Pangasianodon hypophthalmus (striped catfish): 113538988
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Entry
113538988 CDS
T05759
Name
(RefSeq) neurofilament medium polypeptide-like
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113538988
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
113538988
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Vps23_core
DUF1664
Motif
Other DBs
NCBI-GeneID:
113538988
NCBI-ProteinID:
XP_026790307
LinkDB
All DBs
Position
Unknown
AA seq
1046 aa
AA seq
DB search
MERLLNGAGWRREEQRYQPPPSSQRIARAPALSRASASGASTPKAGHSSRHFAPEMPLRM
TNEKELLRGLNDRFAGFIEKVHRLESQNRALEREIEDIRLKAKSSTSLAKQYEPELQELR
RQVRDMAMQKHRMELEQKRVEDEFNALREKCEGEARSRAEAEESISALKKYIDNAYLAQQ
EMDRKAKALTDEIEFLKRNHEAEVSDILTQMKETRVCAEVSGLGKGELTAALRNIRTQLE
GRAFCLDTHSEQHFSSQLARLTKAAETDREALIATKAEINQYRRQLQTKSVELDSVRGMR
EALERQLYDLEQRHTAEIHHYQDTIRELEQELKNTKYDMSSHVQEYRDLLNVKMALDAEI
YSYRKLLEGEESRYSTLSDAQIPVPYVYRQSPIYTLLSVPKVGGVTRKAEPQYKFVEEII
TETTREDIEISDTGSDDAEEQREGDKVCSEKENAGVAAGSEAHLEEKKTQESDAEDNTGS
PNAEQLDQQKQKPTEKEEQLLKKSTDVTDVMDLKEGGMNTEPAQNNLTASEQTGEKDTDN
NYNKDDDTDSKTKEPDLDTKTEKPQADMSGDEDVEKVTLDTEKGKQDIAKEIDQASIKQP
QPTEQTATQEAITEPGKSAMEEISPKSENETAKKETQNVAEPEDSSPGKAMEKDREISEV
KSVKVDTSTADSQPVSQKAETGQETRPNSQADSKQSVETSQAEVLDTTNAASAQDNAAEV
QKELAEKVKTEAPALKSEVKEIKSEEVKKEDSKPEVDRETVKPEKGDSAQSTEAQKTQDN
VSKTAATETEVETSETKEIQTKDMMDSAKKEEDTESKKTEKEVDQMQIKEQIKVVGMETK
SEEQSQKNADGTKEDTVDSPKTEENVTTKSSEIQKEDIQKDTEPKSTEKETKYEQKPEKQ
GSKEHELETLEDIKEMDRIKPKGQEIDSKTSKDVQPEQSVPKTSPEKEQSKDQTHTHKDS
REIKDTKIEISDKTDSSEAKQDSSKMGMTKSKDLEKDPTPLKDSKKPEPTEKEQVSVSEK
GQDNSMKADLKKERDVPEVTENGVNI
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggagcgtctgctaaacggagcaggctggagacgggaagagcagcgctatcagccacct
ccatcatcacagcgcatcgcaagggcacctgcgctcagcagagccagcgcgagcggggca
tcaactccgaaagcaggccacagctcgcgccactttgctcctgagatgcctctaaggatg
acgaacgagaaagaattactgcgcggcctgaacgaccgattcgcgggctttatcgagaag
gtgcatcgtctggaaagccaaaacagagcgctggaaagggaaatagaggacattcgacta
aaagcaaagtcgtccacgtctctggccaagcagtacgagccggagctgcaggagctgagg
aggcaggtgcgtgacatggcaatgcagaagcaccggatggagctggagcagaagcgtgtg
gaggacgagtttaacgcgctgagggagaaatgcgaaggggaggcgcgcagcagagctgaa
gccgaggagagcatttctgcgctgaagaaatacatcgacaacgcgtatctagcccaacaa
gagatggacagaaaggcgaaagctcttacagacgagatcgagttcctgaagagaaaccac
gaggctgaagtgagcgatattctgacgcagatgaaggagacgcgggtttgtgcagaagtg
agcggtttggggaaaggcgagctcaccgcggcgctcaggaacatcaggacacagctggaa
ggtcgcgctttctgtctcgacacgcactcagagcagcacttcagcagtcagctggccaga
