Pangasianodon hypophthalmus (striped catfish): 113538722
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Entry
113538722 CDS
T05759
Symbol
trappc12
Name
(RefSeq) trafficking protein particle complex subunit 12
KO
K20309
trafficking protein particle complex subunit 12
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113538722 (trappc12)
Membrane trafficking [BR:
phyp04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
113538722 (trappc12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_19
TPR_6
TPR_17
TPR_16
TPR_8
ANAPC3
TPR_14
TPR_11
TPR_9
Paf67
ARM_TT21_2nd
Coatomer_E
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
113538722
NCBI-ProteinID:
XP_026789826
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MDSGEDAAQRPSTLDLAGLEKDVPAVQAPSDAAAMSSHPDTTDALFQEESIDLDVEAFIS
PQDDSNASVSVTDKLNDQMMESVMISDSPNSEEEDVPIDSLLEQTDDKESLDSKEPEEDE
ENDPKEEKEEAGTEQATPDDTVESEMSPALAEKEKTEENDKDSTKEAVTGTVPAPSSPKA
EETELEIAKHVIKDEPIPVCTIFSQAMQNKAQSLVPDGFQPTLVKSPSFTTGHNETPNKL
VPLVSQPSPSLSKFFTDNGTVNPASDFFDSFTTSSSFISVSNPNAETPKSPAPPERQLSS
GSSSLLQDGGTASTYFSPAPPESTPRPVTGPAEPVVTISKLQAVFSGSDDPFASALSMSE
VDRRYDAWLPSEETRRVLISVATQQVNPVHVDRERLSMPGLKFDNLQGDAVKDLMLRFLG
DQAATKRQVLTANSVEQNFLGLKQLIGTKNWRAAVDLTGRLLTAHGQGYGKSGQPSTHTT
DTLQLWFVRLALLVKLNLFQNAELEFEPFGNLDQPDLYYEYYPTVYPGRRGSMVPFSMRV
LHAELPQYLNKPQESLDRLHSMRSICQKILANLEEGLAEDGSMMTLTQENRQASIQLWRS
RLCRVMYSMANCLLMMKDYVLAVETYYSIIQYEPQQRVQLLSGIGRIFLQIGDIRTAEKY
FQEVEKAGEEKVKGPTHDTAILMNRAFVYLSQNNYADAHTCFSSVLKIDPNNPVANNNAA
VCLLYLGRLKESLGQLESLVQQDPALYLHESVLFNLTTMYELESSRSTQKKQALLEAVAG
REGDSFNTQCLKLV
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggatagtggtgaggatgcagctcaaaggccttcgactctagatctagccggactagag
aaagacgttccggcagtccaagcaccttcagacgccgccgctatgagcagtcaccccgac
actacagacgctctcttccaagaggagagcattgacctggacgtagaagcgttcatctcc
cctcaggatgacagcaatgcttctgtgagcgtcacggataagctgaacgatcagatgatg
gagagcgtcatgatctccgattcccccaacagtgaagaggaagatgttcctattgactct
ctgttagagcaaacagatgacaaggagtcccttgactccaaagagcctgaagaagatgaa
gagaatgacccaaaagaggagaaggaggaggctggaactgaacaggccacacctgatgat
actgttgaatctgaaatgtctccagctttagctgaaaaggagaaaacagaggaaaatgat
aaggacagcacaaaggaggctgttacaggcacggtgcctgctccaagcagccccaaagct
gaggaaacggagcttgaaatagccaagcatgtgattaaagacgagcccattccagtgtgc
actattttcagccaagccatgcagaataaagcacagtccctggtgcctgatggatttcag
ccgactttggtcaaatccccgagctttacaactggccataatgaaactcccaataaacta
gtgcctctggtatctcagcccagtcccagtctcagtaaattcttcactgataatggcact
gttaaccccgcctcagacttctttgactccttcacaacatcctcatctttcatttcagtt
agcaacccaaacgcagagacaccgaagtccccagcccctcctgagcgccagctttcttca
ggctcaagcagccttcttcaagatggaggcacagccagtacttacttcagtccggctcct
cccgagagcacaccgaggcctgtgacaggccctgcagaacctgtagtgactattagtaag
ctgcaagcggtattctcaggcagcgatgatccgtttgcgagtgctctgagtatgagcgaa
gtggacagacgatatgacgcctggcttccctctgaggagaccaggagagttctgatctct
gtggccactcagcaggtcaaccctgtgcatgtagatagggagaggctatccatgcccgga
ctcaagtttgacaatttgcagggtgatgcagtgaaggacctgatgctgcgtttccttgga
gaccaggcagcgacgaagaggcaagttctcactgctaactcagtggagcagaacttcttg
ggtctcaagcagctgatcggcacaaagaactggagggcagctgtggacctgacgggcaga
ctgctgacggctcacggccaaggctatggcaagagcggccagccgagcacccacaccacc
gacacgctgcagttatggtttgtgcgtctggctctgttggttaagctcaacctcttccaa
aatgccgagctggagtttgagccgtttggtaatctggaccagccggacctttactacgag
tactaccctacagtgtaccctggaagacgaggttcgatggtaccgttctccatgcgtgtg
ctgcatgctgaactgcctcagtacttaaacaagccccaggagtctctggaccgcttgcac
agcatgagaagcatctgtcagaaaatcctggctaacctggaggaaggactggctgaggac
gggagcatgatgactctcactcaggaaaacagacaagcctctattcagctgtggaggtca
cgtctgtgccgggtgatgtactccatggcaaactgtctgctaatgatgaaggactatgtg
ctggctgttgagacatattactccatcatccagtatgagccacagcagagagtgcagctg
ttgagtggaataggacgcatcttcctacagattggagacatcagaactgcagagaagtat
ttccaggaagtagagaaagctggtgaggaaaaagtaaaaggaccaactcatgacacggct
attttaatgaacagggcatttgtgtacctgagccagaataattatgcagacgcccacacg
tgtttctccagcgtcttgaaaattgatcccaacaatcctgtggcgaacaacaacgcagca
gtgtgcttactttatttgggccgcctaaaggagtctctgggtcagctggagagcctggtg
cagcaggaccctgcgctctacctgcatgagagcgtgctcttcaacctgaccaccatgtac
gagctggaatcatcacgcagcacgcagaagaaacaggctctgctggaggctgtggccggg
cgcgagggcgacagcttcaacacgcagtgcctcaaactggtgtaa
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