Pangasianodon hypophthalmus (striped catfish): 113539207
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Entry
113539207 CDS
T05759
Symbol
pds5b
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B
KO
K11267
sister chromatid cohesion protein PDS5
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
113539207 (pds5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113539207 (pds5b)
03400 DNA repair and recombination proteins [BR:
phyp03400
]
113539207 (pds5b)
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
113539207 (pds5b)
DNA repair and recombination proteins [BR:
phyp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
113539207 (pds5b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
betaPIX_CC
EnP1_C
Motif
Other DBs
NCBI-GeneID:
113539207
NCBI-ProteinID:
XP_026790635
LinkDB
All DBs
Position
Unknown
AA seq
1413 aa
AA seq
DB search
MAHSKNRATDGKITYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDT
KSAQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFQVINNGHNQKVHMHMVDL
MSSIVCEGDSVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQV
LMLGKTSVSDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNDERLQVVKLLAKMF
GAKDSELASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLKVRSH
DPEEAIRHDVIVSIVTASKKDLSLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYA
LQAEAGKEAAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETAERMKCLYYL
YATLDSNAVKALNEMWKCQNMLRHHVKDLLDLVKQPKSDSYNKAVFSKVMVITRNLPDPG
KAQDFVKKLAQVLEEDEKIRKQLETLVSPSCSCKQAEVCVKEITKKLGSPKQPSNPFLEM
VKFLLERIAPVHIDTESISALIKQVNKSIEGTADDDDEGVPTEQAIRAGLELLKVLSFTH
PVSFHSAETFESLLGCLKMDDEKVAEAALQIFKNTGGKLEESFPHIKSVLLPVLQHKAKK
GPPRQAKYAIRCIHAMFSNRDTHFAQIFEPLHKSLDTENMEQLITPLTTLGHLAMLAPEQ
FAGPLKSLVANFIVKDLLMNDRIPGKKTTKLWVPDDEVSPETLAKIQGIKLMVRWLLGVK
NNQSKSGNSTLRMLTAILNSDGDLTEQGKMGKPDMSRLRLAAGCAVLRLAQEPCYHEIIT
LEQYQLCALVINDECYQVRQAFAQKLHKGLCRLRLPLEYLAVFALCAKDPVKERRAHARQ
CLVKNINLRREYIKQHAAVSEKLISLLPEYVVPYAIHLLAHDPDYVKVQDIEQLKDIKEA
LWFILEILMAKNENNSHAFIRKMVENIKQTKDGQCPDDPKMNEKLYTVCDVAMNIVISKS
TTYSLESPKDPVLPARYFTQPDKNFSNTKNYLPPEMKSFFTPGKPKSANVLGAVNKPLSA
TGKLQTKLSRMETISNASSNSNPSSPGRSKGRMDSADVDHSENEDISMKSPSEGDKPTRG
RKRGAATGQEDKAPEPKAKRGRKKAANTSTEDTEEQWTEDSSIVDTTMETEDEQNSPPKR
GRRGRPPKSAAAKEETAASKGRRGRRKAAPPPDEDNDDEQEAEEEDEEEDRGSENMEEVK
PRGRRGRKPRAEVSEVTSDSVESTPQKRRGRPPKSQTAAKKAGGGRSRAAVSQEDESEEE
METSQHSDEEAEEEQSQDSSPKVRRKAGRRERR
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atggctcactccaagaatcgagccacagatggcaagatcacctacccgccgggggtgaag
gagatctccgataaaatctccaaggaggagatggtccggaggctcaagatggtggtgaag
accttcatggacatggaccaagattcagaggaggagaaagagctgtacctgaacctcgct
ctgcacctggcctcagacttcttcctgaagcacccagacaaagacgtcaggctcctggtg
gcctgctgcctggccgacatcttccgtatctacgctccagaggctccctacacgtcgccg
gataagctgaaggatatatttatgttcataacacgacagctgaaaggattggaggacact
aaaagcgcccagttcaatcgatatttttacttactggagaatatcgcttgggtgaaatcc
tataacatctgcttcgaattggaggacagcaatgaaatatttactcaactgtacagaaca
ctcttccaagtaatcaataatggacacaatcagaaggtgcacatgcacatggtagacctg
atgagctcgatcgtgtgtgagggagactctgtttctcaggagctcctggacaccgtcctg
gtcaacttagttccagcacacaagaatctgaacaagcaggcgtacgacctggccaaagcg
ctgctgaagagaaccgcgcaggccatcgagccgtacataaccaacttttttaaccaggtg
ctgatgctggggaagacgtcagtgagcgacctgtcagagcacgtgtttgatttaatcctg
gagctctacaacatcgacagccatctactcctgtctgttctgcctcagctggagtttaaa
cttaagagtaacgataatgacgaacggcttcaagttgtcaagcttttggccaagatgttt
ggcgctaaggactcggagctcgcctcccagaacaaacctctgtggcagtgctacctcggg
