Pangasianodon hypophthalmus (striped catfish): 113539140
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Entry
113539140 CDS
T05759
Symbol
myo1c
Name
(RefSeq) unconventional myosin-Ic isoform X1
KO
K10356
myosin I
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
113539140 (myo1c)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phyp01009
]
113539140 (myo1c)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113539140 (myo1c)
03036 Chromosome and associated proteins [BR:
phyp03036
]
113539140 (myo1c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113539140 (myo1c)
04147 Exosome [BR:
phyp04147
]
113539140 (myo1c)
Protein phosphatases and associated proteins [BR:
phyp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113539140 (myo1c)
Membrane trafficking [BR:
phyp04131
]
Endocytosis
Phagocytosis
Others
113539140 (myo1c)
Others
Actin-binding proteins
Myosins
113539140 (myo1c)
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
113539140 (myo1c)
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
113539140 (myo1c)
Exosome [BR:
phyp04147
]
Exosomal proteins
Proteins found in most exosomes
113539140 (myo1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
IQ
Zeta_toxin
AAA_22
AAA_16
nSTAND3
Motif
Other DBs
NCBI-GeneID:
113539140
NCBI-ProteinID:
XP_026790497
LinkDB
All DBs
Position
Unknown
AA seq
1068 aa
AA seq
DB search
MMELKIQLVPTGEIILPPGKNGESYCNCCAKAVGSDSVRAMMESALTARDRVGVQDFVLL
ENHTSEVAFIDNLRKRFKENLIYTYIGSVLVSVNPYKDLEIYTKQHMERYRGVNFYEVSP
HIYAVSDNAYRSMRTERRDQCILISGESGAGKTEASKKVLQYYAITCPASDQVQTVKDRL
LQSNPVLEAFGNAKTLRNDNSSRFGKYMDIQFDFKGAPVGGHILNYLLEKSRVVHQSHGE
RNFHIFYQLIEGGEEDLLRRLGLERNAQQYQYLVKGNCPKVSSINDRNDWKVVRKALSII
GFSDDEVEELLNIIASVLHLGNIQYGSEDGGNAYITVDTQIKYLARLLGVDSCILKEALT
HKKITAKGEELMSPLNQEQASSARDALSKAIYGRTFTWLVNKINASLAFKEDFFSGKSTS
VIGLLDIYGFEVFQNNSFEQFCINYCNEKLQQLFIELTLKSEQEEYEAEGITWEPVQYFN
NKIICDLVEEKFKGIISILDEECLRPGDATDFTFLQKLEDTLGGHAHFLTHKLADGKTRK
VMGRDEFRLLHYAGEVNYNVNGFLDKNNDLLFRNLKEVMCMSENKILTQCFDREELTDKK
RPETTATQFKNSLAKLMEILMSKEPSYVRCIKPNDAKQAGRFDDVLIRHQVKYLGLMENL
RVRRAGFAYRRRYEIFLQRYKSLCPDTWPNWDGRLVDGVSTLVRHLGYKPEEYKLGRTKI
FIRFPKTLFATEDALEVRKHSLATKLQANWKGCCQKSKYRKMRRSAILIQAWWRGILARR
RACRRRQAADTIRRFIKGFMYRHQPRCPENEYFLDYVRYSFLMKLQRSLPKSVLDKSWPT
PPPALTEASDHLRKLCMQNMVWKYCKSINPEWKHQLEQKLVASEIFKDKKDNYPQSVAKL
FVGTRLNGEDINPKVLQALGSEKMKYAVPVTKYDRRGYKPRSRQLLLTGSSAIIVEETKL
KQRIDYSTLKGISVSSLSDGIFVLHVACEDNKQKGDAVLQSDHVIETLTKVAICADKINN
INISQGSITFTVCQGKEGMIDFTSGSELLIAKAKNGHLSVTAPRLNSR
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgatggagctgaagattcagctggttccaacaggagagatcatcttgcctcccgggaag
aatggagagagctactgtaactgctgcgccaaggcggtggggagtgacagtgtgcgggca
atgatggagagcgccctcacagccagggaccgggtgggagtgcaggattttgtcctgctc
gagaaccacaccagcgaggtggccttcattgacaacctgcgcaagcgcttcaaggagaac
ctcatctatacgtacattggctcagtgttggtgtcggtgaatccctataaagacttggag
atctacaccaagcagcatatggagcggtacagaggcgttaacttctatgaagtctcccct
cacatatatgcggtgtctgataatgcgtatcgctccatgcggacggagagacgggaccag
