Pangasianodon hypophthalmus (striped catfish): 113538726
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Entry
113538726 CDS
T05759
Symbol
fignl1
Name
(RefSeq) fidgetin-like protein 1
KO
K22766
fidgetin-like protein 1 [EC:5.6.2.-]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113538726 (fignl1)
03400 DNA repair and recombination proteins [BR:
phyp03400
]
113538726 (fignl1)
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
113538726 (fignl1)
DNA repair and recombination proteins [BR:
phyp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
113538726 (fignl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
AAA_22
AAA_16
TIP49
IstB_IS21
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
113538726
NCBI-ProteinID:
XP_026789841
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MSSAHLDEWQKRSFDISSGTYTPEQTADAYRAHILSIQYAWANAELSPAGAASLFRTYTE
RYAAVLDSDDQRTGLNNYADSALHLARNQRNHSDKWESSLTVENVFTLPFVQRMMKSRVD
DNSLLVDPAVADIIVGGEVSQSCGKGMIESSAAGGCKPEHPSPSSMSHISAGVESTAGNL
VSGAAERTRSKENGLPSAHNAPRAPAGVTPLLVHNTRNSPTNPGSFPPSSFASTSMSSAN
NYHSVFYSSTNPSKRKNFYSSGTESNRSSFLPQGGHEVGDSSRRREEFPGTNFKTAREQL
IVDQQKKYSHQGQRGPSAPVGTVTKKSLGANRSRGAFSKFVSPMPRQEEGSNTRDDPTQD
VQPVDERLKNFEPKIIELIMSEIMDHGPPVAWEDIAGLEFAKATIKEIVVWPMLRPDIFT
GLRGPPKGILLFGPPGTGKTLIGKCIACQSGATFFSISASSLTSKWVGEGEKMVRALFAI
ARCHQPAVIFIDEIDSLLSQRTDGEHDSSRRIKTEFLVQLDGAATSSEDRILVVGATNRP
QEIDEAARRRLAKRLYIPLPEAAARQQIVTNLMSREKSQLRTDELEKVVSSTEGFSGADM
TQLCREAALGPIRSIQLSDIATITPEQVRPILYCDFQEALKTVRPSVSTKDLELYEDWNK
TFGCGR
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgcacacctggacgagtggcagaagaggtcctttgacatttcgtctggcaca
tatacacctgaacagacggctgacgcttatcgggcgcacattctgtccattcagtatgca
tgggcgaatgccgagctctctccagccggagctgccagcctgttcaggacctacactgag
cgctacgcagcagtcctggactcagacgaccagcgcacagggctgaataactacgccgac
agtgccctgcacctggcccgcaatcagagaaaccacagtgacaaatgggaatcgtcatta
acagtagaaaatgtgttcaccctgccgttcgtgcagagaatgatgaagagtagggtggat
gacaacagtctgcttgtggatcccgcagttgctgacattattgttggtggggaagtcagc
cagagttgtggtaaaggtatgattgagtctagtgctgctggtggatgtaaacctgagcat
ccttcaccctcatctatgagtcatatcagtgctggggtagagagtacagcaggtaacttg
gtcagtggtgctgcagagaggacgagaagcaaagaaaatggtcttccttcagcccataat
gcccctagagcaccagcaggggtaactccactcttggttcataacactcgtaattcccct
accaaccctggctcttttcctccttcaagttttgctagcacaagcatgtccagtgcgaac
aattaccattctgtgttctactcctccacaaatccctctaagaggaagaacttctacagt
tcaggaactgaaagcaacagaagctcattcctgccacagggaggtcatgaagttggagat
agtagtcggagaagagaggagtttcctggcactaactttaaaacggcacgagagcagctt
attgttgaccagcagaaaaaatattcccatcagggccagcggggtccatcagctcctgtt
ggtacagtaaccaaaaaatctctgggggcaaacaggtcacggggggccttctccaaattt
gtctcaccaatgccaaggcaggaggagggaagcaacaccagggatgacccaacacaagac
gttcagcctgttgatgaacgactaaagaactttgaacctaaaataattgaactgattatg
agcgaaattatggaccacggcccacctgtggcttgggaggatattgctggccttgagttt
gccaaagctaccattaaggaaattgtagtgtggcccatgctcaggcctgacatttttaca
ggtctcagaggtccgcctaagggaattctcttgtttggtcctccaggtactgggaaaaca
ctcatagggaagtgcatagcctgtcagtctggtgccacgtttttcagcattagtgcatca
tcactcacctctaagtgggtgggagaaggagagaagatggttagagctctgtttgccatc
gcccggtgccatcagccagcggtcatttttatcgatgagattgactcccttctttctcag
cgcacggatggagaacatgactcatctcgccggattaagactgagtttcttgtccagctt
gatggtgctgcaacctcctctgaggatcgaatattggtggtgggggccaccaaccggccg
caggagattgatgaagcagcccggcgtcgcctggccaagcgactctacatcccccttcca
gaggctgccgctcgtcagcagatagtgaccaacctaatgtcacgggagaagagccagttg
agaactgatgagcttgagaaagtggtgtcaagcacagagggtttctcaggggctgatatg
acacaactgtgccgtgaagcagcacttggcccgatccgcagcatccagctgagtgacatt
gccaccatcacacctgagcaggtgcgacctatactttactgtgacttccaggaggctctt
aagactgtacggcccagtgtgtctaccaaagatctggagctctatgaagactggaacaag
acttttggctgtggtagataa
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