Pangasianodon hypophthalmus (striped catfish): 113539166
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Entry
113539166 CDS
T05759
Name
(RefSeq) rab-interacting lysosomal protein-like
KO
K13883
Rab-interacting lysosomal protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04145
Phagosome
phyp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113539166
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113539166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113539166
Membrane trafficking [BR:
phyp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
113539166
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RH1
RILP
Hmw_CFAP97
Herpes_BLRF2
Emfourin
Microvir_H
CtIP_N
Motif
Other DBs
NCBI-GeneID:
113539166
NCBI-ProteinID:
XP_026790544
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MEGIRHQDANRLNECFNRTISALTVDDVYDIAKLIGSDVEKLLDTYGKTSVESLVPKIVK
VLELLESFTASYHTHKCKEENLLRAFETLQLQQQDANKTDTREWQQKEQKSRLEMEALQK
ELLQLQEENQELLGRLQSSLSKEDRTQRQEREVMLKLKEVVDKQRDELRAKVLEISKMSK
EVEALQEQLERFMKMNAELRNKQSMMQAQVKSTAERKVDLEADLCEKQKEIQRLVTQLEQ
AKANTAPNTNSPDLDMTYKVIIDLRDPNRPCFTKQEVRDILFERNELKANLFLVQEELAF
YQREILNDERCPGFLLEAVRGAIKKQRTVIKAKMLGIPEDECSSDEEKGPLFEKRKDEDC
PDSRPPESRIRTFFGYLSRSGSDRSSHQVQSSAWEIINAEEHVPEVENGPGGSP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcatcaggcaccaagacgcgaacaggctgaacgagtgttttaacaggactatt
tcagctctaaccgtggacgatgtgtacgacattgccaagctgatcggctccgacgtggaa
aagctcctcgacacctatggcaaaacgagtgttgagagtttggtgcctaagatagtgaaa
gtgctggagctgctggagagcttcacagccagctaccatacacacaaatgtaaagaagag
aatctactgagggcgtttgagacactacagcttcaacagcaggacgctaacaagacggac
actcgcgaatggcagcagaaggagcagaaatcgaggctggagatggaggcgttgcagaag
gaattgctgcagctacaagaggagaaccaagaactgctgggtcgccttcagagttccctc
tctaaagaagaccgtacacagcgtcaggagagagaggtgatgctcaaacttaaagaggtg
gtggataaacagcgtgatgagctcagagccaaagtgctggagatatccaagatgtctaaa
gaggtggaagcgcttcaggagcagttagagcgctttatgaagatgaacgcagagctgagg
aataaacagagcatgatgcaagctcaggtgaagagcacggcagagaggaaggtagacctc
gaggctgacctgtgtgagaaacagaaagagatacagcgactcgtcacacagctggagcag
gccaaggcaaacactgctcctaacacgaacagtccagaccttgatatgacttataaggtg
atcattgacctgcgggacccgaacaggccgtgcttcaccaagcaggaagtgcgagacatt
ttgtttgagaggaatgagctaaaggccaatctcttcctggtgcaagaagagctcgccttc
taccagcgggagatcctgaatgatgagagatgtcctggcttcttactggaagcagtgcgt
ggcgctataaagaaacagaggaccgtcattaaggccaaaatgctgggtataccagaggat
gaatgcagcagtgatgaagagaaaggacccttgtttgagaagagaaaggatgaagactgc
cctgacagcagacctccagaatcacgcatcagaaccttctttggctacctgagccgctca
ggcagtgacagaagtagccatcaggtccaaagttctgcgtgggaaatcattaatgcagaa
gagcacgtacctgaggtggagaatgggcctggaggctctccctga
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