4.19.12
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phyp01002
]
113538683
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113538683
Enzymes [BR:
phyp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113538683
Peptidases and inhibitors [BR:
phyp01002
]
Cysteine peptidases
Family C64
113538683
Ubiquitin system [BR:
phyp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
113538683
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AnkUBD
OTU
Zn_ribbon_RanBP
PHF5
Motif
Other DBs
NCBI-GeneID:
113538683
NCBI-ProteinID:
XP_026789745
LinkDB
All DBs
Position
Unknown
AA seq
755 aa
AA seq
DB search
MLQSCRAPWQAEWPLVRREPAAGGREGGKGAFRSSARARMTDFQPKWSCEYCTYENWPSA
IKCTMCRAQRPTGPIITEEPFKSSPSLSSHLCSTQEGSSVLICPDSSARPRVRVADEAQE
IASKWSCHMCTYLNWPRAIRCTQCLSQRQQGPQQGPHRPSDGPHTSEPGCRLPAPTAPDP
CEEYNDRNRLNTRVQHWACSACTYENWPKTLRCVVCDHPKPSDAVLQEPQPESTMALSIV
NEQERTAGGGGVGGSKTAQRRLSPPVPAGQAEVQIELASGAVGAQEEHETDFKKLKQIRN
RMRRSDWLFLNACAGVVEGDLAAVEAYKSSGGDIARQLTSDEVRLLNRPSAFNAGFTLVH
LAIRFQRQDMLSVLLTEVSQHVSQQAAKCIPAMICPELTEQIRREVAAALHRRKGEFPCY
FFTDITTFTLPADIEDLPPNVQEKLFDEVLDRDVQKELEEESPIINWSLELGTRLDSRLY
ALWNRTAGDCLLDSVLQATWGIYDKDSVLRKSLHDSLHDCSHWFYTRWKEWESWYSQSFG
LHFSLREEQWQEDWAFILSLASQPGASLEQTHVFVLAHILRRPIIVYGVKYYKSFRGETL
GYTRFQGVYLPLLWEPSFCWKSPIALGYTRGHFSALVAMENDGYDNRGAGANLNTDDDVT
VTFLPLVDSDRKLLHVHFLSAQEMGTEEQQERLLRQWLDCCVTEGGVLVALQKSSRRRSH
PLVTQMVEKWLDGYRQLGTCPALSDGEEEEEDEDE
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgctccagagttgtagagcaccctggcaggctgagtggcctttggtcaggcgtgagcca
gcggcgggcgggagggaaggagggaagggggcatttagaagttctgctcgagcgaggatg
actgatttccagccgaagtggagctgcgagtattgcacatacgagaactggccatccgcc
atcaagtgcactatgtgtcgcgcccaacgacccactggccccatcatcactgaggagccg
tttaagagcagcccgagtctcagctcacacctgtgctccactcaggagggctccagtgtt
ctcatctgccctgattctagcgcccgaccccgagtacgcgtggccgacgaggcgcaagag
atagccagcaaatggtcatgccacatgtgcacctatctgaactggccgcgtgccatccgt
tgcactcagtgcctcagccagaggcagcaagggcctcagcagggccctcacaggccctca
gatggcccacacacctctgagccaggctgtcgacttcctgcaccaacggctcctgacccc
tgtgaggaatacaacgaccgtaatcgcctgaacacgcgtgtacagcactgggcttgctca
gcctgcacctatgagaactggcccaagaccctaaggtgtgtagtgtgtgaccaccctaag
ccgagtgatgctgtgctgcaggagccacagcccgagagtaccatggccctgtctatagtg
aacgagcaggagaggacagcagggggagggggtgtggggggcagtaaaacggctcagagg
aggctttcgccccctgtgcctgctggccaggccgaagtgcagattgagctggcgtccggg
gcagtgggtgcccaagaagagcatgagacggactttaagaagctcaagcagatcaggaac
aggatgcggaggagtgactggctctttctcaatgcatgcgcaggtgtggtggagggtgat
ttggctgcagttgaagcctataagtcatcaggtggtgacatcgcacgtcagctgacctca
gacgaggtccgtctgctgaatcgtccatctgcgtttaacgctggcttcactctggtgcac
ctcgccatccgctttcagcgccaggacatgctctctgtgctcctcactgaggtcagccag
catgtgtctcagcaggcagctaagtgtattccagccatgatatgtccggaattaacagag
cagatacggcgggaggtggctgctgcactgcacaggcgtaaaggagagtttccctgttac
ttcttcactgatatcactacctttactcttccagcagatattgaagacctgcctcctaat
gtccaagagaagctctttgatgaggtgttggatcgagatgtacagaaagagcttgaagag
gaatctccaatcataaactggtctttggagctaggcacacgcctggacagccggttgtac
gctctgtggaaccgcactgcaggagactgccttctggactcagtgctgcaggccacatgg
ggcatctacgacaaagattctgtactgagaaagagtctgcacgacagcttacatgactgc
tcccactggttctacacccgctggaaggagtgggaatcgtggtattctcagagttttggc
ttgcacttctctttgagagaagaacagtggcaggaagactgggcttttattttatcactg
gccagtcagccgggggcaagtttagagcagactcatgtgtttgtgctggcccatatcctc
cgccggcccatcatcgtgtacggtgtgaaatattacaagagcttccgaggggagacgctg
ggatacacccgcttccagggtgtgtatctgcccctgttgtgggagccaagtttttgctgg
aagagccccatagcactgggctacacacgaggccacttctcagccctggtcgccatggag
aacgacggctatgacaaccgcggtgcaggtgctaatctaaatacggacgatgatgtcact
gtcacttttctgccattggtggacagcgacaggaagctgctgcatgtccacttcctgtct
gcacaagagatgggaacagaggagcagcaggagcgtctgctgaggcagtggctggactgt
tgtgtgacggagggtggagtcctggtggcgttgcagaagagctcgaggaggcggagccat
cctctcgtcacacagatggtggagaagtggttggatggctatcggcagctgggcacctgc
cctgccctctcagatggcgaggaagaggaggaggatgaagatgagtga
DBGET
integrated database retrieval system
