Pangasianodon hypophthalmus (striped catfish): 113538734
Help
Entry
113538734 CDS
T05759
Name
(RefSeq) calpain-3-like
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113538734
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phyp01002
]
113538734
Enzymes [BR:
phyp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
113538734
Peptidases and inhibitors [BR:
phyp01002
]
Cysteine peptidases
Family C2: calpain family
113538734
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
EF-hand_5
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
113538734
NCBI-ProteinID:
XP_026789852
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MPYTPSGFFCDRLIRERERKDGEGSVNKPLQFSGQDFNALKQDCLKKKVLFEDDTFPANV
ESLGYKELGPKSNKVKNIVWKRPKDICDNPQFIVGGASRTDICQGDLGDCWLLAAIACLT
LNDKLLYRVVPQEQSFSDNYAGIFHFQFWRYGDWVDVVVDDRIPTINNQLVFTKSAERNE
FWSVLLEKAYAKLHGSYEALKGGNTAEGMEDFTGGVTEFYEMKEAPKDLYKIMKKALERG
SLMGCSIDALVPARLETRTTTGLVKGHAYSVTAVEECKQSAQKESKVRLVRLRNPWGQVE
WNGPWSDNSKEWATISKKEKENLHLQNAEDGEFWMSFADFTKNYTKLEICNLTPDALDDD
KLHKWTVSVNEGRWVKGCSAGGCRNYTDTFWTNPQYRLRLLEEDDDPDNSEVACSFVVAL
MQKNRRKERKLGANLFTIGFSIYEVPKEMHGNKQHMQKEFFLLNSTKARCKAYINLREVT
QRFRLSPGEYVIVPSTYEPHQEGEFLLRVFSEKKNISEEIENRIEADHPVPAPASAGEET
EEDQQFRTIFQQIAGDEMEISANELRNVLNKVLAEHRDMNKEGFSLESCRSMIAFMDMDG
TGRLNLQELRQLWNKIKQWQEIFKHYEAEHTGFISSYEMRNAINDAGFRLNNPLYNIITM
RYANENMNIDFDSFVSCLVRLEGMFRAFQAFDQDGDGTISLSVLEWLQLTLYA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgccctacacaccatcaggctttttttgtgaccggctgatccgggagagagagagaaag
gatggagaaggatctgtgaacaaacctcttcaattcagtggccaggactttaatgccctg
aaacaggattgtcttaagaaaaaggtgctgtttgaggatgataccttcccagccaatgtg
gagtccctgggttacaaggaactgggccccaagtccaacaaggtcaagaacattgtctgg
aaaagacccaaggatatttgtgataatccacagttcatcgttggaggtgccagcagaaca
gacatctgtcagggagacttgggagactgctggctgcttgctgccattgcttgtcttacg
ctgaacgataagctactgtatcgggttgttcctcaagagcagagtttctctgacaattat
gcgggaatctttcattttcagttctggcgttacggtgactgggtggatgttgtggttgat
gatcggatccctaccatcaataaccagctggtgttcaccaaatctgctgagaggaatgag
ttctggagcgtacttcttgagaaagcgtatgccaaactgcatggttcttatgaggctctg
aaaggtggaaacactgccgaggggatggaagacttcactggaggagtaactgagttttat
gaaatgaaggaggcacccaaagacctttacaagatcatgaagaaggccttggagcgaggc
tcccttatgggttgctctattgatgccttggtcccagcccgcttggagactcgcaccacg
actgggctagtgaaaggtcatgcctattctgtaactgctgtggaggagtgtaaacagagc
gcacaaaaagaatctaaagtgcgtctggtgcgtctccgtaatccgtggggccaagtggag
tggaatggaccttggagtgataattcaaaggagtgggctaccatttctaagaaagagaaa
gaaaacctgcatctacagaatgcagaagatggagagttctggatgtcctttgctgatttc
acgaagaactacaccaagctggaaatctgtaacctgacccctgatgctctggatgatgat
aagctccacaagtggacagtgtctgtgaatgaggggcgctgggtaaaaggctgctctgct
ggaggctgcaggaattatactgacaccttttggacaaacccacagtatcgccttcgcctc
cttgaggaggatgacgacccggacaacagtgaggtggcctgctcctttgtggtggctctc
atgcagaaaaacagaagaaaagaacgcaaactgggtgccaatttattcactattggattt
tccatctatgaggtgccaaaggagatgcatggtaacaagcagcacatgcagaaggaattc
ttcctgctgaactcaaccaaggctcgctgcaaggcctacattaacttgcgggaggtgact
caacgcttcaggctgagccctggggagtatgtcattgtgccttccacctatgagccccac
caggaaggcgagtttctcctccgtgtcttctctgaaaagaagaacatctctgaggaaata
gagaacaggatcgaagctgaccatccagtgccagctccagcctcagcaggggaagagact
gaggaggaccagcagttccgtaccatttttcagcagatagctggggatgaaatggagatc
tcagccaacgagctgagaaatgtcctgaacaaggtgttggctgagcacagggacatgaat
aaagagggcttcagtctagagagctgccgtagcatgattgccttcatggatatggatgga
acaggcagacttaatctacaagagcttagacagttgtggaataagatcaaacagtggcag
gaaatttttaagcactatgaagctgagcatactggcttcatcagcagctatgagatgaga
aatgccatcaatgatgcagggttccgtctcaacaacccactgtacaacattatcacaatg
cgttacgccaatgagaacatgaacatcgactttgacagctttgttagctgtcttgtgcgt
ttggaggggatgttcagagctttccaggcctttgatcaggatggagatggcactatcagt
ctgtctgtactggagtggctccagttgactctgtatgcctaa
DBGET
integrated database retrieval system