aggttcaacgatatccacgttcctattcgactggagtgtgtgaagtttgccagccactgc
ctgatgaatcatccggatttggctaaagatctcacagagtatctcaaagtgagatctcac
gatccagaggaagccattcggcatgacgtcatcgtgtccattgtgactgcgtcgaagaaa
gacctctctctcgtcaacgatcacttgctgaactttgtcagagagaggacgctcgacaag
cggtggagggtgcgtaaggaagcgatgatgggcctcgcacagatctataagaagtacgct
ctgcaggcggaggcggggaaggaagcagccaaacagatatcctggattaaagacaaactg
ctgcatatctactaccagaacagtatcgatgaccgtctgcttgtggagagaatctttgcc
cagtacatggtgcctcataatctggagactgcagaacggatgaagtgtctgtattacctg
tatgctacgctggattctaacgcagtaaaagccctgaacgaaatgtggaagtgtcagaac
atgctgcgacaccatgtcaaagatttgttggatctggttaaacagccgaaatcggactcc
tacaacaaagcggtcttctcaaaggtcatggtcatcacaagaaacttgcctgacccaggg
aaggcgcaggactttgtgaagaagctggcgcaggttctggaggaggatgagaagatcagg
aagcagctggagacgctggtcagcccgtcctgttcctgcaaacaggccgaggtctgcgtg
aaagagatcacaaagaaactgggcagccccaaacagcccagcaaccctttcctagagatg
gtgaagttcttactggagaggatcgctcccgtccatatcgacacagagtcaatcagtgca
cttataaaacaggtgaacaagtccatagaaggaacagcggatgatgatgatgaaggtgtt
cccacggagcaggccattagggctgggctggagctgctcaaggttttgtcctttactcac
cccgtgtccttccactcagctgagacgttcgagtctctgctcggctgtctgaaaatggac
gacgagaaggtggcggaggcagcactgcagatctttaaaaataccggcggaaaactggag
gagagcttcccacacatcaaatcggttcttttaccggtactacaacacaaagccaagaag
ggacctcctcgccaggccaagtacgccatccgctgcatccacgccatgttctccaacaga
gacacccactttgcacagattttcgagcctctgcataaaagtctggacacggagaacatg
gagcagctgataactcctctcactacgctgggtcacttggctatgctggcacccgagcag
ttcgccgggccgcttaaatcactagtggccaacttcattgtgaaagatctgctaatgaac
gacaggattcctggcaagaaaacgaccaagctctgggttccagatgatgaagtttcccct
gaaacactggcgaagattcagggcattaagctgatggtgaggtggctgctcggagtgaag
aataaccagagcaagtcgggtaactccacgctgaggatgctcactgccatactgaacagt
gatggagatctgactgaacagggcaagatggggaagccggacatgtcacgtctgcgcctg
gcggcgggctgcgcggtgctgcgtctggctcaggagccttgctaccatgagatcatcacc
ctggagcagtaccagctttgtgctcttgtcatcaacgatgagtgttaccaggtgcgtcag
gcttttgctcagaagctgcacaagggcctgtgtcggctgcggctgccgctggagtacctg
gcagtgttcgctctttgcgccaaagacccggtgaaggagcgcagggctcacgctcgccag
tgcctggtcaaaaacatcaacctgcgcagggagtacatcaagcagcacgccgcagtcagc
gaaaagctgatctccctcctgccggaatatgtggtgccgtacgccatccacctgctggct
cacgacccggactacgtcaaagtacaagacatagagcagctcaaagacatcaaggaggct
ttatggtttattttggagatcctaatggcaaaaaatgagaacaacagtcatgcgttcata
agaaaaatggtagagaacatcaaacagacaaaagatggccagtgtccagatgatccgaag
atgaacgagaaactctacacagtgtgcgatgtagccatgaatatcgtcatctccaagagc
accacgtacagcctggagtcaccgaaagaccccgtactgcctgcgcgctactttacccaa
cctgacaagaatttcagcaacacaaaaaattatcttcctcctgagatgaagtcatttttt
acccctgggaagcctaaatcagcgaacgtactcggagccgtgaacaaaccgttatcagct
acaggcaagctgcagaccaaactctctcgcatggagaccatcagcaacgccagcagcaac
tccaatcccagctcgccgggccgcagcaaaggaagaatggactctgctgatgtggaccac
agcgagaacgaggacatctccatgaagagcccgtctgaaggagacaagcccactagggga
cgcaagcgaggagccgcgactggacaggaggacaaggccccggagccgaaagccaaacgc
ggccgcaagaaagcagccaacaccagcacggaggacacagaggagcagtggacggaggac
agcagcattgtcgacacaaccatggagacagaggacgagcagaacagcccgcccaagagg
gggcgccggggacgacctcccaaatccgccgccgccaaagaagaaaccgccgccagcaag
gggaggagaggacgcaggaaggccgcgccgccgccggacgaggacaacgacgacgagcag
gaggcagaggaggaggacgaggaagaagatagaggcagtgaaaatatggaggaagttaag
cctagaggcaggcgaggacgcaaaccgagagcggaagtgtcagaggtcaccagcgattct
gtcgagtccacgccacagaaaagaagaggacgacctccgaaatcacaaacggcagctaaa
aaagcaggaggtggaaggtcccgagcagcagtgagccaagaggacgagtctgaggaggag
atggagacgtcgcagcatagtgatgaggaggcagaagaggagcagtcacaggactcctca
cctaaagtgcgacggaaggctggaaggcgagagcggagatga
DBGET
integrated database retrieval system
