KEGG   Pangasianodon hypophthalmus (striped catfish): 113538909
Entry
113538909         CDS       T05759                                 
Symbol
cdc5l
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113538909 (cdc5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:phyp03041]
    113538909 (cdc5l)
   03400 DNA repair and recombination proteins [BR:phyp03400]
    113538909 (cdc5l)
Spliceosome [BR:phyp03041]
 Complex B
  Other components
   Prp19 complex
    113538909 (cdc5l)
 Complex C
   Prp19-CDC5 complex
    113538909 (cdc5l)
DNA repair and recombination proteins [BR:phyp03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    113538909 (cdc5l)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect DUF4072 Rap1_C
Other DBs
NCBI-GeneID: 113538909
NCBI-ProteinID: XP_026790149
LinkDB
Position
Unknown
AA seq 803 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEYLLDKAAQRDNEEDTADDP
RKLKPGEIDPNPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIDIQKKRKKKRGVDYNAEIPFEKKPAPGFYDTSMEQYDPLEPDFK
RLRQQHLDGELRNEKEERERKKDKQKIKKKKESDLPSAILQTSGVSEFTKKRSKLVLPAP
QISDAELEEVVKLGQASEIARQTAEESGITNSASSALLSEYNVTNNSMALRTPQTPAAQD
KILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVIQTPNTMLSTPFRTPSHGA
EGLTPHSGMTPKPSIGVTPGRTPLRDKLNINAEDGVVDYTDPAYAKHLQRESREQLKLGL
MSLPLPKNDFEIVLPENAEREMEEPEVDESFVEDAADIELRKHAAREAEREKELRQRHTA
VQRSLPRPSAVNETILRPQNVEPPLTELQQAEELIKKEMITMIHYDSLHHPFTELLAKKG
KGAGSGSTNAEHVAYLEKSPYEKVAEEELKKAKELLRQEMEVVKHGMGHGELSIEAYNQV
WEECYSQVLYLPGQNRYTRANLASKKDRIESLEKKLEVNRGHMTTEAKRAAKMEKKMKIL
LGGYQSRAMGLIKQLSDLWDQVEQAHMELHTFEELKKQEDLAIPRRQEALREDVQRQQDR
EKELQQRFADLLLEKETLLSQKF
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgccgcgaattatgattaaaggtggcgtttggcgcaacactgaggatgagattcttaaa
gcagctgtaatgaaatatggcaaaaatcagtggtctcgtattgcctctctgctgcacaga
aagtcggccaaacagtgtaaagctagatggtatgaatggctggatcccagcattaagaaa
acagaatggtcacgtgaagaagaggagaagctccttcatctggccaaactgatgcccacc
cagtggagaacgatagctcccatcatcggcagaaccgcagcacaatgcctggagcactat
gagtaccttctagacaaagctgcccaaagggacaatgaagaagacacagccgatgatcct
cgcaagctcaagccgggggagattgacccaaaccctgaaaccaagccggccagaccagac
cctgtggacatggatgaagatgagttggagatgctgtctgaggccagggctcgtttagca
aacacacagggcaaaaaggccaagcggaaagccagggagaagcagctagaggaggcgagg
cgcttggcagccctgcagaagcgcagagagttgcgtgctgcaggcatagacattcagaag
aagcggaagaaaaagcgaggtgtagactacaatgcagagattccctttgaaaaaaagcct
gctccaggattttacgatacatctatggagcaatacgatccacttgagcctgacttcaaa
agacttcgccagcagcatctcgacggagagctgagaaatgagaaagaagagcgtgagcgt
aaaaaggataagcagaagatcaagaagaagaaagagtccgacctcccctctgccattttg
cagactagtggggtgtcagagttcactaaaaaaaggagcaagctagtgctgcccgcacca
cagatatcagatgccgaactggaggaggtggtgaaactcggccaggccagtgaaatcgct
cgtcaaaccgccgaagagtctggaatcacaaactcagcttccagcgctctgctttctgag
tacaatgtcaccaataacagcatggccctgcgcacaccccagactcctgcagcacaggac
aagattctacaggaagcccagaatctgatggcacttactaatgtggacacccctctgaag
ggtggtctgaacacgcctttgcatgagagtgacttctctggggtcaccccacagaggcag
gtgatccagacccccaacactatgctctctacacctttcagaacccctagtcatggcgca
gagggtttgacccctcacagtggcatgaccccgaagccttcaataggcgtgaccccaggt
cgcacgcccctgcgggacaaactcaacatcaatgctgaggatggtgtggtggattacaca
gatccagcttacgccaaacacctgcaacgggagtctcgcgagcagctgaagttggggctt
atgtctcttccactgcccaagaatgactttgagatcgtgctgcctgagaacgctgagagg
gagatggaagagccagaggtggacgagagctttgtggaggatgcagctgatattgagctc
cgtaaacatgcagccagagaagctgagcgagagaaagagctgaggcagagacacacagca
gtgcagaggagtttacccaggccctcagcggtaaatgagaccattctgaggcctcagaac
gtggagcctcctctcacagagctgcagcaggcagaggagctcataaagaaagagatgatc
accatgattcactatgacagtctgcaccatccattcacagagctcctggctaagaaaggt
aaaggagcagggtcaggttctaccaacgctgaacatgttgcctacctggagaaatcgccc
tatgaaaaagtggcagaggaggaactcaaaaaggctaaagagctactgcggcaagagatg
gaggtggtgaagcatggtatgggtcacggcgaactttccattgaggcctataaccaagtt
tgggaggagtgttacagccaggtgttgtacctgcctggacagaaccgatacacaagagcc
aatctagccagcaaaaaggacaggattgagtccctggagaagaaactggaggtcaacaga
gggcacatgacaacagaggctaaacgggcagctaagatggagaagaagatgaagattctt
ttggggggataccagtctcgggccatgggtctgataaagcagctcagtgacctgtgggac
caggtggagcaggcccacatggagttgcacacctttgaggagctgaagaagcaggaggac
ctggccatcccacgcagacaggaggctctgagagaagatgtgcaaagacaacaggaccga
gagaaggagctccagcagaggtttgctgatcttctccttgagaaggaaacattgctttca
cagaagttctga

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