Pangasianodon hypophthalmus (striped catfish): 113538839
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Entry
113538839 CDS
T05759
Name
(RefSeq) TATA box-binding protein-like protein 2
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113538839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113538839
03021 Transcription machinery [BR:
phyp03021
]
113538839
Transcription factors [BR:
phyp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
113538839
Transcription machinery [BR:
phyp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113538839
RNA polymerase III system
TFIIIB
113538839
RNA polymerase I system
SL1/TIF-1B
113538839
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
113538839
NCBI-ProteinID:
XP_026790046
LinkDB
All DBs
Position
Unknown
AA seq
311 aa
AA seq
DB search
MDEEASLESYFDQSIAGSSEYIFEGDLGLHGPPQLQDPSFLSSSISSQQKDLSEDLDLSF
LPDELSAQDEGGENAAVGSAEDSGVFLDCTTAASAEADTDISKRQPAASPFCNLPMTPMT
PMTPVAPVAESSGIIPQLQNIVSTVNLACPLDLKAIALQARNAEYNPKRFAAVIMRIREP
RTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVCFP
IRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKDRSEIYEAFEN
IYPILKGFRKQ
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaggcgtcgctggagagttactttgaccagtcaattgctggttcctctgag
tacatatttgaaggggatttgggtttgcatggccccccacagcttcaggatccctctttc
ctctcctcctctatctccagccagcagaaagatctctctgaggatctggacctgagcttt
ctgcctgatgagcttagtgctcaggatgaagggggagagaatgcagcagtgggttctgca
gaggacagtggtgttttcctggactgtacaactgcagcctcggctgaagcagacactgat
atcagtaagaggcagcctgcagcctcccccttctgcaacctccctatgacccccatgaca
cccatgacccctgttgcccctgtggcagaaagttcaggaatcattccacaattacagaat
atagtgtccacagtaaacctggcttgtcctctagacctgaaagccattgcccttcaagct
cgaaatgctgagtacaatccaaagcgttttgctgctgtaattatgcggatccgtgaaccc
aggaccactgccctcatcttcagctcaggaaaaatggtctgcactggtgcaaagagtgag
gagcagtctcgccttgctgcaaggaagtatgcccgggtggtacagaagctcggcttccca
gccaaatttctcgacttcaagatccagaacatggttggcagttgtgatgtgtgtttccca
atacggttggagggcctggttctgactcaccaacagttcagcagctatgaacccgagttg
tttcctggtttgatctaccgtatggtgaagccacggattgtcctcctgatttttgtgtct
ggaaaagttgttcttacaggtgctaaagatcgctccgaaatatatgaagcttttgagaat
atctacccaattctgaaaggattcaggaaacagtga
DBGET
integrated database retrieval system
