Pangasianodon hypophthalmus (striped catfish): 113538749
Help
Entry
113538749 CDS
T05759
Symbol
tulp4
Name
(RefSeq) LOW QUALITY PROTEIN: tubby-related protein 4
KO
K24720
tubby-related protein 4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
113538749 (tulp4)
Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
Other domain-containing proteins
Tubby family proteins
113538749 (tulp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_CDC20-Fz
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
113538749
NCBI-ProteinID:
XP_026789886
LinkDB
All DBs
Position
Unknown
AA seq
1813 aa
AA seq
DB search
MSRDYEEPGNSVGMLAAVEHGPVLCSDSNILCLSWKGRVPKSEKEKPVCRRRYYEEGWLA
TGNARGVVGVTFTSSHCRRDRSTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDMEGGIF
VWIQYEGRWSVELVNDRGAQVSDFTWSHDGTQALIAYRDGFVLVGSVSGQRHWSSEINLE
SQITCGIWTPDDQQVLFGTADGQVIVMDCHGRMLAHVLLHESDGIVGMSWNCPDFLVEDS
TESDTDSDDNTSSQARNVKPLLTVSFISGDISLMNNYDDLSPNIIHSGLKDVEVQWCSQG
DLLAVAGMERHGLPSDSACSSMMRNALVKFYNVQGEHIYTLETPAQRPITTICWGHRDSR
LFLACGPALYVVRVEHRVASLQLLCQQGIASALREERDVSKLNMPSLLCSYVTSAFIPTI
KPPIPDPNNIRDFVSYPTAGNERLHCTMKRAEENPEAGGPCYTLYLEHLGGLVPILKGRR
ISKLRPEFVIMDPKMDSKTDEVCVNGMLSYMTDSCNCSDSSDIELSDEWVERKSPKLSRG
NRSPKLPRINMESRKSPKLVQTSQELSRSPRLPKKATIRSPSLTRREFPVDGISEHNYLA
QVTSNIWGTKFKIVGLASFLPANLGAVIYKTSLLHLQPRQMTIYLPEVRKISLDFMSLPV
FNPNVFSEDEDDLPVMGPSGVSGDNPPCTVNIPIAPIHSPAQAMSPTQSIGLVQSLLANQ
NIQLDVLTNPTATAAAAAAAAAAAAKAAVPDHSADNVTAQYTVPARYSSPGQVIFSGLEM
GNLSLSGTLPPPPHHLPPQPHQQQRQQQQQQEDHHQTSKHQQQTQTQQQHLKLQQHQQAQ
QQHQQSMQHHQQHLQHQQQMQTQHHQQIQQHIQQQHQQQMQQHHHQIQQQQLQQHHQQMQ
QQQLQQQIHQQQVQHHHQQMQQQQHQMHLQQEQMQQQQQQIRQQIQEMRQQQQQLQQQHQ
QMQQQHQQMQRQHQQMQQQLKMQISLPPPPSGYAPISMHQLQMMPAIPHPDQPPDRAEQT
HTLKVPSRPQSFIENDNSLEIQMRKMNPPPPYPGTVVSAAAAGPPVQPGLIGNSENANAL
SADSCLSKDEFSLHPVTIQYPTPLGYERITTFDSSGNVEEVCRPRRRLIRNQNAYGLQGM
GSSATLKVTSSENKKVQLPYSSATLSRLSVPRYSIPSGDPPPYPDPANQINVNRSPTQRI
DSSLIHATLRRDRRENALKVPQMVDTARTLPTKSKVNSALALSYQPRIPTALYTCTQCSS
NSSSTSVSVSGGGSNSSGIAGGTVVRQDFPPGKGAQHSTIIVHSKSASTLASQSSYNLLS
PVDNSRDRTVYINSAFTEDETLNQQCHLEKSMRHLTLGDVSLTVKRPPPYQWDSPASDQI
WMAQDQNMLTSPPGPHKPPHLLLSQAQHLDITRLPFVLSTKPPASPSSMTLPSAYQISLS
PFPPGVGHSGPQFQSLQSTPQPCGPNDMVTTIPFSQQDPALVLPPGYTNNLANLPCCPLP
PMYPGASSCANLQLHPMALHPWSTYSACPPMQDHSATLPSKMHQSXXXXXXXXXXXXXXX
XXXXXMAHQSTSEVLADSSESFQEQSSLNESPVQQGSDRFSKKSRKRLDSRAEEAGMSTV
SESKSKKEGRALADFNSLIASPRLGGREKKKPKGQKEQLNKAKKLSRTTNEFQDSSESEP
ELFISGDELMNQSQSSKKGWKSKRSLRTANELEEIKCRKANEREDRSLGSQGFVYVMANK
QPLWNEATQVYQLDFGGRVTQESAKNFQIELDGRQVMQFGRIDGNAYILDFQYPFSAVQA
FAVALANVTQRLK
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atgtccagggactatgaagagcctggcaattcagtagggatgttggcagcagtggaacat
ggtcctgtcctctgcagtgactccaacatcctctgcctctcatggaaaggaagggttccc
aaaagtgagaaggaaaagccggtgtgcaggagacgctactatgaggaaggctggctggcc
