KEGG   Pangasianodon hypophthalmus (striped catfish): 113538710
Entry
113538710         CDS       T05759                                 
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
  KO
K08518  syntaxin-binding protein 5
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:phyp04131]
    113538710
Membrane trafficking [BR:phyp04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    113538710
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Tomosyn
    113538710
SSDB
Motif
Pfam: LLGL Beta-prop_THOC3 WDR55 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_1st ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd WD40_Prp19 WD40_WDHD1_1st Beta-prop_HPS5 WD40 Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_WDR5 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR3_2nd Beta-prop_VPS8 Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st Lgl_C EIF3I Synaptobrevin CFAP43_N
Other DBs
NCBI-GeneID: 113538710
NCBI-ProteinID: XP_026789798
LinkDB
Position
Unknown
AA seq 1189 aa
MKKFNIRKVLDGLTAVSSSSSSSSASAQPGNRENDLIQETLQSEHFQLCKTVRHGFPYQP
SAMAFDPVQKILAIGTQTGALRLFGRAGVECYCQHESGSAVIQLQFLINEGALVSGLADD
SIHLWNLRQKIPAILHSLKFTRERITFCHLPFQSKWLYIGTERGNIHIVNVESFTLSGYV
IMWNKAIELSSKTHPGPVVHISDNPMDEGKLLIGFECGIVVLWDLKSKKADYRYSYDEAI
HSVAWHHEGKQFVCSHSDGTLTTWNIRSPAKPAQITTPHGKQPKDGKKPEPCKPILKVEY
KTTRAGDPFMILSGGLSYDTVGRRACLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDYQ
EPYAVVALLEKDLVVIDLAQTGYPIFENPYPLTIHESPVTCCEYFADCPDELIPALYSVG
SRQKRQGYSKKEWPISGGNWGQGTQSYPEIIITGHADGSVKFWDASALMLQVLYKLKTAK
VFEKARNKEEKPSTDIVDEDPFAIQSLTWCPESRMLCVAGVSAHVIVYRFSKQEVTTEEV
QLLEVRMQCELNDVDSPDGAGDHASAVSTPGASSSPQSSAPQTHLSSSSNNSTEGLRDNV
PCLKVRSTPLKQSPGYQVELVIQLVWVSGEPPQQITSLAVNSAYGLVVFGNGNGLVVVDY
LQKTLLLNVSTAELYGSSDPHQRQPRSPRKARQPSGGLCDGHDGSTALEDRCKSPTSGCV
SSDSPCHSDEDSKLNFFERVKSKSRLLSKSVANDFAKMSWKFSLAADQKQDGTIQRQCSL
PNKKRVCNEKEEVFRRKATSIHRTHSVPDSNAKDNSFSRSRSSSVTSIDKESREVISSLH
FCDSLSRKSDVAASPSLWVGTSVGTMLGISFNVPSTPEQRLQQTVGVSFCGSVVRLKGGI
LHMALMDSSGSLQPSASECWYDLNAPEEEREKTRRRRPASPPSSQENQDTYYAVVCSEKQ
AKVVALPSQNCIFEHNITETSYVLRADVVVMPAGICIACFCANGHIMTLSLPSLRPLLDV
NYLPLTDMRIARTFCFSNLGQALYLTSPTEIQRITYSQETCDNLQEMLGELFTPVETPEA
PNRGFFKGLFGGGAQSLDREDLFGELAAGKASRSLAQHIPGPGSMEGMKGAASGVVGELA
RARIALDERGQKLSELEERSAAMMASADSFSKHAHDVMLKYKDKKWYQL
NT seq 3570 nt   +upstreamnt  +downstreamnt
atgaagaagtttaatatcagaaaggtgttggacggcttgactgcggtttcctcctcctcc
tcttcctcatccgcatcagctcagccggggaacagggaaaacgacctgattcaggagacc
ctgcagtccgagcattttcagctctgcaagacagtacgacatggctttccttatcaaccc
tcagccatggcttttgaccctgtgcaaaaaatactggcaattgggacacagactggagca
ttaagactctttggccgtgccggtgtagagtgttactgccagcatgagagtggctcggct
gtcatccagctgcagtttctcatcaatgagggggcactggtgagtggtttggctgatgac
agcattcatttatggaatctgaggcaaaaaatcccagctattctccactcccttaaattc
accagggagaggatcacgttttgccatctgcccttccagagtaaatggctttacatcgga
acagaaagagggaacattcacattgtcaatgtggagtccttcactctctcaggctatgtc
atcatgtggaacaaagccattgaactctcttcaaaaacccaccctggtcctgtggtacac
atcagtgataatcctatggatgagggaaagcttttgattggttttgaatgtggtattgtt
