Pangasianodon hypophthalmus (striped catfish): 113539304
Help
Entry
113539304 CDS
T05759
Name
(RefSeq) histone deacetylase complex subunit SAP130-like isoform X1
KO
K19192
histone deacetylase complex subunit SAP130
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113539304
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
113539304
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAP130_C
Motif
Other DBs
NCBI-GeneID:
113539304
NCBI-ProteinID:
XP_026790802
LinkDB
All DBs
Position
Unknown
AA seq
998 aa
AA seq
DB search
MSSQQYQRAGLNPAHTQAANTPGVQTKQTTSGHEDGGRDSGLASSSSAAAPLRDDKQEPV
VVRPYGATSSAPPSLPQHIPVTFTEGPGKVQSALKTPIPSRVIAPAPAQGHLALPHKVPG
HLTVENAMPQASGIPVATISGQQGHTGNLHRIMATNLQIIRSGTPALQIGSSAAPQHQFP
SHLPRGAAAAAVMSSSKGATVLRPASGPNSAAGQPTVQHIIHQPIQSRPIVTTSTAVLPT
VVAPVAATRPQSPVISTVTAHSGELVHGRSATLSTLATLSIQRAPHARDTPTRITLPSHP
AIGAQKPLPHSLAQKPIFSTVTPVAAATVAPILATNTVPSTSTTGSMTQSQVSSSNIGTV
TMASHSTHATAVTTSTIPVAKVVPQPITHTSPRIQSEFSGERGNLIPISAHRASPNPAAA
MENRSDARQSVPMQIQYFLPTYQSASYPLSHPYTSITSSVSTIRPYPVTAQAPSAAQPSM
GVASAVHLNSMQLMTVDRIAQINTQNMQPAAVAAQGGQNAAIAAQGLHTNAPITPQSIQA
APINPQQNPSEAKTSVVLADGSALVANSINSTFNANQPVATVTQAHSQGGGSGTPALVSS
PRPSILRKKPAIDGTAVRKNLMAAHLGDSARMDGGLRNAAGSPRPAGVKPKPDVLMGLAP
PVSTAVDAVSGQSGEQNVAPPSSQIPAQPVSALLASVTPPSQPVPAAMAVTPPIPSMANV
VAPPSHPAASSTAACAVSSALPEIKQEAAPMDTSKPVTPAPPSGTPALSVPAADLTPGAS
PRKKPRKQQHVISTEESEMMETNSTDEEKPPAKPVSHRPEKRKSPPKEYIDEEGVRYVPV
RIRPPVTLLRHYRNPWKAAYHHFQRYSDVRVKEEKKGSLQDVANQKGVVCRAQGWKIHLC
AAQLVQLTNLEHDVYSRLTSLQEGLIPKKKAAADDDLHRISELIQGNMQRCKLVMDQITE
AREAMMKVLDHRERVLKLLNKNSTTKKLHKLHKRKDRA
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgagttcacagcagtatcagcgagcaggactgaatcccgcacacacacaggcagcaaac
acaccgggggtccaaaccaagcagaccacctcaggtcatgaggacggtgggcgtgactcg
ggtctcgcttcttcgtccagcgccgcagctcccctcagagacgacaagcaggagccggtg
gtggtgcgaccgtatggagcgacgtcctccgcccctccgtcactgcctcagcacatccct
gtcaccttcaccgagggacctggaaaggtacagtctgctctgaagactcctattcctagc
cgtgtaatcgccccagccccggctcaggggcatctcgccctaccccacaaagtaccggga
cacctcaccgtggagaacgccatgccgcaggcgtccgggatcccagtggccaccatcagc
gggcagcagggtcacactggaaacctgcaccgcatcatggccaccaatttgcagattatc
cgtagcgggactccggcactgcagatcggatcctcggccgcgccgcagcatcagtttccc
tcacatttacccagaggagctgcggccgctgctgtgatgtccagttcaaagggagcgact
gtgttgagaccggcgtcgggaccgaacagcgccgcgggacagccgacggtccagcacatc
atccaccagcccattcagtcacgtccgatagtcaccacgtccacggcggtcctgcccacg