accggaaatgcgaggggcgttgttggagtgactttcacttccagtcactgcaggagggac
aggagtactccacagagaattaacttcaatttaagaggccacaacagtgaggttgtcctt
gtccgctggaatgagccgtttcaaaagcttgctacatgtgacatggaaggggggatattt
gtgtggatacagtatgaagggcgatggtctgtggagctggttaatgatcggggagctcag
gtaagtgactttacctggtcccatgatggaacccaggccctgattgcctacagagatggc
tttgtcttggtgggctcagtcagtgggcagaggcactggtcatctgagatcaaccttgag
agtcaaatcacctgtggaatatggacccctgatgaccaacaggtgttgtttggaacagca
gatgggcaagttattgtaatggactgtcatggtcggatgcttgctcatgttctgctacat
gagtcagatggcattgtgggcatgtcctggaactgccctgacttcctggtggaagacagc
actgagagtgatacagactctgatgataatacctcaagtcaagcacgtaatgtgaagccc
cttctcacagtaagcttcatatctggagacataagtctaatgaacaactatgatgacctt
tcccctaacattatccactcaggactaaaagatgtggaggtgcagtggtgctctcaggga
gacttgttagctgtagctggaatggagagacacgggctgccttctgactcagcctgttcc
tccatgatgagaaatgccctagtcaagttctacaatgtccaaggagaacatatatatact
ttggaaacacctgcgcagaggcccatcactactatatgctggggccacagggactcacgg
ttgtttctggcctgtgggccagcactgtatgttgtacgggttgagcacagggtggccagc
ctccaactgctgtgtcagcagggcatagccagtgccctaagagaggagagagacgtgagc
aaactgaacatgccatctctcctctgttcctacgttaccagtgcattcataccaaccatc
aagcctcctattcctgatccaaacaacattcgtgactttgttagctaccccacagcggga
aatgagagattgcactgtacaatgaagcgtgccgaagagaatccagaggcgggagggccg
tgctacaccctctatttggagcacttggggggtctggtgcctatccttaaaggccgtcgt
atcagcaagctacgtccagagtttgttataatggaccccaaaatggacagtaagacagat
gaggtctgcgtgaatggtatgttatcctacatgactgacagctgcaactgctctgactct
agtgacattgaattgagtgatgaatgggtcgaaaggaagtcacctaaactttctagagga
aacaggtctcctaaacttccaagaatcaatatggaatcaaggaagtctcccaaacttgtc
caaacatcccaagaattgtccaggtctccaagattaccaaagaaagctactatacgatct
ccaagtctcactcgcagggagtttccagtagatggaataagtgagcataattatctggct
caagtcacctccaacatttggggtacaaaatttaagattgtgggacttgcttcttttttg
ccagcaaatttgggtgcagttatctacaaaaccagtttgttgcacttgcaaccacgtcag
atgacaatctatctaccagaggtccgtaaaatttcccttgacttcatgagtctaccagtc
ttcaatcccaatgtgtttagcgaagatgaagatgatttaccagtcatgggcccttcaggg
gtgtcaggtgataatcctccctgcacagttaatattcccattgctcctatacatagtcct
gctcaagccatgtcgcccacacagagcataggacttgtgcagtctctcttagcaaatcaa
aatattcagcttgatgttctgaccaatcccacggccacagcagctgcagctgctgctgca
gcagcagcagcagcaaaggcagcagttcctgatcatagtgcagacaatgtgacagcacag
tacactgtgccagcaagatactctagtcctggacaggttatctttagtggccttgaaatg
ggtaacctgagtttgagtggaacactcccaccaccaccacatcatttgccaccacaacct
catcaacagcaacgtcagcagcaacagcaacaagaagatcatcatcaaacatcaaaacat
cagcagcagacacaaacacagcagcagcatctgaagttacaacagcaccagcaagcacag
caacagcaccaacaatcaatgcaacatcatcaacagcacctgcagcaccaacaacaaatg
caaacccagcatcatcagcaaattcaacagcacatacaacagcagcaccaacagcaaatg
caacagcatcatcatcaaatacagcagcagcaactacagcaacatcatcagcaaatgcaa
cagcagcaattgcaacagcaaatacatcagcagcaagtccaacaccaccatcagcaaatg
caacagcagcagcatcagatgcacctccagcaagagcaaatgcagcagcagcaacaacaa
