Pangasianodon hypophthalmus (striped catfish): 113538791
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Entry
113538791 CDS
T05759
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phyp03041
]
113538791
Enzymes [BR:
phyp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113538791
Spliceosome [BR:
phyp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
113538791
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
113538791
NCBI-ProteinID:
XP_026789979
LinkDB
All DBs
Position
Unknown
AA seq
724 aa
AA seq
DB search
MEKTADMAAGHQDLGCDDILEFNQFDGLPFSSRYYTLLEERKALPVWEAKCEFMDYITNN
QLVIISGTVKTGQSTQIPQWCAEFCLSVQYRHGTVVCTQIHRQSTVDLALRVADEMDVNI
GHEVGYNIPFQNCCSADTVLRYCTDDMLLWEMMSDPLLEQYGVLLIDQARERTVSTDLLL
GLLKDVLLARPELRLVILTAPHSSDKLLRHYGNVPLIQLEAERPSEMVYGTGRGGVKDYL
YASLQLAMEIHQSQEHGDIVVFLATEQEVECAHAILRREGAGVAPSLGELMPVSVCPEQE
DSLPVLTEGEGRCRRVFLTCGPTEDLFWATHSIRFIIDAGVQKRYVYNPRIRASSIVIQP
ISKSQAECRKQLIGPTGKCFCLYLENTSLPVENVPHIMESDITSTVLFLKRMEIAGLGHC
DFIDRPDPEGLMQALEELDYLAALDNDGNLSEIGIIMSEFPLEPQMAKTLLASCEFDCVS
EVLTIAAMLTAPSCFLVPPVEFKLQALKCHQRFHHSEGDHFTLVNVYNAYKHSQHSSYCS
IERWCDEHFLSLSALQMADAVRAELTEILKRLELPVSCPAFGSKTNTLNIKLALLAGFFM
QVARDIDGTGNYFILTHKHVAQIHPLSVYGSESPKQNLPEWVLYHEHTLSENNCIRTVTQ
ISAHEFIQMTPQYFFYNLPSSESKDILQYVIKQGSAAPGKGKTKAQTLDNSASEEQSYER
CVIQ
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggagaagactgcagacatggcagctggacatcaggacctgggctgtgatgatattctc
gagttcaaccagtttgatggtcttcccttttcctcacgctattacacactgctagaggag
agaaaagctctgccagtgtgggaagccaagtgtgagttcatggactacatcaccaacaac
cagcttgttattatcagtggcacagtgaaaactggacaaagcactcagatcccgcagtgg
tgtgcagagttctgcttgtctgtgcagtaccgccacggcacggtggtgtgcactcagatc
caccggcagagcacagtggatctcgccctgcgtgtggctgatgaaatggacgtgaacatt
ggccatgaagtaggatacaacatccctttccagaactgctgctccgctgatactgttctt
aggtactgcactgatgacatgctgctttgggagatgatgtcagaccctctgttggagcag
tacggtgtgttgttgatcgatcaggctcgggagcgcacggtcagcacagacctcctactc
ggcctgctcaaagatgtgctgctggcgcggcctgagctgcgtctggtcatcctcactgca
cctcactcctccgacaagctgctgcgccactacggaaacgtgcccttgatccagcttgaa
gcagaacgaccctctgaaatggtgtatggcaccgggaggggaggtgtgaaagactatttg
tatgcctctcttcaacttgctatggagatccatcagtctcaagagcatggagatattgta
gtgtttctggctactgaacaagaggttgaatgtgctcatgccatcttgcggagggaaggg
gccggtgtagctccatcgctaggtgagctcatgcccgtgtccgtctgtccagagcaggag
gacagtctgcctgtgcttacagaaggggagggcaggtgcaggagagtcttcctcacttgt
ggtcccactgaagacttattctgggccacacatagcattcgcttcatcattgatgctgga
gtacaaaaaagatatgtgtacaaccctcgaatcagagccagctctattgttattcaacca
atcagcaaaagccaagccgaatgccgaaaacagctgattggtccaacagggaagtgtttt
tgtttgtacctggagaacacgtcccttcccgttgagaacgtgcctcacatcatggagtct
gacatcacttccacggtgcttttccttaagaggatggaaatcgcagggttgggtcactgt
gatttcatcgataggccagatcctgagggcctcatgcaggctttagaagagctggactac
ttagcggctctggataacgacggtaatctgtcggagattggaataataatgtctgaattt
cctctggagccccagatggctaagactcttctggcgtcctgtgaatttgactgtgtgagt
gaggtgctcaccatcgctgccatgctaacagctccaagctgtttcctggtcccacctgtg
gagttcaaactgcaggccttaaagtgccatcagcgtttccatcactctgaaggagaccac
ttcaccctcgtcaatgtgtacaatgcctacaaacacagccagcacagctcatactgcagc
atcgagcgctggtgtgacgagcatttcctgagtttaagtgcccttcagatggccgatgca
gttcgagcagagctcactgagatcctgaagcggttagagctgccagtgtcctgtccagcc
tttggctccaagacgaacactctgaacatcaaactggctctgctggctggcttcttcatg
caggtggccagggacatcgatgggacagggaattacttcatacttacccacaagcacgtt
gctcagatccatcctctctctgtctatggaagtgagtcgcccaagcagaaccttcctgag
tgggttttatatcatgagcacacactgtctgagaataactgcatcagaaccgtcacccag
atctcagcacatgagttcatccagatgactcctcagtatttcttctacaacctgccctct
agtgagagtaaagacatactgcagtatgttataaagcagggctcagcagcaccgggcaag
ggcaagactaaagcgcagaccctcgacaacagcgccagtgaagagcagtcctacgagcgc
tgtgtcatacagtga
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