Pangasianodon hypophthalmus (striped catfish): 113539058
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Entry
113539058 CDS
T05759
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113539058 (npas1)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
113539058 (npas1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
113539058
NCBI-ProteinID:
XP_026790417
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MAAMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASVIRLTISYLHMRHFASQGDPPWSPLLEGDNNCNKVRRNSHSLA
TDIFEQHLGAHVLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIKPHLRTEAGCQTVQESASSSASTSSLAGTPEPAPSSPLSSGDEPAERGFF
VRMKSTLTKRGLHVKSSGYKVIHVTGRIRCRPALVPGSSRSLHRPMGLVALAHTLPPSTL
NEVRMESHMFVFRVNMDLQITYCENRISEYMDLSPAEVVGHTCYHFIHVEDLDNIRQSHE
DLLRKGQVVTGYYRWLQRRGGYLWVQSCATVSINHKAPHERNVIWVNYILSRTEMPDMPL
DLLQLPETLKAERLRASSSTRDISPKAHGPNGAHPTKGGVGRNESERKGRDSYTHPTANQ
SDNRRKRPHHSSPENTPPQTRRQLEVFRHREDSLSGSSDSASDSEAEEEEEDDKEDEWEH
NGNSKRLKTDVGASKKNSETGKVRNGRAVIQQLKSVVTSTASSNVKTEQEMLGAGVCSAT
GGRWSNTQSTRGINGSSPPSQDSESVTTEAPAKGLFSPPSPISASPLPREDRSLHGGRTP
DYELLQRLAAGGAAGRVLFHPLALGPPGHQSLYAPSTIRYAPPELPTAHAEGPRLDHAPK
SPTFFPHLQRIAALPPFSGFSPSEPPFAPSLPFCMNGLRGAAGTDED
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggcggccatgccgttcgtcagtgagggaaagtgtgttagtgtggagtgggacttcctg
caagggctcctcgccaaacctcccaccctgccctgtttacaaaacctgcggaaggagaag
tcccgaaatgcggctcgctctcgtcgtggtaaagaaaactttgagtttttcgagctggcc
aaaatgctgcctctccctggtgccatcactagccagctggacaaggcctcggtcatccgc
ctgaccatcagctacctgcacatgagacacttcgccagtcagggagacccgccctggagc
cccctgctggagggggacaataactgcaacaaggtgcggagaaacagtcactcactggcc
actgatatattcgagcagcacctgggagcacatgtactacagtctctggatgggtttgtg
tttgtggtcagtcaagaaggccgtttcctctatatttctgagacagtgtcgatctacttg
ggcctctcacaggtggaattaacaggcagtagtgtgtttgactacatccatcctgcagat
catgtggagatggcagagcgattgggaattaagccacacctccgcacagaggcgggctgt
cagactgtccaggaaagtgcttcaagttccgcctccacatcctcattggctggcacacct
gaaccagccccctccagtccgctgtcatccggagatgagccagcagagcgaggtttcttt
gtccggatgaaatccacccttactaagcgcggcctgcacgtcaaatcctctggttataag
gtgatccacgttactggccggattcgctgtcggccagccctggttccaggctcttcacgc
tcactccatcggccaatgggattggttgctcttgctcacacactcccgccctccactctt
aatgaggtgcgcatggagagtcacatgttcgtgtttcgggtcaacatggatctccagatc
acctactgcgagaacaggatctcagaatatatggacctgagcccagctgaggtggtggga
cacacctgctaccactttatccatgtggaagatctagacaacatccggcaaagccacgaa
gatttgctgaggaagggtcaggttgtgactggttactaccgctggctgcagaggagaggc
gggtatttgtgggttcagtcatgtgccactgtgtccatcaaccacaaagcaccacatgaa
cgcaacgtcatctgggtcaactacatactcagtcggacagaaatgcctgacatgccactg
gatttactacaactcccagaaaccctgaaagctgagcgtcttcgggcgagctcttccact
cgtgatatctctccaaaggcacatggcccgaatggtgcccacccaacaaagggcggagtt
ggacgaaatgaatctgagcgcaaagggagagactcttacactcaccctactgctaaccaa
tcagataacaggaggaagaggcctcaccactccagccctgaaaacacccctccacaaaca
aggagacaactcgaggtgttccggcatagagaggacagtctgtcagggtcctcggattca
gccagcgacagtgaagcggaagaagaggaagaggacgacaaggaagacgagtgggagcac
aacggcaacagcaagagactgaagaccgatgtgggagcctctaagaagaacagcgagaca
gggaaagtccgtaacggtcgtgctgtaatccagcagctgaagagcgtggtgaccagcact
gccagctctaacgttaaaactgagcaggagatgttgggtgctggtgtttgttcagccact
ggagggcgatggagcaacactcagtccaccaggggtataaatggcagcagccccccatcc
caagattccgagtcagtcactacagaagctccagctaagggtcttttcagccctccctca
cccatctcagcttcacccctgcctagggaagatcgttccctccacggaggccgcacgcct
gattacgagcttcttcagagactagctgcgggtggagcagcggggcgtgtactgttccac
cctctcgctctcggccctccagggcatcagagcctttacgctccgagcaccatccgctac
gcccctcccgagctgcccactgcccacgctgaggggccacgcctggaccacgcacccaaa
tcacccactttctttccacacctgcagagaatcgccgctctaccacccttcagcggcttc
tctccttcagagcctccctttgctccatcccttcccttctgcatgaatggactgagagga
gcagcagggacagatgaggactga
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