Pangasianodon hypophthalmus (striped catfish): 113539089
Help
Entry
113539089 CDS
T05759
Name
(RefSeq) polypyrimidine tract-binding protein 2-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phyp03041
]
113539089
Spliceosome [BR:
phyp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113539089
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_occluded
RRM_8
RRM_PARP14_3
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
113539089
NCBI-ProteinID:
XP_026790446
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MDGIASDVAVGVKRSSDDLLSGSLYSSPNTSVKANGSDSKKLRVEDGMDNPPSRVIHIRK
LPNEVSETEVIALGLPFGKVTNILMLKGKNQRAQAVLQAVCAVQEGGSPSSDSAGESVLI
PPPSPVLRIIIDNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQA
KLSLDGQNIYNSCCTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAADGQPSVDPAMAAAL
GKDSTSLLGSISPLSAAAAAAAAAGRVALSGHSAAGAVLLASNLNDEMVTPQSLFTLFGV
YGDVQRVKILYNKKDSALIQMTDGNQAQLAMSHLNGQKMFGKIIRVTLSKHQTVQLPREG
LDDQGLTKDFINSPLHRFKKPGSKNFQNIFPPSATLHLSNIPEKVNEEDLRLLFSNSGGT
VKAFKFFQDRKMALLQMATVEEAIQALIDLHSYDMGRGHRLRVSFSKSTI
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgctagtgatgttgcagttggtgtaaagagaagttcagatgatttgctt
tctggcagcctttacagcagtccgaacacttcagttaaggctaatggaagtgacagcaaa
aaactcagagtggaggacggcatggacaaccctccctctagagtcattcacatccgtaaa
cttccgaacgaggtttctgagacagaagtcatcgccctgggcctgccctttgggaaagtc
accaatatcctgatgctgaaaggcaaaaatcagcgtgcccaggccgttctgcaggcagtg
tgtgctgttcaggagggaggttctccaagctcagactcagcaggagagagtgtgttaata
ccaccgccaagtccagtcctgcgcatcatcatcgataacatgttctacccggtaacactg
gacgtcctgcagcagatcttctccaagttcgggacagtgatgaagattatcacattcacc
aaaaataatcaattccaagcgctgctgcaattcagcgatcctgtaaatgctcaacaggcc
aaactgtctttggatggacagaacatctataactcgtgctgcacgctgcgcatcgacttc
tccaagctcgtcaacttaaatgtgaagtacaacaacgataagagtcgagattacacaaga
cccgagctgcctgcagcagacggtcagccttctgtagatccagcgatggccgctgcactt
ggcaaggactccacatccctactggggtcaatcagtcctctaagtgcggcggccgcggca
gcggcagcagctgggcgagtcgctctgtcaggacactcggcggctggtgcagtgcttcta
gccagcaatctcaatgatgagatggttacgccccaaagtctctttaccctcttcggtgtg
tatggggatgtgcaacgagtcaagatcctctacaataagaaggacagcgccctcatccag
atgacagatggaaaccaggcacagttagccatgagccacctgaatggacagaagatgttt
gggaagattatccgtgtgaccctttccaaacaccagacagtgcagcttcctcgagaaggc
ttggatgatcagggcctcactaaagacttcatcaattcaccccttcatcgtttcaaaaag
cctgggtcaaagaatttccagaacatctttcctccatcagccacactccacctctccaac
atccctgagaaggtgaatgaagaggacctgagacttctcttctccaactctggaggcaca
gtgaaggccttcaagttctttcaagatcgcaaaatggccctgctgcagatggcgacggtg
gaggaggccattcaagccctgatcgacctccatagctatgatatgggccgtggccatcgt
ctccgagtctccttctctaaatccaccatctga
DBGET
integrated database retrieval system