ctcaccaaagctgccgagaccgacagagaggctctgatagccacaaaagctgaaatcaac
caatacaggaggcagctgcagaccaagagcgtggagctggattcagtcagagggatgaga
gaagctctggagaggcagctgtatgacctcgagcaacgacacaccgccgaaatccatcac
taccaggacaccattagagaactggaacaggagctgaaaaacaccaaatatgacatgagt
agccatgtgcaagagtatcgcgatctgctaaatgtgaaaatggccttggatgctgaaatc
tattcatacagaaaattgctggagggtgaggagtcaagatactccactctttctgatgca
cagataccagtgccttatgtttacaggcagtcacccatctatactctgcttagtgtccca
aaggtagggggagtgactcgcaaagcagagccgcagtacaagtttgttgaggagattatt
acagagacaaccagggaagacatagagatatcagacacagggtctgatgatgctgaagaa
caaagggagggtgataaagtgtgtagcgagaaagagaatgcaggtgtagcagcaggaagt
gaagcgcacttagaggaaaaaaagacccaagaatcagacgcagaggataacacaggcagc
cccaatgcagaacaactggaccaacagaaacagaaaccaacagaaaaggaagagcagtta
ctaaaaaagtctacagatgttacagatgttatggatctcaaggaaggcggcatgaatact
gaaccagcacagaacaatttaactgcatcagaacaaactggagagaaggatacggataac
aattacaacaaagatgatgacacagactccaaaaccaaagaaccagatttagacacaaaa
acagaaaaaccacaagcagatatgagtggtgatgaggatgtagaaaaggtaactctcgac
actgaaaaagggaaacaagacatagcaaaagaaatagaccaagccagtattaaacaacca
cagccaacagagcaaacagccacacaggaggccattacagagccaggaaaaagtgccatg
gaagagatttctccaaaatctgagaacgaaacagcaaaaaaagagacacaaaatgtagct
gagcctgaagattcctctcctggaaaagcaatggagaaagacagagaaattagtgaggtg
aaatctgtgaaggtggacacatctactgctgactcacagccagtatctcaaaaagctgag
acaggacaagagacacgtcctaacagccaagcagattcaaagcagagtgtagaaacctca
caggctgaagtactcgatactactaatgcagcgagtgcacaggataatgcagcggaggtg
caaaaagagctggcagagaaagtaaagacagaggcaccggcgctaaaaagtgaagtaaaa
gaaataaaatctgaggaggtgaaaaaagaggacagcaaaccagaggttgatagagaaact
gtgaaaccagaaaagggagacagtgcccaatctacagaggcacaaaaaacacaggacaat
gtctccaaaactgctgccacagaaacagaagttgaaacatctgaaacaaaggagattcaa
acaaaggacatgatggacagtgcaaaaaaggaggaagatactgaatcaaagaaaacagag
aaagaggttgatcaaatgcagatcaaagaacagataaaagttgtagggatggagacaaaa
tcagaggagcagtctcagaaaaatgcagatggcactaaagaagatacggtagacagtcct
aaaacagaggaaaatgtaacaaccaaatcctctgaaatacagaaagaggacattcagaag
gatacagagccaaaatctactgaaaaggaaacaaaatatgagcaaaaaccagagaaacaa
ggttccaaggagcatgaactggagactttggaggacatcaaagagatggatagaatcaag
cctaaggggcaagagatagacagtaaaacctctaaagatgtacagcctgaacaaagtgtt
ccaaagacctcaccagaaaaagaacaaagtaaagaccagacacacacacacaaagactca
cgtgaaatcaaggacacaaaaattgagatatcagacaagactgatagcagcgaggcaaag
caggacagtagcaagatgggcatgactaaaagtaaagatcttgaaaaggatcctacaccc
ctgaaagattccaaaaaaccggagcctacagagaaagaacaagtttctgtatctgagaaa
gggcaggacaacagcatgaaagcagatctgaaaaaagagagagacgtgccagaagtaact
gagaatggagtaaatatatga
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