tgtatcctgatctctggagagagtggtgctgggaagacggaagcctctaagaaggttctg
cagtactacgccatcacctgtcctgccagcgaccaagtgcagaccgtgaaagaccgccta
ctgcagtccaaccctgttctggaggcctttggaaatgctaaaactttgcgcaatgacaat
tcaagccgttttgggaaatacatggacatccagtttgacttcaagggtgctccagttggg
ggtcacatcctgaactacctgctggagaaatctcgtgtcgtgcaccagagccatggagaa
cgaaacttccacatcttctatcagctcattgagggcggcgaggaggatctgctcaggaga
ctcggcctggagaggaacgcacagcagtaccagtacctcgtgaagggtaattgtcctaaa
gtgagctccattaatgaccgcaacgactggaaggtggtgagaaaagctctgagcatcatt
gggttcagcgatgatgaagtggaggagctattaaacatcattgccagtgtgctacatttg
gggaatattcagtacgggagtgaggatggtggcaatgcctacattaccgtagacacccag
attaaatatttagccaggttattaggcgtggatagctgcattctcaaagaggctctgaca
cataagaagattactgccaaaggagaggagctgatgagtccgttgaatcaggagcaggct
tcctcagcgcgagatgctttatctaaagccatttatggacgcaccttcacctggctcgtg
aacaaaatcaacgcctctctggccttcaaggaggacttcttcagtggtaagagtacatct
gtcattggcctgttggatatctatgggttcgaggtcttccagaacaacagttttgagcag
ttctgcatcaactactgcaatgagaagctgcagcaactcttcatcgagctgaccctgaaa
tcagaacaagaggagtatgaagctgagggaatcacgtgggagcctgtgcaatatttcaat
aacaagattatttgtgatcttgtggaggagaagttcaaaggcattatctcgatcttggat
gaggaatgtctgaggccaggagatgccacagacttcactttcctacagaagctggaggac
acattaggcggccatgctcacttcttaactcataagctggctgatggaaagacccggaaa
gtgatgggtagagatgagttcaggctgctgcattatgccggagaagtcaactacaatgta
aacggctttctggacaagaacaatgatctcctcttcagaaatttgaaagaggtgatgtgc
atgtcagaaaacaagatcctcactcagtgtttcgaccgggaagagttaacggacaagaag
cggccagaaacaacggctacccagtttaagaacagcctggccaagctgatggaaatcctc
atgtctaaggaaccgtcatacgtgcgctgcatcaaacctaacgatgccaagcaggctggc
cgatttgatgatgttttgatcagacatcaagtgaagtatctgggcctgatggagaatttg
agagtaaggagagcgggctttgcctaccggcgccgctacgagatcttcctccagaggtat
aagtcgttgtgtccggacacctggcccaactgggacggccgcttggtagatggagtctcc
acacttgtcaggcacctgggttacaaacctgaggagtacaaacttggcaggaccaaaatc
ttcatccgttttccaaagaccttgtttgcaacagaagatgcattagaagtccgaaaacac
agtcttgcaaccaagcttcaggcgaactggaagggctgttgtcagaaatccaaataccgt
aaaatgagacgatcagccatcctgattcaggcctggtggagaggaattttggcccgcagg
agagcatgtcgcagaagacaagctgctgacaccattcgcagattcattaaaggattcatg
taccgccatcagccacgctgtcctgagaacgaatacttccttgactacgtgcgctactca
ttcctaatgaagctacagaggagtttgcctaaatcagtactggacaagagctggcctaca
ccgccacctgccctgactgaggcatcagaccacctgcgcaagctgtgtatgcagaacatg
gtgtggaagtactgcaagagcatcaacccagaatggaagcaccagttggagcagaagttg
gtggccagtgaaatttttaaggacaagaaagacaactaccctcagagtgtcgccaagctg
tttgtgggaacaaggctcaatggggaggatatcaatcctaaagtgctccaggctctgggc
agtgagaagatgaagtatgctgttccagtgactaaatatgacagaagaggatacaaaccg
cgttcacggcagctgctactgactggcagcagtgcgatcatagtagaggagaccaagctg
aaacaacgcattgattacagtactctgaaaggcatttctgtcagctccctcagcgatggc
atttttgtcctccatgttgcctgtgaggacaacaaacagaagggtgatgcagttctacag
agcgatcatgtgattgagacgttaaccaaagtggcaatctgtgccgacaagatcaacaac
atcaacatcagccagggaagcataacattcacagtgtgtcaaggaaaagaaggaatgatt
gatttcacatccggctctgagctgctcattgccaaagctaagaacggacacctttcagtg
actgctcctcgcctcaattcaagatga
DBGET
integrated database retrieval system