gtcgtggctccggtcgcggccaccaggcctcagtctcctgttattagcacggtgacggct
cactcaggagaattagtgcacggacgctcagctaccctgagtaccctagctaccctgagt
atccagcgggctcctcacgctcgggacacgcccacccgcatcacacttccgtcccaccca
gctatcggcgctcagaagcccctcccacactccttggcacagaaaccaatctttagcacc
gtgacgcctgtcgccgcggcaactgtggcccccatactggccaccaacacggttccatca
acatcaactacaggctccatgacccagtcccaggtgtccagcagtaacataggtacagtg
acgatggcctctcattccactcacgccactgcagtgaccacctccaccatccccgtggca
aaggtggtgccccagccgatcacacacacctctcctcgaatccagtctgagttcagtgga
gaaagagggaacctcatccccatctcagctcatcgcgcttcccctaatcctgctgctgct
atggagaaccgcagtgacgccaggcagtctgttcctatgcagattcagtacttcctgcca
acctaccaatcagcttcttaccctctttcacacccctacacatccatcaccagctcggtg
tccactatacgcccctatccagtgacggctcaggctccgtctgctgctcagcccagcatg
ggcgtggcctccgctgtccatctaaactccatgcagctgatgacggtggatcgcatcgct
cagatcaacacgcagaacatgcagccggcggccgtggcagcacagggaggccaaaacgca
gccatcgccgctcaggggcttcacaccaacgccccgatcacaccgcagagcatccaggct
gctcccatcaacccccaacaaaacccaagtgaggccaagacttcagtggtgctggccgac
ggctcggctctggtcgccaactccatcaacagcacctttaacgccaatcagcccgtcgcc
acggtaactcaggcgcactcacagggaggcggatcagggacgccggcgctagtctcgtct
cctcgacccagcattctccgcaaaaaacccgccatcgatggcactgctgtgaggaaaaat
ctgatggcagctcatctcggtgactctgccaggatggacggaggtctgaggaacgctgca
ggatcgccacgacccgctggagtaaaacccaaacccgatgtcctcatgggtttggctcct
cctgtcagcactgcagtggacgccgtctctggacaaagcggcgagcagaacgtagccccg
ccttcttctcaaatccccgcccagcccgtctccgcccttctggcttcagtcacgcctcct
tctcagcccgtccctgctgccatggctgtgactccgcccatcccttcaatggccaacgtg
gtggcgccgccttctcacccagcagccagtagtactgcggcttgtgccgttagctccgcc
cttccagaaattaagcaggaggcggcgcccatggacacctcaaaaccagtgactccagcg
ccacctagtggcactcctgccctgtcagtcccggctgcagatctcacgcccggagcttca
cccaggaaaaagccccggaagcagcagcacgtcatctccaccgaggagagcgagatgatg
gagaccaacagcacagacgaggagaaacctcccgctaaacccgtcagccaccgacccgag
aaacgcaaatctcctcctaaagagtacatcgatgaggaaggtgtgcggtacgttcctgtc
cgaatccgtcctccggtcactcttctgcgtcattaccgtaacccctggaaagctgcttat
catcacttccagagatacagtgacgtccgggtcaaagaggagaagaaaggcagcctgcag
gatgtggccaatcagaagggagttgtgtgtcgagctcaaggctggaagatccatctgtgt
gctgctcagctggtgcagctgacgaatctggagcacgatgtctacagccgtttaacgagt
ctacaggaaggtctcatccccaagaaaaaagccgcagcagacgacgatctacaccgcatc
agtgagctcatacagggtaacatgcagcgctgtaagctggtgatggatcagatcacggag
gctcgcgaggccatgatgaaggtgctggaccacagagagcgagtcctcaaactcctcaat
aagaacagcaccaccaagaagctccacaagctccacaaacgtaaagacagagcgtga
DBGET
integrated database retrieval system