gtgctgtgggacttgaaatcaaagaaagctgactaccgctacagctatgatgaggcgatc
cactcagtggcctggcaccatgaagggaaacagtttgtgtgcagtcattcagatggtaca
cttaccacatggaatatacgctctcctgccaagccggcacagatcactacgccacatggc
aagcagcctaaggatggaaaaaagcctgagccatgcaaacccattctgaaagtggaatac
aaaacaactagagctggggatccttttatgatactgtctggaggtctttcatatgataca
gtgggacgcagggcctgcctgactgtaatgcatggaaaaagcactgctgtactggagatg
gactatcccattgtggatttcctaactctgtgtgaaactccctatccgaatgattatcaa
gagccttatgctgtagtggccctgctggagaaggatttagtagttattgacctcgcacaa
actgggtaccctatctttgaaaacccatatcctctgactatccacgagtccccagtgacc
tgctgcgaatactttgctgactgtcctgatgaactcatccctgcactttactctgtggga
tccaggcaaaagagacagggctacagtaaaaaggaatggcctataagtggtggtaattgg
ggccagggcacacaaagctatccagagatcattatcacaggacatgctgatggatcagtc
aaattttgggatgcttctgcattaatgctgcaggtgctgtacaagctgaaaacagccaag
gtgtttgaaaaagcccgtaacaaggaggagaagcccagcactgacatagtggatgaggac
ccttttgccatccagagtctgacctggtgcccagagagccgtatgttgtgtgtggctgga
gtttctgctcatgtcattgtttaccggttcagcaaacaggaagtaaccacagaggaggtt
cagctgttggaggtgaggatgcagtgtgagctgaatgatgtagactctccggatggtgca
ggggaccacgcatcggctgtatccacaccgggagcttcatccagccctcagtccagcgca
ccacaaacacacctatcctccagcagcaacaactccaccgaaggcctgcgtgataacgta
ccctgcctcaaggtgaggagcactccgctcaagcagtctccaggctaccaggtggaactg
gtcattcagctggtgtgggtcagcggggagccaccacagcagatcacaagcctggctgtc
aactctgcctatggcctagtggtttttggtaatgggaacggcctggtggtggtggattat
ctccagaagactctgctgctcaatgtgagcacagcagaactttacggctcctctgatccc
caccagagacagccacgctctccccgcaaagccagacagccctctggaggtctctgtgat
ggccatgatggttctactgccttagaagaccggtgcaaatctcctacatcaggctgcgta
agctctgactccccctgccattctgatgaagacagcaaactaaatttctttgaaagggtg
aagtcgaaaagcagactgttatcaaagagtgttgccaatgactttgctaagatgtcatgg
aaatttagcttggctgctgatcagaaacaagatgggactatacagcggcagtgctctctc
cctaataagaaacgtgtgtgtaatgagaaggaggaagtgttcagaagaaaagcaacatct
attcacaggactcactctgtgcctgattccaatgccaaggacaactccttcagccgctcg
cgcagctccagcgtgaccagtattgacaaagagtcacgcgaggtcatctcttctttgcat
ttttgcgactccctgtccaggaagagtgatgtggcagcatcccccagcctttgggtgggc
acctctgtgggcactatgctgggtatctccttcaatgtgccctccacccctgagcagagg
ctgcaacaaacagtaggcgtctccttctgtggctcagtagttcggttgaaaggaggcatt
ttgcacatggcattgatggactcaagtggctctctacagccttctgcctctgagtgctgg
tatgacctcaacgcccctgaggaggagagggaaaagacgcggcggcgccggcctgcctca
cccccttcttctcaggagaaccaagacacctactacgctgtggtctgttctgagaaacag
gccaaagtggtggccctgccctcacagaactgcatctttgaacacaacataactgagacc
tcgtatgtgctgagggccgacgttgtggtcatgcctgctggaatctgcatcgcctgcttc
tgtgccaacgggcatatcatgactctgagtttgcccagcctgcggccgctactagatgta
aactatctgcctctgacggacatgcggatagcccgaacgttctgcttctccaacctgggc
caggctctgtatctcacctcccctacagagatccagagaatcacctacagtcaggaaacc
tgcgacaacttacaggaaatgctgggagagctgttcactccagtcgagacaccagaggct
cctaacagaggcttttttaaaggtctttttggaggcggggcccaatccctggatagagag
gatctctttggagaactggcggcagggaaggcctcacgcagccttgcccagcacattcca
gggccaggtagcatggagggcatgaaaggggcagcatcaggagtggtgggcgagctggca
cgtgcccggatagctctagatgagagaggacagaagctcagtgagctggaggagaggtct
gcagccatgatggccagcgcagactcattttcaaagcatgcacatgatgtgatgttgaag
tacaaggataagaagtggtatcagctctga

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