Pangasianodon hypophthalmus (striped catfish): 113538772
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Entry
113538772 CDS
T05759
Symbol
srp54
Name
(RefSeq) signal recognition particle 54 kDa protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03060
Protein export
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
113538772 (srp54)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
phyp02044
]
113538772 (srp54)
Enzymes [BR:
phyp01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
113538772 (srp54)
Secretion system [BR:
phyp02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
113538772 (srp54)
Eukaryotic Sec-SRP protein
113538772 (srp54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
cobW
nSTAND3
ResIII
DUF2209
AAA_33
SRPRB
NPHP3_N
AAA_17
AAA_22
nSTAND_NTPase5
AAA
MobB
APS_kinase
AAA_19
AAA_30
PduV-EutP
MeaB
nSTAND_NTPase7
6PF2K
Thymidylate_kin
AAA_31
Zeta_toxin
AAA_16
ATP_bind_1
AAA_18
Motif
Other DBs
NCBI-GeneID:
113538772
NCBI-ProteinID:
XP_026789946
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MVLADLGRKITAALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKAAI
DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKSWTPTKGKNNIIMFVGLQGSGKTTTCTK
LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK
SENFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQAKAFKDKV
DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI
EGLIDKVNELKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTDFM
SKGNEQESMARLKKLMTIMDSMNDQELDNKDGAKLFSKQPNRVQRVARGAGVATRDVQEL
LTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDPRVLHHMGGMAGL
QSMMRQFQQGAAGNMKGMMGFNNM
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggtgttagcagacttggggaggaagataacagcggcgctgcgctctctcagcaatgcc
accatcatcaatgaagaggttttaaatgctatgctaaaagaggtctgtgctgccctgcta
gaagctgatgtgaacatcaaactggtgaagcagctcagagaaaatgtcaaggcagccatt
gacctcgaggaaatggcctccgggctgaataagaggcgaatgatccagcatgctgttttc
aaggagcttgtcaagctggtggaccctggtgtaaaatcatggacacctacaaaaggaaag
aacaacatcatcatgtttgttggtcttcagggtagtggaaaaaccacaacatgtactaag
ctggcatattactaccaaagaaaaggatggaaaacatgcttgatctgtgcggacactttt
agagcaggtgcctttgatcagctgaagcaaaatgcaacaaaagccagaattcccttttat
ggaagttacacagaaatggatccagtcataatagcttctgagggagtcgaaaaattcaag
tcagaaaactttgaaatcatcattgttgacactagcggtcgacataaacaagaagattct
ctgtttgaagaaatgctacaggtttcaaatgctgtgcaacccgacaacatcgtgtacgtg
atggacgcgtccattggtcaggcttgcgaggctcaggctaaggccttcaaagacaaggta
gatgtggcgtctgtcatcgttactaagctggatggccatgctaaaggtggtggcgctctc
agtgcagttgctgcaacaaagagtcctatcattttcatcggcacaggcgagcacattgat
gattttgagccctttaaaactcagcccttcataagcaaactgcttggcatgggagacatc
gagggactgatagataaagtgaatgaactcaaacttgatgataatgaggagctaattgac
aagcttaaacatggtcagttcacactcagggacatgtatgaacagttccagaacatcatg
aaaatgggaccttttgggcaaatcatgggtatgatcccaggctttggaacagacttcatg
agtaaaggcaatgaacaggagtctatggccaggttaaagaaactcatgaccataatggac
agtatgaatgaccaagaactggacaacaaagatggtgcgaagttgttcagtaagcagccg
aaccgggttcagagggtggcgcggggtgcaggtgtagctaccagagacgtgcaggagctg
cttacccagtacacaaagtttgcccagatggtcaagaaaatgggtggcattaaaggttta
tttaaaggaggagacatgtccaaaaatgttaacccatctcagatggccaaactgaaccag
cagatggcaaagatgatggatcccagagtgctgcaccacatgggtggcatggctggccta
cagtcgatgatgaggcagtttcagcaaggggctgctggcaacatgaaaggaatgatggga
ttcaacaatatgtga
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integrated database retrieval system