attcgacaacagattcaagaaatgagacagcagcagcaacagcttcagcaacagcatcag
caaatgcagcagcaacatcaacagatgcaaagacagcatcaacaaatgcagcaacagctc
aagatgcaaatatccttaccgcctcctccttcagggtatgcccctatttccatgcatcag
ctccagatgatgcctgcgattcctcacccagaccaaccaccagacagagcagagcaaaca
cacactctgaaagtcccttctagaccacagtcttttattgaaaatgacaactctcttgaa
attcaaatgcgtaaaatgaatcctccaccgccataccctggcacagtggtatctgcagca
gcagcaggtcccccagtccagccaggtctaattggtaacagtgagaatgctaacgcactg
tcagcagactcgtgcctatctaaggatgagttctctcttcacccagtgaccatccagtac
ccgacacctcttggttatgaaaggataacaacttttgacagcagtggaaatgtggaggag
gtgtgtcgcccacggagacgtcttatacgaaaccagaatgcctatggcttgcaaggaatg
ggaagttcggctacattgaaagttacttcatctgaaaataagaaggtccagcttccttat
agctcagcaactctcagtcgcctttcagtgcctcgatattccataccaagtggagatcct
ccaccatacccagaccctgctaatcagatcaacgtcaataggagtcctacacaaaggatt
gacagcagtcttatccatgctactctgcgacgggatcgcagagaaaatgctctgaaggtt
cctcaaatggtggatacagcaaggactctaccaaccaaatctaaagttaatagtgccctt
gcactttcttaccagcccaggatccccacagctttgtacacgtgcacacaatgcagcagt
aacagcagcagcacaagtgtaagtgtcagtggtggtggaagcaacagcagcggcattgca
gggggcaccgttgtgcgtcaagattttccccctggcaaaggggcacaacacagtaccata
attgtgcactctaaaagtgcttcaactctggcttcacaatcctcttacaacctactgagc
cctgttgacaatagtagagacaggactgtatacatcaactctgcctttactgaagatgag
actctaaaccagcagtgccacttggaaaaatcaatgcgccatttaactctcggagatgtc
agtttaacagtgaagcggccaccaccttaccagtgggattctcctgcttcagaccaaata
tggatggcccaggatcaaaatatgctgactagcccaccgggacctcacaaaccgccccat
cttttactcagccaagcacagcacttagacataactcgactaccttttgttctctcaaca
aaacctccagctagtcccagttctatgaccctgccatcagcttatcagatttccctttca
ccttttccccctggcgtgggccacagtggtcctcagtttcagtcattgcaaagtactcca
cagccatgcggccccaatgatatggtaacaacaattccatttagccaacaggatccagct
cttgttttgccccctggttatacaaataatctggccaatctgccctgttgcccactccca
cccatgtatcctggggccagctcatgcgccaaccttcagcttcatccaatggccttacat
ccatggagcacgtatagtgcttgccctcccatgcaggaccactcagcaactttaccaagt
aaaatgcatcagagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnctatggctcaccaaagcacctcagaggttttagctgactctagtgag
agttttcaggaacagtcctcacttaatgagagtccagtacaacagggctcagacaggttc
agcaaaaaaagtcgcaagagactcgacagcagggcagaggaggcaggcatgtccactgtt
tctgagagtaaatcaaaaaaggaaggccgtgctctggccgacttcaattctcttattgct
agcccaaggcttggtggcagggagaaaaagaagcctaaaggacagaaggagcaactgaac
aaggccaaaaagctgagcaggaccacaaatgagttccaagacagctctgaaagtgagcct
gagcttttcattagtggtgatgaactaatgaatcaaagccagagcagcaagaaaggttgg
aagagcaaacgcagcctgcgcacagcaaacgaactggaggagattaagtgccgcaaggca
aatgaaagagaagatcggagccttggcagtcagggctttgtgtatgtcatggccaacaaa
cagccattgtggaatgaagccacccaagtctaccagcttgactttggtggaagagtgaca
caggaatcagccaaaaattttcagattgagctggatggacgacaagtgatgcagtttggc
agaatcgatggtaatgcatacatcctggattttcagtatccattctcagctgtgcaagca
tttgctgtcgcgttggccaatgtcactcagaggcttaaataa
DBGET
integrated database retrieval system
