Pangasianodon hypophthalmus (striped catfish): 113539192
Help
Entry
113539192 CDS
T05759
Symbol
rnf169
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113539192 (rnf169)
03400 DNA repair and recombination proteins [BR:
phyp03400
]
113539192 (rnf169)
Enzymes [BR:
phyp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
113539192 (rnf169)
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
113539192 (rnf169)
DNA repair and recombination proteins [BR:
phyp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
113539192 (rnf169)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
113539192
NCBI-ProteinID:
XP_026790593
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MAAAGCAGSVSGLGQQAKARPGAVSNHRHVRCLTLEEARCPVCLEILLEPVTMPCRHSVC
LHCFKRTVECSGLCCPSCRLRVSSWARNKQSREKSLVNTELWDMVRQSYPERCGRRLEQR
DRVMASEDVFCSPIQICKPGDMRHEYEKQKNKMMMDEETEERMKKLPCRKKGESGHQHSQ
DTSLGVLSDSENEEPMRLRTRHASAFVRRSRISPALCRSLYISVQRSQSCTDSEEGRRKV
RAQSHLSLPEKASISHSFNAGILLSSENSRSFSAPVLPLDKRHHWRSILASPPSSLVPHT
KPERSVSPESNDSISEELNHFKPIVCSPCTPPKRLPDGRLMEPTIVKSTPRNLTHSLHKS
TSYEASPSILQKWKQVELDRQRVKFLSKGTITSPVVDDCNITQSSQEDQENKSCNCGPME
KGLQGQHCTCTANTNLSRKQREKSLLCNKRQLIFDQCSRDDGSQSTNAHPTLLALGNSDT
PNQCSACEPHCSPSGRVENLKSPIVDKHMGVNHNQGIEDLQDLRNEPTVRSCVLNRPTSR
RGKKRSQKTKHLEETKRIKISKIDSCDSCDPQCRQNDLYVERLRQERMDRELALKLQRQF
DKEGQKVERHRMSSDKYLLRSWICVDGRAARNPRRSGRISRKIKHFN
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggggtgcgccgggtctgtcagcggactgggacagcaggctaaagcgagg
cctggagccgtttctaatcaccgtcatgtgcgctgtcttactctggaggaagctcggtgt
ccggtttgcttggagatactgctggagcccgtgactatgccgtgtagacactcggtttgc
ctccactgttttaagcggacggtggagtgtagcgggctgtgctgcccgtcgtgccggctg
cgcgtgtccagctgggcccgaaataaacagtcccgggagaaaagcctcgtcaacaccgag
ctgtgggacatggtgcgccaaagctatccggaaagatgcggccgtagattagagcagagg
gaccgagtgatggcttcggaagatgttttctgttcacctatacagatatgtaagcctgga
gatatgcggcatgagtatgagaaacaaaagaataagatgatgatggatgaagaaactgaa
gagagaatgaaaaaattaccctgccgtaagaaaggggaaagtggacatcagcattctcag
gatacttctttaggagtgctgtcagactctgagaatgaagaacctatgagattgagaacc
aggcatgcatcggcatttgtgcgcagatcaaggatttccccagctttatgcagaagtctg
tacataagtgtacaaaggagccaaagctgtactgactctgaggaaggaagaagaaaagtc
agagctcagtcacacctttctttaccagaaaaagccagtatctctcatagtttcaatgct
ggaatactcctatcctctgagaacagtcgttccttctcagcaccggttcttccccttgac
aagaggcatcactggcgttccatcttggcctctcctccttcctctttagtgcctcacact
aaacccgagcggtccgtcagcccagagagcaacgacagcatctcagaagagctgaaccac
ttcaagcctatagtttgctcaccatgcacaccaccgaagagactcccagatggccggtta
atggaacccaccatagtaaagtccacgcccaggaacctgacccacagcctacacaaaagc
accagctatgaagccagtcctagcatcctgcagaagtggaagcaggttgagctagatcgg
cagcgcgttaagttcttgtccaaaggaaccattaccagtccagtggtagatgattgcaac
attacacagagctctcaagaagaccaagagaacaaatcctgtaactgtggccccatggaa
aaaggcttgcagggtcaacattgcacttgtactgcaaatacaaacttgtctagaaagcag
agagaaaagtctttgctgtgcaataagcggcagttgatttttgatcagtgtagcagagat
gatggctcacagtctacaaatgcacatcctacattgctggcacttggtaattctgatact
cctaatcagtgtagtgcttgtgaaccacattgttcaccttcaggacgagttgaaaacttg
aaatcacccatagtggacaaacatatgggagtaaatcataatcagggtatagaggacctt
caagacttaaggaatgagcccactgtcagaagttgtgtacttaacagacctacctcaaga
aggggcaaaaagagaagccagaagaccaaacatttagaagagactaagaggataaaaata
tccaagatagatagttgtgatagctgtgacccacagtgtagacaaaatgatttatacgtt
gaacggctccgtcaagaaagaatggacagagaactggcactaaagctacaaagacagttt
gacaaagaaggccagaaagtagaaaggcataggatgagttctgataaatatcttctacga
tcttggatttgtgtagatggtagagcagctcgtaatccacgcaggtcaggaaggatttct
aggaagataaaacactttaattaa
DBGET
integrated database retrieval system
