Pangasianodon hypophthalmus (striped catfish): 113539406
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Entry
113539406 CDS
T05759
Name
(RefSeq) TBC1 domain family member 15-like
KO
K20168
TBC1 domain family member 15
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
113539406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113539406
Membrane trafficking [BR:
phyp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
113539406
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
ProQ
ADK
DUF3970
Motif
Other DBs
NCBI-GeneID:
113539406
NCBI-ProteinID:
XP_026790956
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MECTGSHTVSSPRDASSLEGKITFGSVWEENSNRESGISQMGKSLTTDSGMPHVSRVAPV
TSPTSASQRVNLPGVMDAEGRVDESRLRMYIFKNGGVSPDERGLVWRFLFGMYPCSTTTL
ERTLLLEEMSVRYSVMKRKWQCLLPGAVRLRLNGTDAELVAAVQHFEQRQEREREIQQYQ
YKSKEVRERISFLELQAQVIFERVTFDLEELQEAIRIIDKDVPRTDRGLAYYKDEGLGNL
LVLRDILTTYAAFHPEVSYAQGMNDLCSRFLEVLDSEVDTYWSFCCYMEKFSRDFCADGL
HRKIELEAALLKELDPHLHAHLVTDNMDRLTFCHRWLLLGFQREFEHSDALRLFEILSCD
HLELISQQVDRARYQERLAYKHSLQDEPVTGPKSINREFTFELFICATILLENRDSLLSC
RNEVQLLQFTNSLQGTLDLNSSLKKAEEHFYNYCKRSARDCLSERYRRHKSKEEPFLYQL
RNLFS
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggagtgcacgggttcacacacggtcagctcacctcgtgatgcgtcctcgttggagggg
aaaattacattcggctcggtgtgggaagaaaacagtaacagagaaagtggcatttctcag
atgggaaagtcactgacaactgacagcgggatgccccacgtgtcacgtgtcgcccccgtg
acgtcacccacatccgcctcgcagcgcgtgaatctgcccggtgttatggacgcagagggg
agagtggatgagtccagactgcggatgtacatatttaaaaatggcggtgtgtctccagat
gagcgaggcctggtgtggcgcttcttatttggaatgtacccgtgcagcactacaactctg
gagcgcaccctgttgctggaagagatgtcagtacgttacagtgttatgaaaaggaagtgg
caatgtctgcttcctggagctgttcgtcttcgtcttaatggcactgatgctgagctggta
gcagcagtgcagcattttgagcagagacaggagagagaaagagaaatacagcagtaccag
tacaagtcaaaagaggtcagggaaaggatttctttcctggagcttcaggcacaggtcata
tttgaacgggtgacttttgacctcgaagaacttcaggaggctatacgcatcattgacaaa
gatgtcccgagaactgatagaggcctggcctactacaaggacgaaggcctgggtaatcta
ttggtgctgagagatatcctgaccacctatgctgctttccacccagaggtcagttatgcc
cagggtatgaatgatctgtgcagtcggttcctggaggttctggattcagaggtggacaca
tactggagcttttgctgttacatggaaaaattttcaagagacttctgtgctgatggcctg
caccgcaaaattgaattggaggcagctttgctaaaggagttggaccctcatcttcatgct
catcttgtaacagataatatggacagactgacattctgtcacaggtggctgctgctgggt
ttccagcgcgagtttgagcacagtgatgctctccggctgtttgagattctcagctgtgat
catctggagctcatttcccagcaggtggaccgggcacgctaccaggagagactggcctac
aaacacagccttcaggatgagccagtgacaggacctaagtccattaacagagagttcacg
tttgagctcttcatctgtgccaccattctgctggagaacagagattcactgctcagctgc
agaaatgaggtccagctcctgcagttcacaaacagtctgcaggggactctggatttgaac
agcagcctgaagaaagctgaggagcatttctacaattactgtaagcgctcagccagggat
tgcctgagtgagcgctaccggagacacaagagcaaagaggagcccttcctctaccagcta
cgcaacctgttctcctga
DBGET
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